FFCP PHASE1:Hg19::chr3:121554046..121554091,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr3:121554046..121554091,+
|short_description=p1@EAF2
|description=CAGE_peak_1_at_EAF2_5end
|association_with_transcript=0bp_to_ENST00000273668,ENST00000451944...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55840 | |EntrezGene=55840 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23115 | |HGNC=23115 | ||
|TSSclassifier=strong | |||
|UniProt=Q96CJ1,B4DWJ3 | |UniProt=Q96CJ1,B4DWJ3 | ||
|association_with_transcript=0bp_to_ENST00000273668,ENST00000451944,ENST00000465664_5end | |||
|cluster_id=chr3:121554046..121554091,+ | |||
|coexpression_cluster_id=C47 | |||
|description=CAGE_peak_1_at_EAF2_5end | |||
|id=chr3:121554046..121554091,+ | |||
|ontology_enrichment_celltype=CL:0000037!3.44e-66!172;CL:0000566!3.44e-66!172;CL:0002032!4.84e-62!165;CL:0000837!4.84e-62!165;CL:0000988!9.28e-61!182;CL:0000738!5.06e-50!140;CL:0002031!1.09e-42!124;CL:0002087!1.93e-41!119;CL:0000763!4.03e-40!112;CL:0000049!4.03e-40!112;CL:0000766!2.75e-25!76;CL:0000557!1.93e-23!71;CL:0000839!4.42e-23!70;CL:0002009!1.87e-21!65;CL:0002194!6.55e-21!63;CL:0000576!6.55e-21!63;CL:0000040!6.55e-21!63;CL:0000559!6.55e-21!63;CL:0000542!1.53e-18!53;CL:0000051!1.53e-18!53;CL:0002057!4.08e-18!42;CL:0000838!5.26e-18!52;CL:0000860!3.24e-17!45;CL:0000945!4.50e-15!24;CL:0000826!4.50e-15!24;CL:0000236!5.29e-10!14 | |||
|ontology_enrichment_celltype_v019=CL:0000945;2.29e-15;24!CL:0000576;4.06e-14;48!CL:0000763;7.91e-13;100!CL:0000473;9.33e-13;39!CL:0000234;9.33e-13;39!CL:0000860;1.02e-12;33!CL:0002057;1.02e-12;33!CL:0002087;1.80e-12;104!CL:0000766;2.30e-12;69!CL:0000738;9.27e-12;136!CL:0000542;1.26e-11;53!CL:0000988;2.32e-11;177!CL:0000236;9.70e-10;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,4.26e-69,168;CL:0002032,7.48e-65,161;CL:0000837,7.48e-65,161;CL:0000988,2.42e-64,177;CL:0000738,1.39e-52,136;CL:0002031,4.38e-45,120;CL:0002087,7.72e-44,115;CL:0000763,1.51e-42,108;CL:0000049,1.51e-42,108;CL:0000766,2.25e-27,72;CL:0000557,1.74e-25,67;CL:0000839,4.06e-25,66;CL:0002009,1.82e-23,61;CL:0002194,6.35e-23,59;CL:0000576,6.35e-23,59;CL:0000040,6.35e-23,59;CL:0000559,6.35e-23,59;CL:0000473,8.66e-21,48;CL:0000234,8.66e-21,48;CL:0000542,7.41e-19,53;CL:0000051,7.41e-19,53;CL:0000860,2.02e-18,42;CL:0002057,2.02e-18,42;CL:0000838,2.61e-18,52;CL:0000945,2.53e-15,24;CL:0000826,2.53e-15,24;CL:0000236,3.70e-10,14 | |||
|ontology_enrichment_development_v019=CL:0002057;2.33e-13;42!CL:0000049;4.01e-12;108!CL:0000051;1.26e-11;53 | |||
|ontology_enrichment_disease=DOID:2531!3.33e-19!51;DOID:0060083!3.33e-19!51;DOID:1240!1.33e-16!39;DOID:8692!1.24e-13!31 | |||
|ontology_enrichment_disease_v019=DOID:1240;2.28e-13;39!DOID:8692;2.69e-13;31!DOID:2531;5.55e-12;51!DOID:0060083;5.55e-12;51 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,1.58e-19,51;DOID:0060083,1.58e-19,51;DOID:1240,6.99e-17,39;DOID:8692,7.42e-14,31 