FFCP PHASE1:Hg19::chr3:11079240..11079242,+: Difference between revisions
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|id=chr3:11079240..11079242,+
|short_description=p6@SLC6A1
|description=CAGE_peak_6_at_SLC6A1_5end
|association_with_transcript=299bp_to_AK090958_5end
|EntrezGene=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6529 | |EntrezGene=6529 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=11042 | |HGNC=11042 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=299bp_to_AK090958_5end | |||
|cluster_id=chr3:11079240..11079242,+ | |||
|coexpression_cluster_id=C4263 | |||
|description=CAGE_peak_6_at_SLC6A1_5end | |||
|id=chr3:11079240..11079242,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0004161;2.47e-07;11 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p6@SLC6A1 | |||
}} | }} |
Latest revision as of 12:23, 19 September 2015
Short description: | p6@SLC6A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_SLC6A1_5end |
Coexpression cluster: | C4263_occipital_medial_Renal_liver_brain_olfactory_frontal |
Association with transcript: | 299bp_to_AK090958_5end |
EntrezGene: | SLC6A1 |
HGNC: | 11042 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
middle temporal gyrus | 5.04e-34 | 2 |
occipital lobe | 1.40e-14 | 5 |
neocortex | 1.02e-13 | 20 |
regional part of cerebral cortex | 1.25e-12 | 22 |
gyrus | 2.45e-12 | 6 |
cerebral cortex | 2.63e-11 | 25 |
pallium | 2.63e-11 | 25 |
temporal lobe | 8.99e-11 | 6 |
regional part of telencephalon | 3.79e-09 | 32 |
cerebral hemisphere | 3.79e-09 | 32 |
brain grey matter | 1.09e-08 | 34 |
gray matter | 1.09e-08 | 34 |
telencephalon | 1.09e-08 | 34 |
regional part of forebrain | 2.04e-07 | 41 |
forebrain | 2.04e-07 | 41 |
anterior neural tube | 2.04e-07 | 41 |
future forebrain | 2.04e-07 | 41 |