FFCP PHASE1:Hg19::chr3:156807693..156807705,+: Difference between revisions
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|id=chr3:156807693..156807705,+
|short_description=p2@LOC100498859
|description=CAGE_peak_2_at_LOC100498859_5end
|association_with_transcript=23bp_to_ENST0000046799...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=100498859 | |EntrezGene=100498859 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=23bp_to_ENST00000467995,ENST00000471719,ENST00000474477,NR_034008_5end | |||
|cluster_id=chr3:156807693..156807705,+ | |||
|coexpression_cluster_id=C56 | |||
|description=CAGE_peak_2_at_LOC100498859_5end | |||
|id=chr3:156807693..156807705,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002195;2.77e-08;2!CL:0002571;2.77e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002195,2.48e-08,2;CL:0002571,2.48e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0004140;5.56e-16;1!UBERON:0010226;8.63e-16;1!UBERON:0000358;1.16e-15;1!UBERON:0010227;1.78e-15;1!UBERON:0005062;2.56e-15;4!UBERON:0007284;2.56e-15;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:114;9.30e-30;2!DOID:178;1.16e-15;1!DOID:326;1.16e-15;1!DOID:3978;1.16e-15;1!DOID:3394;1.16e-15;1!DOID:5844;1.16e-15;1!DOID:1287;2.07e-15;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,9.31e-30,2;DOID:178,1.16e-15,1;DOID:326,1.16e-15,1;DOID:3978,1.16e-15,1;DOID:3394,1.16e-15,1;DOID:5844,1.16e-15,1;DOID:1287,2.07e-15,4 | |||
|ontology_enrichment_uberon=UBERON:0007100!1.53e-13!27;UBERON:0003103!4.30e-09!69;UBERON:0000948!7.36e-09!24;UBERON:0005498!7.36e-09!24;UBERON:0004140!7.36e-09!24;UBERON:0009881!7.36e-09!24;UBERON:0004141!7.36e-09!24;UBERON:0003084!7.36e-09!24;UBERON:0007005!7.36e-09!24;UBERON:0004139!7.36e-09!24;UBERON:0004291!7.36e-09!24;UBERON:0003978!8.54e-09!3;UBERON:0009751!8.54e-09!3;UBERON:0000946!8.54e-09!3;UBERON:0002523!8.54e-09!3;UBERON:0005983!8.54e-09!3;UBERON:0002165!8.54e-09!3;UBERON:0002062!8.54e-09!3;UBERON:0007280!8.54e-09!3;UBERON:0002331!8.66e-09!10;UBERON:0000358!8.66e-09!10;UBERON:0000307!8.66e-09!10;UBERON:0000091!8.66e-09!10;UBERON:0000087!8.66e-09!10;UBERON:0007806!8.66e-09!10;UBERON:0008780!8.66e-09!10;UBERON:0005728!8.66e-09!10;UBERON:0004151!8.98e-09!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;2.81e-45;25!UBERON:0000948;4.40e-23;22!UBERON:0003978;4.43e-20;3!UBERON:0000946;4.43e-20;3!UBERON:0004151;5.37e-20;3!UBERON:0002146;7.46e-16;1!UBERON:0005623;7.46e-16;1!UBERON:0002084;8.63e-16;1!UBERON:0002082;8.63e-16;1!UBERON:0002135;1.54e-15;1!UBERON:0002079;1.78e-15;1!UBERON:0002133;2.00e-08;2!UBERON:0002081;2.15e-08;2!UBERON:0003103;5.23e-08;61 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,6.58e-42,27;UBERON:0000948,3.73e-21,24;UBERON:0005498,3.73e-21,24;UBERON:0004140,3.73e-21,24;UBERON:0009881,3.73e-21,24;UBERON:0004141,3.73e-21,24;UBERON:0003084,3.73e-21,24;UBERON:0007005,3.73e-21,24;UBERON:0004139,3.73e-21,24;UBERON:0004291,3.73e-21,24;UBERON:0003978,4.43e-20,3;UBERON:0009751,4.43e-20,3;UBERON:0000946,4.43e-20,3;UBERON:0002523,4.43e-20,3;UBERON:0005983,4.43e-20,3;UBERON:0002165,4.43e-20,3;UBERON:0002062,4.43e-20,3;UBERON:0007280,4.43e-20,3;UBERON:0004151,5.37e-20,3;UBERON:0003103,3.49e-16,68;UBERON:0002146,7.46e-16,1;UBERON:0005623,7.46e-16,1;UBERON:0002084,8.63e-16,1;UBERON:0002082,8.63e-16,1;UBERON:0010226,8.63e-16,1;UBERON:0002135,1.54e-15,1;UBERON:0002079,1.78e-15,1;UBERON:0001009,1.79e-09,112;UBERON:0004797,3.73e-09,7;UBERON:0002133,2.00e-08,2;UBERON:0002081,2.15e-08,2;UBERON:0010227,2.15e-08,2 