FFCP PHASE1:Hg19::chr3:156807773..156807794,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr3:156807773..156807794,+
|short_description=p3@LOC100498859
|description=CAGE_peak_3_at_LOC100498859_5end
|association_with_transcript=103bp_to_ENST000004679...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=100498859 | |EntrezGene=100498859 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=103bp_to_ENST00000467995,ENST00000471719,ENST00000474477,NR_034008_5end | |||
|cluster_id=chr3:156807773..156807794,+ | |||
|coexpression_cluster_id=C56 | |||
|description=CAGE_peak_3_at_LOC100498859_5end | |||
|id=chr3:156807773..156807794,+ | |||
|ontology_enrichment_celltype=CL:0000738!4.32e-23!140;CL:0002031!7.06e-19!124;CL:0000988!1.16e-18!182;CL:0002032!3.51e-18!165;CL:0000837!3.51e-18!165;CL:0000037!4.79e-18!172;CL:0000566!4.79e-18!172;CL:0002087!1.29e-17!119;CL:0002057!1.52e-13!42;CL:0000557!2.26e-13!71;CL:0000766!7.25e-13!76;CL:0000860!4.03e-12!45;CL:0002009!4.65e-12!65;CL:0000839!1.58e-11!70;CL:0000763!2.14e-11!112;CL:0000049!2.14e-11!112;CL:0002194!1.50e-10!63;CL:0000576!1.50e-10!63;CL:0000040!1.50e-10!63;CL:0000559!1.50e-10!63;CL:0000453!1.57e-07!5;CL:0000542!4.75e-07!53;CL:0000051!4.75e-07!53 | |||
|ontology_enrichment_celltype_v019=CL:0000767;4.82e-15;3!CL:0001014;2.09e-10;2!CL:0001016;2.09e-10;2!CL:0000081;3.16e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000767,4.17e-15,3;CL:0000738,3.78e-12,136;CL:0000988,1.43e-11,177;CL:0001014,1.42e-10,2;CL:0001016,1.42e-10,2;CL:0002031,3.31e-10,120;CL:0002032,1.55e-09,161;CL:0000837,1.55e-09,161;CL:0000037,6.02e-09,168;CL:0000766,1.57e-08,72;CL:0000557,7.33e-08,67;CL:0000081,2.86e-07,11;CL:0000763,8.80e-07,108;CL:0000049,8.80e-07,108 | |||
|ontology_enrichment_development_v019=UBERON:0005062;3.12e-12;4!UBERON:0007284;3.12e-12;4!UBERON:0004140;9.90e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:114;1.67e-11;2 | |||
|ontology_enrichment_disease_v019_2=DOID:114,1.63e-11,2 | |||
|ontology_enrichment_uberon=UBERON:0002390!9.75e-13!102;UBERON:0003061!9.75e-13!102;UBERON:0002371!1.01e-10!80;UBERON:0002193!1.69e-10!112;UBERON:0001474!2.68e-09!86;UBERON:0007100!2.01e-08!27;UBERON:0003081!6.32e-08!216;UBERON:0002405!2.86e-07!115;UBERON:0004765!3.71e-07!101;UBERON:0001434!3.71e-07!101 | |||
|ontology_enrichment_uberon_v019=UBERON:0004151;3.19e-16;3!UBERON:0003978;3.82e-16;3!UBERON:0000946;3.82e-16;3!UBERON:0007100;2.20e-15;25!UBERON:0002331;1.38e-12;10!UBERON:0002081;2.22e-11;2!UBERON:0002133;2.65e-11;2!UBERON:0000948;5.49e-08;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004151,2.55e-16,3;UBERON:0003978,3.12e-16,3;UBERON:0009751,3.12e-16,3;UBERON:0000946,3.12e-16,3;UBERON:0002523,3.12e-16,3;UBERON:0005983,3.12e-16,3;UBERON:0002165,3.12e-16,3;UBERON:0002062,3.12e-16,3;UBERON:0007280,3.12e-16,3;UBERON:0007100,3.72e-14,27;UBERON:0002331,1.41e-12,10;UBERON:0000358,1.41e-12,10;UBERON:0000307,1.41e-12,10;UBERON:0000091,1.41e-12,10;UBERON:0000087,1.41e-12,10;UBERON:0007010,1.41e-12,10;UBERON:0007806,1.41e-12,10;UBERON:0008780,1.41e-12,10;UBERON:0005728,1.