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.03e-07;15!UBERON:0000179;1.03e-07;15!UBERON:0000463;1.03e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.82e-31,98;UBERON:0003061,3.82e-31,98;UBERON:0002193,9.92e-26,108;UBERON:0002371,9.62e-22,76;UBERON:0001474,2.02e-20,82;UBERON:0002405,1.94e-19,93;UBERON:0007023,3.98e-19,114;UBERON:0004765,6.83e-16,90;UBERON:0001434,1.58e-12,100;UBERON:0000178,1.04e-07,15;UBERON:0000179,1.04e-07,15;UBERON:0000463,1.04e-07,15;UBERON:0001049,1.50e-07,56;UBERON:0005068,1.50e-07,56;UBERON:0006241,1.50e-07,56;UBERON:0007135,1.50e-07,56;UBERON:0000073,7.94e-07,53;UBERON:0002616,7.94e-07,53;UBERON:0002780,8.52e-07,41;UBERON:0001890,8.52e-07,41;UBERON:0003080,8.52e-07,41;UBERON:0006240,8.52e-07,41 | |||
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| ||
|short_description=p1@EAF2 | |||
}} | }} |
Latest revision as of 23:01, 19 September 2015
Short description: | p1@EAF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_EAF2_5end |
Coexpression cluster: | C47_CD19_Burkitt_acute_xeroderma_tonsil_lymphoma_appendix |
Association with transcript: | 0bp_to_ENST00000273668, ENST00000451944, ENST00000465664_5end |
EntrezGene: | EAF2 |
HGNC: | 23115 |
UniProt: | Q96CJ1B4DWJ3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 4.26e-69 | 168 |
hematopoietic oligopotent progenitor cell | 7.48e-65 | 161 |
hematopoietic multipotent progenitor cell | 7.48e-65 | 161 |
hematopoietic cell | 2.42e-64 | 177 |
leukocyte | 1.39e-52 | 136 |
hematopoietic lineage restricted progenitor cell | 4.38e-45 | 120 |
nongranular leukocyte | 7.72e-44 | 115 |
myeloid cell | 1.51e-42 | 108 |
common myeloid progenitor | 1.51e-42 | 108 |
myeloid leukocyte | 2.25e-27 | 72 |
granulocyte monocyte progenitor cell | 1.74e-25 | 67 |
myeloid lineage restricted progenitor cell | 4.06e-25 | 66 |
macrophage dendritic cell progenitor | 1.82e-23 | 61 |
monopoietic cell | 6.35e-23 | 59 |
monocyte | 6.35e-23 | 59 |
monoblast | 6.35e-23 | 59 |
promonocyte | 6.35e-23 | 59 |
defensive cell | 8.66e-21 | 48 |
phagocyte | 8.66e-21 | 48 |
lymphocyte | 7.41e-19 | 53 |
common lymphoid progenitor | 7.41e-19 | 53 |
classical monocyte | 2.02e-18 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.02e-18 | 42 |
lymphoid lineage restricted progenitor cell | 2.61e-18 | 52 |
lymphocyte of B lineage | 2.53e-15 | 24 |
pro-B cell | 2.53e-15 | 24 |
B cell | 3.70e-10 | 14 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.82e-31 | 98 |
blood island | 3.82e-31 | 98 |
hemolymphoid system | 9.92e-26 | 108 |
bone marrow | 9.62e-22 | 76 |
bone element | 2.02e-20 | 82 |
immune system | 1.94e-19 | 93 |
adult organism | 3.98e-19 | 114 |
skeletal element | 6.83e-16 | 90 |
skeletal system | 1.58e-12 | 100 |
blood | 1.04e-07 | 15 |
haemolymphatic fluid | 1.04e-07 | 15 |
organism substance | 1.04e-07 | 15 |
neural tube | 1.50e-07 | 56 |
neural rod | 1.50e-07 | 56 |
future spinal cord | 1.50e-07 | 56 |
neural keel | 1.50e-07 | 56 |
regional part of nervous system | 7.94e-07 | 53 |
regional part of brain | 7.94e-07 | 53 |
regional part of forebrain | 8.52e-07 | 41 |
forebrain | 8.52e-07 | 41 |
anterior neural tube | 8.52e-07 | 41 |
future forebrain | 8.52e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 1.58e-19 | 51 |
immune system cancer | 1.58e-19 | 51 |
leukemia | 6.99e-17 | 39 |
myeloid leukemia | 7.42e-14 | 31 |