FFCP PHASE1:Hg19::chr3:128205779..128205797,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr3:128205779..128205797,-
|short_description=p5@GATA2
|description=CAGE_peak_5_at_GATA2_5end
|association_with_transcript=76bp_to_BT006671_5end
|EntrezGene=2...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2624 | |EntrezGene=2624 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=4171 | |HGNC=4171 | ||
|TSSclassifier=strong | |||
|UniProt=P23769 | |UniProt=P23769 | ||
|association_with_transcript=76bp_to_BT006671_5end | |||
|cluster_id=chr3:128205779..128205797,- | |||
|coexpression_cluster_id=C12 | |||
|description=CAGE_peak_5_at_GATA2_5end | |||
|id=chr3:128205779..128205797,- | |||
|ontology_enrichment_celltype=CL:0002274!3.92e-12!5;CL:0000457!3.92e-12!5;CL:0002191!3.92e-12!5;CL:0000097!3.92e-12!5;CL:0000831!3.92e-12!5;CL:0002028!3.92e-12!5;CL:0000163!1.06e-08!9 | |||
|ontology_enrichment_celltype_v019=CL:0000097;6.98e-99;5!CL:0000163;3.64e-55;9!CL:0000151;6.80e-13;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,6.32e-99,5;CL:0002028,6.32e-99,5;CL:0000163,3.44e-55,9;CL:0000151,5.25e-14,36;CL:0000763,1.09e-08,108;CL:0000049,1.09e-08,108;CL:0000839,1.44e-07,66;CL:0000557,1.85e-07,67;CL:0000766,5.99e-07,72 | |||
|ontology_enrichment_development_v019=UBERON:0005754;2.82e-21;1!UBERON:0007297;2.47e-11;2 | |||
|ontology_enrichment_disease=DOID:8692!7.89e-10!31;DOID:1240!4.19e-07!39 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0006947!3.67e-07!3;UBERON:0004054!3.67e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0000998;2.82e-21;1!UBERON:0006868;2.82e-21;1!UBERON:0006947;5.54e-08;3!UBERON:0004054;5.54e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000998,2.82e-21,1;UBERON:0006868,2.82e-21,1;UBERON:0006947,5.54e-08,3;UBERON:0004054,5.54e-08,3 | |||
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| ||
|short_description=p5@GATA2 | |||
}} | }} |
Latest revision as of 06:58, 20 September 2015
Short description: | p5@GATA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_GATA2_5end |
Coexpression cluster: | C12_Mast_Basophils_immature_chorionic_mature_CD14_Eosinophils |
Association with transcript: | 76bp_to_BT006671_5end |
EntrezGene: | GATA2 |
HGNC: | 4171 |
UniProt: | P23769 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 6.32e-99 | 5 |
basophil mast progenitor cell | 6.32e-99 | 5 |
endocrine cell | 3.44e-55 | 9 |
secretory cell | 5.25e-14 | 36 |
myeloid cell | 1.09e-08 | 108 |
common myeloid progenitor | 1.09e-08 | 108 |
myeloid lineage restricted progenitor cell | 1.44e-07 | 66 |
granulocyte monocyte progenitor cell | 1.85e-07 | 67 |
myeloid leukocyte | 5.99e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
seminal vesicle | 2.82e-21 | 1 |
seminal fluid secreting gland | 2.82e-21 | 1 |
male genital duct | 5.54e-08 | 3 |
internal male genitalia | 5.54e-08 | 3 |