FFCP PHASE1:Hg19::chr3:147127904..147127942,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr3:147127904..147127942,+
|short_description=p1@AB464362
|description=CAGE_peak_1_at_AB464362_5end
|association_with_transcript=4bp_to_AB464362_5end
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=4bp_to_AB464362_5end | |||
|cluster_id=chr3:147127904..147127942,+ | |||
|coexpression_cluster_id=C368 | |||
|description=CAGE_peak_1_at_AB464362_5end | |||
|id=chr3:147127904..147127942,+ | |||
|ontology_enrichment_celltype=CL:0002319!1.76e-13!25;CL:0000243!2.64e-11!15;CL:0000125!2.64e-11!15;CL:0000030!2.64e-11!15;CL:0000339!2.64e-11!15;CL:0000133!1.93e-10!59;CL:0000095!8.69e-10!17;CL:0000123!8.69e-10!17;CL:0000221!1.69e-08!71;CL:0000128!2.62e-08!7;CL:0000126!2.62e-08!7;CL:0000127!2.62e-08!7;CL:0002453!2.62e-08!7;CL:0002620!4.37e-08!23;CL:0000333!7.34e-07!41 | |||
|ontology_enrichment_celltype_v019=CL:0000708;2.31e-14;3!CL:0002559;2.54e-14;5!CL:0000064;5.67e-14;3!CL:0000067;5.67e-14;3!CL:0005012;5.67e-14;3!CL:0002304;5.67e-14;3!CL:0002603;7.20e-14;3!CL:0002564;7.10e-13;3!CL:0002575;2.18e-10;2!CL:0002549;4.66e-10;2!CL:0000047;8.99e-10;2!CL:0002561;2.41e-09;2!CL:0002319;7.73e-09;25!CL:0000346;4.21e-07;3!CL:1000428;4.21e-07;3!CL:0002590;8.32e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000708,2.31e-14,3;CL:0002559,2.54e-14,5;CL:0000064,6.33e-14,3;CL:0000067,6.33e-14,3;CL:0005012,6.33e-14,3;CL:0002304,6.33e-14,3;CL:0002603,7.21e-14,3;CL:0002564,8.74e-13,3;CL:0000221,3.38e-11,72;CL:0000133,8.76e-11,59;CL:0002575,2.19e-10,2;CL:0002549,4.66e-10,2;CL:0002561,2.41e-09,2;CL:0002319,7.23e-09,25;CL:0000346,4.21e-07,3;CL:1000428,4.21e-07,3;CL:0002590,8.21e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0006215;6.01e-13;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0002037;4.77e-25;6!UBERON:0006876;1.76e-24;11!UBERON:0004733;2.73e-21;12!UBERON:0002028;2.73e-21;12!UBERON:0004732;1.49e-19;13!UBERON:0000488;8.98e-18;4!UBERON:0002680;1.67e-16;9!UBERON:0001895;1.67e-16;9!UBERON:0005284;1.54e-14;5!UBERON:0003210;2.31e-14;3!UBERON:0002073;2.54e-14;5!UBERON:0001778;5.67e-14;3!UBERON:0001775;5.67e-14;3!UBERON:0011135;3.21e-13;5!UBERON:0002216;3.21e-13;5!UBERON:0011134;3.21e-13;5!UBERON:0002209;3.21e-13;5!UBERON:0002213;3.21e-13;5!UBERON:0007844;3.21e-13;5!UBERON:0011138;3.21e-13;5!UBERON:0001130;3.21e-13;5!UBERON:0001066;3.21e-13;5!UBERON:0001468;3.21e-13;5!UBERON:0002242;7.10e-13;3!UBERON:0004905;9.00e-13;8!UBERON:0000982;9.00e-13;8!UBERON:0004770;9.00e-13;8!UBERON:0002203;7.01e-12;6!UBERON:0001768;7.01e-12;6!UBERON:0002200;7.01e-12;6!UBERON:0005629;4.66e-10;2!UBERON:0005358;4.66e-10;2!UBERON:0001886;4.66e-10;2!UBERON:0004086;4.66e-10;2!UBERON:0005282;4.66e-10;2!UBERON:0005281;4.66e-10;2!UBERON:0007625;8.55e-10;11!UBERON:0001017;8.60e-10;75!UBERON:0010371;1.36e-09;31!UBERON:0005933;2.41e-09;2!UBERON:0005942;2.41e-09;2!UBERON:0005932;2.41e-09;2!UBERON:0001016;1.49e-08;83!UBERON:0001801;1.27e-07;14!UBERON:0000955;3.15e-07;68!UBERON:0000412;4.21e-07;3!UBERON:0001992;4.21e-07;3 | |||
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| ||
|short_description=p1@AB464362 | |||
}} | }} |
Latest revision as of 16:45, 29 July 2015
Short description: | p1@AB464362 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_AB464362_5end |
Coexpression cluster: | C368_Pericytes_Fibroblast_Nucleus_Anulus_Meningeal_Mesenchymal_Smooth |
Association with transcript: | 4bp_to_AB464362_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leptomeningeal cell | 2.31e-14 | 3 |
hair follicle cell | 2.54e-14 | 5 |
ciliated cell | 6.33e-14 | 3 |
ciliated epithelial cell | 6.33e-14 | 3 |
multi-ciliated epithelial cell | 6.33e-14 | 3 |
non-pigmented ciliary epithelial cell | 6.33e-14 | 3 |
astrocyte of the cerebellum | 7.21e-14 | 3 |
nucleus pulposus cell of intervertebral disc | 8.74e-13 | 3 |
ectodermal cell | 3.38e-11 | 72 |
neurectodermal cell | 8.76e-11 | 59 |
central nervous system pericyte | 2.19e-10 | 2 |
fibroblast of choroid plexus | 4.66e-10 | 2 |
outer root sheath cell | 2.41e-09 | 2 |
neural cell | 7.23e-09 | 25 |
hair follicle dermal papilla cell | 4.21e-07 | 3 |
stem cell of epidermis | 4.21e-07 | 3 |
smooth muscle cell of the brain vasculature | 8.21e-07 | 3 |