41e-12,10;UBERON:0002081,1.81e-11,2;UBERON:0010227,1.81e-11,2;UBERON:0002133,2.11e-11,2;UBERON:0002390,3.76e-09,98;UBERON:0003061,3.76e-09,98;UBERON:0003081,1.13e-08,203;UBERON:0002193,5.25e-08,108;UBERON:0000948,2.75e-07,24;UBERON:0005498,2.75e-07,24;UBERON:0004140,2.75e-07,24;UBERON:0009881,2.75e-07,24;UBERON:0004141,2.75e-07,24;UBERON:0003084,2.75e-07,24;UBERON:0007005,2.75e-07,24;UBERON:0004139,2.75e-07,24;UBERON:0004291,2.75e-07,24;UBERON:0004797,3.33e-07,7 | |||
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|short_description=p3@LOC100498859 | |||
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Latest revision as of 06:58, 16 September 2015
Short description: | p3@LOC100498859 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_LOC100498859_5end |
Coexpression cluster: | C56_heart_left_umbilical_skeletal_penis_diaphragm_tongue |
Association with transcript: | 103bp_to_ENST00000467995, ENST00000471719, ENST00000474477, NR_034008_5end |
EntrezGene: | LOC100498859 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
basophil | 4.17e-15 | 3 |
leukocyte | 3.78e-12 | 136 |
hematopoietic cell | 1.43e-11 | 177 |
CD1a-positive Langerhans cell | 1.42e-10 | 2 |
immature CD1a-positive Langerhans cell | 1.42e-10 | 2 |
hematopoietic lineage restricted progenitor cell | 3.31e-10 | 120 |
hematopoietic oligopotent progenitor cell | 1.55e-09 | 161 |
hematopoietic multipotent progenitor cell | 1.55e-09 | 161 |
hematopoietic stem cell | 6.02e-09 | 168 |
myeloid leukocyte | 1.57e-08 | 72 |
granulocyte monocyte progenitor cell | 7.33e-08 | 67 |
blood cell | 2.86e-07 | 11 |
myeloid cell | 8.80e-07 | 108 |
common myeloid progenitor | 8.80e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
cardiac chamber | 2.55e-16 | 3 |
valve | 3.12e-16 | 3 |
cardiac mesenchyme | 3.12e-16 | 3 |
cardial valve | 3.12e-16 | 3 |
tunica intima | 3.12e-16 | 3 |
heart layer | 3.12e-16 | 3 |
endocardium | 3.12e-16 | 3 |
endocardial cushion | 3.12e-16 | 3 |
presumptive endocardium | 3.12e-16 | 3 |
primary circulatory organ | 3.72e-14 | 27 |
umbilical cord | 1.41e-12 | 10 |
blastocyst | 1.41e-12 | 10 |
blastula | 1.41e-12 | 10 |
bilaminar disc | 1.41e-12 | 10 |
inner cell mass | 1.41e-12 | 10 |
cleaving embryo | 1.41e-12 | 10 |
connecting stalk | 1.41e-12 | 10 |
inner cell mass derived epiblast | 1.41e-12 | 10 |
extraembryonic mesoderm | 1.41e-12 | 10 |
cardiac atrium | 1.81e-11 | 2 |
future cardiac atrium | 1.81e-11 | 2 |
atrioventricular valve | 2.11e-11 | 2 |
hematopoietic system | 3.76e-09 | 98 |
blood island | 3.76e-09 | 98 |
lateral plate mesoderm | 1.13e-08 | 203 |
hemolymphoid system | 5.25e-08 | 108 |
heart | 2.75e-07 | 24 |
primitive heart tube | 2.75e-07 | 24 |
primary heart field | 2.75e-07 | 24 |
anterior lateral plate mesoderm | 2.75e-07 | 24 |
heart tube | 2.75e-07 | 24 |
heart primordium | 2.75e-07 | 24 |
cardiac mesoderm | 2.75e-07 | 24 |
cardiogenic plate | 2.75e-07 | 24 |
heart rudiment | 2.75e-07 | 24 |
blood vessel layer | 3.33e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
heart disease | 1.63e-11 | 2 |