FFCP PHASE1:Hg19::chr3:120188958..120188971,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr3:120188958..120188971,+
|short_description=p@chr3:120188958..120188971,+
|description=CAGE_peak_at_chr3:120188958..120188971,+
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr3:120188958..120188971,+ | |||
|description=CAGE_peak_at_chr3:120188958..120188971,+ | |||
|id=chr3:120188958..120188971,+ | |||
|ontology_enrichment_celltype=CL:0000077!6.04e-11!19;CL:0000076!2.28e-09!62;CL:0000066!5.76e-07!254 | |||
|ontology_enrichment_celltype_v019=CL:1001319;1.07e-11;1!CL:1000600;1.07e-11;1 | |||
|ontology_enrichment_celltype_v019_2=CL:1001319,6.26e-12,1;CL:1000600,6.26e-12,1;CL:0000076,1.08e-09,63 | |||
|ontology_enrichment_development_v019=UBERON:0007123;1.48e-09;5 | |||
|ontology_enrichment_disease=DOID:162!2.12e-13!235;DOID:1749!5.02e-13!14;DOID:14566!7.58e-13!239;DOID:0050687!1.91e-11!143;DOID:305!7.21e-11!106;DOID:7!5.01e-07!39 | |||
|ontology_enrichment_disease_v019=DOID:1749;1.00e-18;14!DOID:3112;4.06e-12;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,1.16e-18,14;DOID:3112,3.65e-12,1;DOID:162,4.63e-09,235;DOID:14566,8.02e-09,239;DOID:305,1.61e-08,106;DOID:0050687,2.92e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0002394!9.82e-10!4;UBERON:0003928!9.82e-10!4;UBERON:0002294!3.09e-08!7;UBERON:0001173!3.09e-08!7;UBERON:0004912!3.09e-08!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0007195;4.06e-12;1!UBERON:0004645;1.07e-11;1!UBERON:0004913;1.07e-11;1!UBERON:0003703;1.07e-11;1!UBERON:0001256;1.07e-11;1!UBERON:0001259;1.07e-11;1!UBERON:0001174;1.07e-11;1!UBERON:0004914;1.07e-11;1!UBERON:0002046;1.48e-09;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007195,5.62e-12,1;UBERON:0004645,6.26e-12,1;UBERON:0001256,6.26e-12,1;UBERON:0001259,6.26e-12,1;UBERON:0004913,6.97e-12,1;UBERON:0003703,6.97e-12,1;UBERON:0001174,6.97e-12,1;UBERON:0004914,6.97e-12,1;UBERON:0002046,1.25e-09,5;UBERON:0004117,1.25e-09,5;UBERON:0007689,1.25e-09,5;UBERON:0007123,1.25e-09,5;UBERON:0003091,1.25e-09,5 | |||
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|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602694528023977,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0.860509862246441,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438977620880838,0.30648779579902,0,0,0.179389635688862,0,0,0,0.206105058476878,0.257640540045629,0,0.337552664482532,0,0.252433774244115,0,0,0,0.10075209822764,0.169560592310488,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0,0.581267877027924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164254312027618,0,0.116210378459959,0.120859449591622,0,0,0.114814448164607,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0,0.143411352204052,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.69544237579135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47748896947538,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449341755736634,0.179021174675609,0,0,0,2.22273980289274,0,0,0,0,0.0874599999961957,0,0.455173793141999,0,1.41832609060762,0,0,0,0,0,0,0,0,0,0,0,0,0.227884111694002,0,0.0897576444097721,0.217294743844016,0,0,0,0,0,0,0,0,0,1.13852239634511,0,0,0.326465616318295,0.565412285735763,0,0,0,0,0.593042257361244,0,0,0,0,0,0,0,0,0,0,0,0,0.901940516486955,0,0,0,0,0,0,0,0,0,1.30588809870604,0,0,0.0967563312890851,0,0,0,0,0,0,0.596143835108969,0,0,0.320635281006135,0,0.39961921916426,0,0,0,0,0,0.235694034616795,2.44627570932505,2.40586546518366,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.482259445395058,0,0,0,0,0,0,0,0,0,0,0.191915197319445,0,0,0,0,0,0,1.19730191562487,1.55975789423744,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.46838880439127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470531639396343,0,0,0,0,0,0.189403005275089,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,1.28664954824955,0.521988583930423,0.453411851024545,0.926089897295336,0,0.179088841081487,0,0.219284049578707,0.353378291891762,0.964570191354574,1.01365464391844,0,2.41801239211839,0,0,0,0,0,0.655219697692825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06172751012966,0.366857197043358,0.577628330751691,0,0,0,0,0.20170506870352,0,0,2.62035068016155,1.77427303460454,0,0,0,0,0,0,0,0,0.511049710558381,0,0,0,0,0.0887023701626388,0,0,0,0,0,0.111231401892069,0,0,0.280272163313789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.098150233615243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0,1.05868461514708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.80329656451534,0,0,0,0,0,0,0,1.87227517805241,0.106727345877715,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr3:120188958..120188971,+ | |||
}} | }} |
Latest revision as of 14:54, 29 July 2015
Short description: | p@chr3:120188958..120188971, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:120188958..120188971, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bladder cell | 6.26e-12 | 1 |
lower urinary tract cell | 6.26e-12 | 1 |
squamous epithelial cell | 1.08e-09 | 63 |
Ontology term | p-value | n |
---|---|---|
stroma of bone marrow | 5.62e-12 | 1 |
urinary bladder urothelium | 6.26e-12 | 1 |
wall of urinary bladder | 6.26e-12 | 1 |
mucosa of urinary bladder | 6.26e-12 | 1 |
hepatopancreatic ampulla | 6.97e-12 | 1 |
extrahepatic bile duct | 6.97e-12 | 1 |
common bile duct | 6.97e-12 | 1 |
duodenal papilla | 6.97e-12 | 1 |
thyroid gland | 1.25e-09 | 5 |
pharyngeal pouch | 1.25e-09 | 5 |
thyroid diverticulum | 1.25e-09 | 5 |
pharyngeal pouch 2 | 1.25e-09 | 5 |
thyroid primordium | 1.25e-09 | 5 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 1.16e-18 | 14 |
papillary adenocarcinoma | 3.65e-12 | 1 |
cancer | 4.63e-09 | 235 |
disease of cellular proliferation | 8.02e-09 | 239 |
carcinoma | 1.61e-08 | 106 |
cell type cancer | 2.92e-07 | 143 |