FFCP PHASE1:Hg19::chr3:169482605..169482616,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr3:169482605..169482616,-
|short_description=p5@TERC
|description=CAGE_peak_5_at_TERC_5end
|association_with_transcript=218bp_to_ENST00000363312_5end
|Entrez...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=11727 | |HGNC=11727 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=218bp_to_ENST00000363312_5end | |||
|cluster_id=chr3:169482605..169482616,- | |||
|coexpression_cluster_id=C591 | |||
|description=CAGE_peak_5_at_TERC_5end | |||
|id=chr3:169482605..169482616,- | |||
|ontology_enrichment_celltype=CL:0002521!8.83e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002521;3.94e-34;3!CL:0000062;4.42e-12;9!CL:0002567;1.67e-09;3!CL:0000136;1.13e-08;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0002521,3.94e-34,3;CL:0000062,4.83e-10,11;CL:0000375,4.83e-10,11;CL:0000335,4.83e-10,11;CL:0002567,1.54e-09,3;CL:0000136,1.22e-07,15 | |||
|ontology_enrichment_development_v019=CL:0000335;4.62e-10;11 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5093;1.92e-07;4!DOID:1612;1.92e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,1.92e-07,4;DOID:1612,1.92e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0002190!8.83e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002190;3.94e-34;3!UBERON:0002072;6.01e-21;5!UBERON:0001013;4.04e-08;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002190,3.94e-34,3;UBERON:0002072,6.01e-21,5;UBERON:0001013,4.04e-08,14 | |||
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| ||
|short_description=p5@TERC | |||
}} | }} |
Latest revision as of 14:50, 16 September 2015
Short description: | p5@TERC |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_TERC_5end |
Coexpression cluster: | C591_Adipocyte_Hair_heart_left_Osteoblast_skin_Hepatocyte |
Association with transcript: | 218bp_to_ENST00000363312_5end |
EntrezGene: | NA |
HGNC: | 11727 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
subcutaneous fat cell | 3.94e-34 | 3 |
osteoblast | 4.83e-10 | 11 |
osteoprogenitor cell | 4.83e-10 | 11 |
mesenchyme condensation cell | 4.83e-10 | 11 |
light melanocyte | 1.54e-09 | 3 |
fat cell | 1.22e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
subcutaneous adipose tissue | 3.94e-34 | 3 |
hypodermis | 6.01e-21 | 5 |
adipose tissue | 4.04e-08 | 14 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 1.92e-07 | 4 |
breast cancer | 1.92e-07 | 4 |