FFCP PHASE1:Hg19::chr3:126423045..126423123,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr3:126423045..126423123,+
|short_description=p1@CHCHD6
|description=CAGE_peak_1_at_CHCHD6_5end
|association_with_transcript=0bp_to_ENST00000290913,ENST0000050...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=84303 | |EntrezGene=84303 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28184 | |HGNC=28184 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BRQ6,D6RIB4,D6R9U0 | |UniProt=Q9BRQ6,D6RIB4,D6R9U0 | ||
|association_with_transcript=0bp_to_ENST00000290913,ENST00000503119,ENST00000508789,ENST00000514908,NM_032343,uc003ejf.1,uc010hsj.1_5end | |||
|cluster_id=chr3:126423045..126423123,+ | |||
|description=CAGE_peak_1_at_CHCHD6_5end | |||
|id=chr3:126423045..126423123,+ | |||
|ontology_enrichment_celltype=CL:0002321!4.69e-14!248;CL:0000220!2.26e-13!246;CL:0000393!5.61e-09!60;CL:0000211!5.61e-09!60;CL:0000221!2.56e-08!71;CL:0000183!4.66e-08!59;CL:0000066!7.60e-08!254;CL:0000055!1.12e-07!180;CL:0000133!6.26e-07!59;CL:0000187!7.16e-07!54;CL:0000680!9.12e-07!57;CL:0000056!9.12e-07!57;CL:0000355!9.12e-07!57 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,1.06e-13,250;CL:0000393,1.67e-08,61;CL:0000211,1.67e-08,61;CL:0000221,3.58e-08,72;CL:0000066,4.71e-08,253;CL:0000133,6.26e-07,59 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.14e-20!94;UBERON:0001016!1.14e-20!94;UBERON:0000481!1.36e-20!347;UBERON:0000475!1.47e-20!365;UBERON:0005743!4.71e-20!86;UBERON:0000483!8.38e-20!309;UBERON:0000119!1.21e-19!312;UBERON:0001017!1.26e-19!82;UBERON:0000924!1.54e-19!173;UBERON:0006601!1.54e-19!173;UBERON:0002346!2.83e-19!90;UBERON:0004121!2.93e-18!169;UBERON:0003075!7.01e-18!86;UBERON:0007284!7.01e-18!86;UBERON:0000955!1.12e-17!69;UBERON:0006238!1.12e-17!69;UBERON:0000033!2.62e-17!123;UBERON:0003056!6.15e-16!61;UBERON:0001049!1.01e-15!57;UBERON:0005068!1.01e-15!57;UBERON:0006241!1.01e-15!57;UBERON:0007135!1.01e-15!57;UBERON:0002616!3.06e-15!59;UBERON:0000025!3.71e-15!194;UBERON:0000153!7.76e-15!129;UBERON:0007811!7.76e-15!129;UBERON:0001869!6.25e-14!32;UBERON:0002780!8.10e-14!41;UBERON:0001890!8.10e-14!41;UBERON:0006240!8.10e-14!41;UBERON:0001893!1.04e-13!34;UBERON:0002020!1.05e-13!34;UBERON:0003528!1.05e-13!34;UBERON:0002791!3.40e-13!33;UBERON:0003080!5.34e-13!42;UBERON:0004111!1.11e-11!241;UBERON:0002619!1.99e-11!22;UBERON:0000956!2.58e-11!25;UBERON:0000203!2.58e-11!25;UBERON:0001950!2.56e-10!20;UBERON:0000064!1.76e-09!219;UBERON:0000477!1.77e-09!286;UBERON:0003104!7.23e-08!238;UBERON:0009142!7.23e-08!238 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;1.03e-12;32!UBERON:0003528;3.29e-12;34!UBERON:0002020;3.29e-12;34!UBERON:0001893;4.61e-12;34!UBERON:0002791;5.00e-12;32!UBERON:0002619;1.58e-11;22!UBERON:0000956;1.95e-11;25!UBERON:0000203;1.95e-11;25!UBERON:0001950;2.06e-10;20!UBERON:0002780;2.88e-10;41!UBERON:0001890;2.88e-10;41!UBERON:0000073;9.12e-10;53!UBERON:0002616;9.12e-10;53!UBERON:0000955;4.91e-09;68!UBERON:0001017;1.26e-07;75!UBERON:0001016;2.60e-07;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,6.85e-21,89;UBERON:0001017,2.49e-20,81;UBERON:0004121,4.53e-20,171;UBERON:0000924,4.53e-20,171;UBERON:0006601,4.53e-20,171;UBERON:0002346,6.91e-20,86;UBERON:0000483,9.18e-20,306;UBERON:0000119,1.33e-19,309;UBERON:0003075,1.79e-18,82;UBERON:0007284,1.79e-18,82;UBERON:0000955,2.08e-18,68;UBERON:0006238,2.08e-18,68;UBERON:0010371,2.23e-17,104;UBERON:0000073,1.66e-16,53;UBERON:0002616,1.66e-16,53;UBERON:0001049,1.73e-16,56;UBERON:0005068,1.73e-16,56;UBERON:0006241,1.73e-16,56;UBERON:0007135,1.73e-16,56;UBERON:0003056,5.35e-16,61;UBERON:0000025,7.02e-16,192;UBERON:0011216,1.44e-14,223;UBERON:0001869,6.24e-14,32;UBERON:0010314,7.75e-14,132;UBERON:0002780,8.09e-14,41;UBERON:0001890,8.09e-14,41;UBERON:0003080,8.09e-14,41;UBERON:0006240,8.09e-14,41;UBERON:0001893,1.04e-13,34;UBERON:0003528,1.05e-13,34;UBERON:0002020,1.05e-13,34;UBERON:0002791,4.24e-13,32;UBERON:0004111,1.67e-12,240;UBERON:0002619,1.99e-11,22;UBERON:0000956,2.58e-11,25;UBERON:0000203,2.58e-11,25;UBERON:0001950,2.56e-10,20;UBERON:0003104,2.22e-07,160;UBERON:0009142,2.22e-07,160;UBERON:0000922,7.09e-07,592 | |||
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| ||
|short_description=p1@CHCHD6 | |||
}} | }} |
Latest revision as of 04:44, 20 September 2015
Short description: | p1@CHCHD6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CHCHD6_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000290913, ENST00000503119, ENST00000508789, ENST00000514908, NM_032343, uc003ejf.1, uc010hsj.1_5end |
EntrezGene: | CHCHD6 |
HGNC: | 28184 |
UniProt: | Q9BRQ6D6RIB4D6R9U0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 1.06e-13 | 250 |
electrically responsive cell | 1.67e-08 | 61 |
electrically active cell | 1.67e-08 | 61 |
ectodermal cell | 3.58e-08 | 72 |
epithelial cell | 4.71e-08 | 253 |
neurectodermal cell | 6.26e-07 | 59 |