FFCP PHASE1:Hg19::chr3:151987420..151987433,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr3:151987420..151987433,-
|short_description=p2@LOC401093
|description=CAGE_peak_2_at_LOC401093_5end
|association_with_transcript=-5bp_to_NR_027037,NR_027038,...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=401093 | |EntrezGene=401093 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-5bp_to_NR_027037,NR_027038,uc011boe.1,uc011bof.1_5end | |||
|cluster_id=chr3:151987420..151987433,- | |||
|description=CAGE_peak_2_at_LOC401093_5end | |||
|id=chr3:151987420..151987433,- | |||
|ontology_enrichment_celltype=CL:0000766!9.35e-19!76;CL:0002057!3.57e-18!42;CL:0000860!8.34e-18!45;CL:0000738!1.48e-17!140;CL:0002009!1.52e-17!65;CL:0000557!3.33e-17!71;CL:0002031!4.35e-17!124;CL:0000839!9.57e-17!70;CL:0002087!1.17e-16!119;CL:0002194!1.21e-16!63;CL:0000576!1.21e-16!63;CL:0000040!1.21e-16!63;CL:0000559!1.21e-16!63;CL:0002320!2.32e-12!365;CL:0000037!4.46e-12!172;CL:0000566!4.46e-12!172;CL:0002032!7.77e-12!165;CL:0000837!7.77e-12!165;CL:0000134!4.38e-11!358;CL:0000763!1.68e-10!112;CL:0000049!1.68e-10!112;CL:0000988!2.15e-10!182;CL:0000048!1.13e-09!430;CL:0000723!7.68e-09!436;CL:0000034!2.89e-08!444;CL:0000219!7.28e-08!390 | |||
|ontology_enrichment_celltype_v019=CL:0000576;3.99e-11;48!CL:0000860;5.74e-11;33!CL:0002057;5.74e-11;33!CL:0000623;1.28e-09;3!CL:0000791;7.17e-09;18!CL:0000789;7.17e-09;18!CL:0002419;7.17e-09;18!CL:0000473;3.17e-08;39!CL:0000234;3.17e-08;39!CL:0000624;5.64e-08;6!CL:0002393;7.83e-08;6!CL:0002397;7.83e-08;6!CL:0002087;1.51e-07;104!CL:0000084;1.83e-07;25!CL:0000738;3.15e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.43e-21,136;CL:0002087,5.03e-21,115;CL:0002031,1.12e-19,120;CL:0000860,9.53e-19,42;CL:0002057,9.53e-19,42;CL:0000473,9.30e-16,48;CL:0000234,9.30e-16,48;CL:0000037,1.84e-15,168;CL:0002032,1.88e-15,161;CL:0000837,1.88e-15,161;CL:0000766,3.49e-15,72;CL:0000988,4.18e-15,177;CL:0002194,6.40e-13,59;CL:0000576,6.40e-13,59;CL:0000040,6.40e-13,59;CL:0000559,6.40e-13,59;CL:0000839,2.36e-12,66;CL:0002009,2.46e-12,61;CL:0000557,4.32e-12,67;CL:0000623,1.16e-09,3;CL:0000825,1.16e-09,3;CL:0000791,8.31e-09,18;CL:0000789,8.31e-09,18;CL:0002420,8.31e-09,18;CL:0002419,8.31e-09,18;CL:0000790,8.31e-09,18;CL:0000838,2.34e-08,52;CL:0002320,2.54e-08,361;CL:0000763,3.79e-08,108;CL:0000049,3.79e-08,108;CL:0000542,3.92e-08,53;CL:0000051,3.92e-08,53;CL:0000134,4.05e-08,354;CL:0000624,7.01e-08,6;CL:0002393,1.76e-07,9;CL:0002397,1.76e-07,9;CL:0000084,2.49e-07,25;CL:0000827,2.49e-07,25;CL:0000048,5.14e-07,427;CL:0000723,9.69e-07,433 | |||
|ontology_enrichment_development_v019=CL:0002057;1.80e-13;42!CL:0000790;7.17e-09;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!5.21e-17!80;UBERON:0002390!1.15e-16!102;UBERON:0003061!1.15e-16!102;UBERON:0001474!1.40e-16!86;UBERON:0004765!7.07e-16!101;UBERON:0001434!7.07e-16!101;UBERON:0002193!8.10e-16!112;UBERON:0002384!7.51e-12!375;UBERON:0002204!1.03e-11!167;UBERON:0002405!6.61e-10!115;UBERON:0003081!1.03e-08!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.97e-12,98;UBERON:0003061,1.97e-12,98;UBERON:0002371,3.61e-11,76;UBERON:0002193,1.15e-10,108;UBERON:0001474,5.81e-10,82;UBERON:0004765,1.19e-09,90;UBERON:0002405,4.42e-09,93;UBERON:0001434,5.27e-09,100;UBERON:0002384,2.63e-08,371;UBERON:0003081,2.08e-07,203 | |||