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0.232429036905685,0,0,0,0.256160706529101,0.236482229888585,0,0,0,0,0.272906150057846,0.224723484445085,0.306083892370903,0.320929027076094,0.639337125799041,0,0.797854630486527,0,0,0.56738522469114,0,0,1.0429658368404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0.201606743224732,0.534880391567015,0,0,1.34140171940727,0.383587685530591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.49333509683432,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0.288239906833923,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.714889968290738,2.17048642156577,0.823240336780769,0,1.42156779497018,0,0,0.871533458600294,0,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464845549297286,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.984678443688556,0,0,0,0,0.887790650732402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189753732724185,0,0,0,0,0,0,0,0,0.593042257361244,0.370691816839509,0.835375596043643,0,0,0,0,0,0,0,1.20990716048664,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.525774708558629,11.7298608534347,19.4786360409931,0.717873024576814,14.1772090354284,41.2057006211108,14.9524876486055,68.8630592988944,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0.0788057072991982,0,0,0,0,6.4322579373603,15.2281153184049,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0.157204305099666,0,0,0,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0,0,0.861074898304078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.80057074828547,0,0.6124909547064,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0.345701962667338,0,0,0,0,0,0.863424021355654,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.971421986118279,0,0,0,0,0,0.452888530700021,0,0,0,0.735444965261716,0,0,0,0,0,0,0,0.299823467774787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318235791390825,0.404234377916439,0,0,0,0,0.665320713092027,0.0814032686109745,0,0,0,14.0784565442073,0.122241444182866,0,0.665756774185513,0,0.320568492303233 | ||
|short_description=p2@LOC100498859 | |||
}} | }} |
Latest revision as of 06:56, 16 September 2015
Short description: | p2@LOC100498859 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_LOC100498859_5end |
Coexpression cluster: | C56_heart_left_umbilical_skeletal_penis_diaphragm_tongue |
Association with transcript: | 23bp_to_ENST00000467995, ENST00000471719, ENST00000474477, NR_034008_5end |
EntrezGene: | LOC100498859 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatic stem cell | 2.48e-08 | 2 |
hepatic mesenchymal stem cell | 2.48e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 6.58e-42 | 27 |
heart | 3.73e-21 | 24 |
primitive heart tube | 3.73e-21 | 24 |
primary heart field | 3.73e-21 | 24 |
anterior lateral plate mesoderm | 3.73e-21 | 24 |
heart tube | 3.73e-21 | 24 |
heart primordium | 3.73e-21 | 24 |
cardiac mesoderm | 3.73e-21 | 24 |
cardiogenic plate | 3.73e-21 | 24 |
heart rudiment | 3.73e-21 | 24 |
valve | 4.43e-20 | 3 |
cardiac mesenchyme | 4.43e-20 | 3 |
cardial valve | 4.43e-20 | 3 |
tunica intima | 4.43e-20 | 3 |
heart layer | 4.43e-20 | 3 |
endocardium | 4.43e-20 | 3 |
endocardial cushion | 4.43e-20 | 3 |
presumptive endocardium | 4.43e-20 | 3 |
cardiac chamber | 5.37e-20 | 3 |
compound organ | 3.49e-16 | 68 |
pulmonary valve | 7.46e-16 | 1 |
semi-lunar valve | 7.46e-16 | 1 |
heart left ventricle | 8.63e-16 | 1 |
cardiac ventricle | 8.63e-16 | 1 |
future cardiac ventricle | 8.63e-16 | 1 |
mitral valve | 1.54e-15 | 1 |
left cardiac atrium | 1.78e-15 | 1 |
circulatory system | 1.79e-09 | 112 |
blood vessel layer | 3.73e-09 | 7 |
atrioventricular valve | 2.00e-08 | 2 |
cardiac atrium | 2.15e-08 | 2 |
future cardiac atrium | 2.15e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
heart disease | 9.31e-30 | 2 |
vascular disease | 1.16e-15 | 1 |
ischemia | 1.16e-15 | 1 |
extrinsic cardiomyopathy | 1.16e-15 | 1 |
myocardial ischemia | 1.16e-15 | 1 |
myocardial infarction | 1.16e-15 | 1 |
cardiovascular system disease | 2.07e-15 | 4 |