FFCP PHASE1:Hg19::chr3:129546763..129546780,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr3:129546763..129546780,-
|short_description=p17@TMCC1
|description=CAGE_peak_17_at_TMCC1_5end
|association_with_transcript=400bp_to_CR749206_5end
|EntrezGen...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23023 | |EntrezGene=23023 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=29116 | |HGNC=29116 | ||
|TSSclassifier=strong | |||
|UniProt=O94876 | |UniProt=O94876 | ||
|association_with_transcript=400bp_to_CR749206_5end | |||
|cluster_id=chr3:129546763..129546780,- | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_17_at_TMCC1_5end | |||
|id=chr3:129546763..129546780,- | |||
|ontology_enrichment_celltype=CL:0000766!7.76e-33!76;CL:0000738!5.01e-30!140;CL:0002087!2.58e-24!119;CL:0002057!2.25e-23!42;CL:0002194!6.30e-23!63;CL:0000576!6.30e-23!63;CL:0000040!6.30e-23!63;CL:0000559!6.30e-23!63;CL:0000839!7.07e-23!70;CL:0000557!2.31e-22!71;CL:0000037!5.61e-22!172;CL:0000566!5.61e-22!172;CL:0002009!7.93e-22!65;CL:0002031!2.91e-21!124;CL:0000988!3.94e-21!182;CL:0000860!4.16e-21!45;CL:0002032!5.17e-21!165;CL:0000837!5.17e-21!165;CL:0000763!7.65e-19!112;CL:0000049!7.65e-19!112;CL:0002393!2.26e-13!9;CL:0002397!2.26e-13!9;CL:0000094!1.56e-12!8;CL:0000081!1.67e-08!11 | |||
|ontology_enrichment_celltype_v019=CL:0000094;2.54e-49;8!CL:0000081;1.06e-35;11!CL:0000235;7.73e-34;6!CL:0000775;9.58e-26;3!CL:0002393;2.32e-21;6!CL:0002397;2.32e-21;6!CL:0000766;1.19e-19;69!CL:0000771;9.06e-18;2!CL:0000767;2.31e-11;3!CL:0000473;1.52e-10;39!CL:0000234;1.52e-10;39!CL:0000763;6.46e-09;100!CL:0000576;1.51e-08;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000094,3.63e-49,8;CL:0000766,6.73e-45,72;CL:0000081,1.37e-35,11;CL:0000235,9.81e-34,6;CL:0000763,6.16e-29,108;CL:0000049,6.16e-29,108;CL:0000775,9.59e-26,3;CL:0000473,1.01e-25,48;CL:0000234,1.01e-25,48;CL:0000738,1.04e-24,136;CL:0002194,1.80e-23,59;CL:0000576,1.80e-23,59;CL:0000040,1.80e-23,59;CL:0000559,1.80e-23,59;CL:0002009,1.23e-22,61;CL:0002393,5.59e-22,9;CL:0002397,5.59e-22,9;CL:0000839,9.22e-21,66;CL:0000557,2.02e-20,67;CL:0000037,2.41e-19,168;CL:0002032,2.58e-18,161;CL:0000837,2.58e-18,161;CL:0000988,3.51e-18,177;CL:0000771,9.07e-18,2;CL:0002087,1.04e-12,115;CL:0000767,3.01e-11,3;CL:0000860,5.66e-11,42;CL:0002057,5.66e-11,42;CL:0002031,2.20e-10,120;CL:0000134,3.20e-07,354;CL:0002320,5.26e-07,361 | |||
|ontology_enrichment_development_v019=CL:0000049;1.30e-08;108!CL:0002057;2.97e-08;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.45e-29!102;UBERON:0003061!1.45e-29!102;UBERON:0002193!3.32e-26!112;UBERON:0002371!2.09e-19!80;UBERON:0001474!4.08e-17!86;UBERON:0002405!1.98e-14!115;UBERON:0004765!1.15e-12!101;UBERON:0001434!1.15e-12!101;UBERON:0000178!3.48e-11!15;UBERON:0000179!3.48e-11!15;UBERON:0000463!3.48e-11!15;UBERON:0003081!2.38e-08!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,9.60e-18,76;UBERON:0002390,1.12e-17,98;UBERON:0003061,1.12e-17,98;UBERON:0001474,2.78e-16,82;UBERON:0002193,8.63e-16,108;UBERON:0004765,1.24e-14,90;UBERON:0002405,4.38e-14,93;UBERON:0001434,6.18e-13,100;UBERON:0003081,4.32e-07,203;UBERON:0002204,8.74e-07,167 | |||
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| ||
|short_description=p17@TMCC1 | |||
}} | }} |
Latest revision as of 18:23, 24 September 2015
Short description: | p17@TMCC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_17_at_TMCC1_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 400bp_to_CR749206_5end |
EntrezGene: | TMCC1 |
HGNC: | 29116 |
UniProt: | O94876 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 9.60e-18 | 76 |
hematopoietic system | 1.12e-17 | 98 |
blood island | 1.12e-17 | 98 |
bone element | 2.78e-16 | 82 |
hemolymphoid system | 8.63e-16 | 108 |
skeletal element | 1.24e-14 | 90 |
immune system | 4.38e-14 | 93 |
skeletal system | 6.18e-13 | 100 |
lateral plate mesoderm | 4.32e-07 | 203 |
musculoskeletal system | 8.74e-07 | 167 |