|phase1_expression=0.363356758541113,0.642301571672949,0.422863212287913,0,0,0,0,0,0.522371256399677,0.245733936501509,0,0,0.263766978228454,0.74259811776028,0.662794751455832,0.672325146451775,0.602694528023977,0,0,0.492484232307152,0.408001382488506,0,0.286235987131057,0,0.251085279189606,0,0,0,1.96682138424452,0,0.619264493264304,0,0,0,0,0,0.293600439334847,2.21598163412751,3.00816671205213,3.68918480216948,0,0.32389366601898,0.257575567634187,1.59938062657521,0.377875943688809,0.485168122375632,3.0215774797739,0.411167888021826,0.929119112685311,0.863077176966451,0.256160706529101,0.945928919554341,3.7922024881028,1.29096936716765,1.35426486594342,0.564727018627814,0.272906150057846,0.449446968890169,1.53041946185451,0.641858054152187,1.91801137739712,0.989553900560148,0,0.426224750532694,4.06292934080018,0.56738522469114,3.11411124497787,1.25624332628372,1.0429658368404,0.65156653411535,1.81619850790011,2.57794345191295,2.84816148696796,0.422510572623884,0.850417199860174,1.46761051855863,0.561643155732475,0.450530678524519,0.16072558669708,0.570025487482497,0.19891667719909,1.0959849225878,0,0,1.77901850772711,0,0,0.574752439954483,0.661044872784862,0,1.1384259382189,1.76171156811282,0.382273228125229,0,0.560508562981536,0.526768169550154,3.34406609193516,3.53709686474248,4.72883447698871,0,0.977766799900771,0.946895611469467,3.89653456815823,0,0.883817722424512,0.886135578334485,1.35401931882508,0.25618263945135,0,0.493313713811028,0.276350017785848,0.289803085735052,2.81744470007915,1.33770414044857,1.04535523804977,0,1.14966148080576,1.71813722741315,0.759059076058509,0.318565414324097,1.30216690771284,0,0.301150238155546,0.383959833463255,0,0.236777252044017,0,3.42731463482045,2.67440195783507,2.02754165435919,0,0,0.511450247374121,0.722878304769133,0.50133791063589,1.15877215168659,0,0.973269740605272,0.378139268656271,0.221729397462564,0.175669571386252,0.196468613246569,0,0,0.324547393654683,0.522389211897802,0.26591592103773,0.238490624305342,0,0,0.198762407366705,0,0,0,0,0.550236083880135,0.208994966536811,0,0.71153252537342,0.33472061276467,0,0,0.24406205754817,0,0,0.17859945656816,0,0,0,0.949265659568129,0.183201743930407,0,3.87780264148325,0,0.993943903390637,0.25326102332916,0.264818361626438,0.286836620748814,1.06400514659507,1.68203280042692,0,0,0.311211035399766,0,0,0.151357427644931,1.15235184896,0,0,0,0.298897361103602,0.352303495931295,0,0,1.02077085627447,0.491337269247072,0.516628905878827,1.18800285728205,0.989067717114227,0,0,0,0,0.277064115484183,0.438977620880838,0.919463387397059,1.05166641234618,0.340296549480063,0.179389635688862,0.213557388818567,0.423863802319124,0.600182192168805,0.206105058476878,0.257640540045629,0.37223371266318,0.168776332241266,0.487185025805993,0.252433774244115,0.276149695926898,0,0.355009592516614,0.403008392910561,0.67824236924195,0,0.272746120590835,0.286804595389004,0,0,0,0,0,0,0,1.28648187638577,0,2.3218396401599,0.721879481669586,0.473227200159376,0.674338760312407,0.482022059766964,0.330881918197182,0.217879444092406,0.71181185733329,0.539325232640658,0,0.38474715694639,0,0,0.4115740113314,0,0,0,0,0,0,0.857839051492628,0.109750285408626,0,0,0,0,0,0,0,0.234817388471643,0.288732895522148,0,0.190254152234598,0.790204397959275,0,0.246217006087397,0.702012795417713,0.594524649154913,0,0,0,0.0895585227028483,0,0.383382679165211,0,0.176096868026452,1.4512968087854,0.864719720501769,0.25248486685276,0.063497894292169,0,0,0,0,0.300343057843917,0,0.112131084345361,0.43596006883328,0.7333828582095,0.258543431515556,0,0,0.531876233169741,1.04007436911366,0,0,0.532844358032199,0.57191197463259,0.542621605391443,0.823240336780769,0,0,0,0,0,0.299918973546171,0,0.502257091432126,0,1.19812427745791,0,0,0.434343920002738,1.2328579353023,0.358121926479791,0.224170287987055,2.75843064282698,3.45004119775228,3.7219480521127,0,0,0,0,0,0.749007023947182,2.99161459204025,0.828831026872071,0.613457458595699,2.00068208423871,0.542530047399471,0.207970861530807,0.178428988797162,0.315404830067869,1.28855556491985,0.902838299183157,0,0,0.664225598535437,0.368738337083406,0.434418072340414,0,0.343143423810856,0.620304078368662,2.5885704098234,0.853820462427555,0.303127571446259,0,0.30239029332968,0,0,0.561320188866147,0.384417447767103,0.511707249066704,0.321707842287215,1.48418066444991,0,0.532685175939381,0.0821271560138091,0,0,0.120859449591622,0.40101294060657,0.0920809889358963,0.34444334449382,0,0,0,0,0.784349769176855,0,0,0,0,0.431831832204279,1.54227252690289,0,0,0,0,0.223874754722178,0,0.784306353074702,0,0,0,0.309123034943167,0.27470839445503,0.082509499920588,0,0,1.6068392984416,0,0.462145851343933,0.307007349452259,0,0.214840489736547,0,0,0.178064071293475,0,0.192190067365106,0.382838137483752,0.30347334256665,1.85938219718914,0.31481234683064,0,0,1.06461206063404,0,0.55597265731176,0.143124886741991,0,1.2655176988749,0.38126038784765,0.511795582622668,0,0.318203247925937,0,0.179872457583315,0.274537029736055,0.353437207037059,0,0,0,0.48763373908959,0.97485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| ||
|short_description=p2@LOC401093 | |||
}} | }} |
Latest revision as of 02:09, 16 September 2015
Short description: | p2@LOC401093 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_LOC401093_5end |
Coexpression cluster: | NA |
Association with transcript: | -5bp_to_NR_027037, NR_027038, uc011boe.1, uc011bof.1_5end |
EntrezGene: | LOC401093 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.97e-12 | 98 |
blood island | 1.97e-12 | 98 |
bone marrow | 3.61e-11 | 76 |
hemolymphoid system | 1.15e-10 | 108 |
bone element | 5.81e-10 | 82 |
skeletal element | 1.19e-09 | 90 |
immune system | 4.42e-09 | 93 |
skeletal system | 5.27e-09 | 100 |
connective tissue | 2.63e-08 | 371 |
lateral plate mesoderm | 2.08e-07 | 203 |