FFCP PHASE1:Hg19::chr2:98279571..98279582,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr2:98279571..98279582,+
|short_description=p@chr2:98279571..98279582,+
|description=CAGE_peak_at_chr2:98279571..98279582,+
|association_with_transcript=NA
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr2:98279571..98279582,+ | |||
|coexpression_cluster_id=C1351 | |||
|description=CAGE_peak_at_chr2:98279571..98279582,+ | |||
|id=chr2:98279571..98279582,+ | |||
|ontology_enrichment_celltype=CL:0002031!3.44e-12!124;CL:0000860!3.67e-12!45;CL:0000557!7.28e-12!71;CL:0000738!9.08e-12!140;CL:0002087!7.88e-11!119;CL:0002057!7.94e-11!42;CL:0002009!1.02e-10!65;CL:0000839!4.19e-10!70;CL:0000766!5.10e-10!76;CL:0002194!2.83e-09!63;CL:0000576!2.83e-09!63;CL:0000040!2.83e-09!63;CL:0000559!2.83e-09!63;CL:0000988!4.11e-08!182;CL:0000037!8.46e-08!172;CL:0000566!8.46e-08!172;CL:0002032!4.22e-07!165;CL:0000837!4.22e-07!165 | |||
|ontology_enrichment_celltype_v019=CL:0000860;6.97e-19;33!CL:0002057;6.97e-19;33!CL:0000623;8.19e-19;3!CL:0000473;5.86e-17;39!CL:0000234;5.86e-17;39!CL:0001014;2.29e-14;2!CL:0001016;2.29e-14;2!CL:0000766;3.34e-13;69!CL:0000576;4.74e-13;48!CL:0002393;1.33e-10;6!CL:0002397;1.33e-10;6!CL:0002087;5.48e-10;104!CL:0000226;3.25e-09;3!CL:0000842;3.25e-09;3!CL:0000738;1.62e-08;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000557,5.42e-30,67;CL:0000860,3.40e-27,42;CL:0002057,3.40e-27,42;CL:0000473,5.76e-27,48;CL:0000234,5.76e-27,48;CL:0002009,1.78e-26,61;CL:0000738,3.21e-26,136;CL:0002031,2.18e-25,120;CL:0000839,6.61e-24,66;CL:0002087,6.74e-22,115;CL:0000766,1.18e-21,72;CL:0002194,5.85e-21,59;CL:0000576,5.85e-21,59;CL:0000040,5.85e-21,59;CL:0000559,5.85e-21,59;CL:0000037,2.62e-20,168;CL:0000623,4.83e-19,3;CL:0000825,4.83e-19,3;CL:0000988,5.00e-19,177;CL:0002032,9.28e-18,161;CL:0000837,9.28e-18,161;CL:0000763,3.11e-17,108;CL:0000049,3.11e-17,108;CL:0001014,2.22e-14,2;CL:0001016,2.22e-14,2;CL:0000226,2.99e-09,3;CL:0000842,2.99e-09,3;CL:0000134,8.18e-08,354;CL:0002320,1.47e-07,361;CL:0002393,3.33e-07,9;CL:0002397,3.33e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;6.78e-18;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!3.90e-10!80;UBERON:0001474!4.33e-10!86;UBERON:0002390!3.82e-09!102;UBERON:0003061!3.82e-09!102;UBERON:0004765!3.23e-08!101;UBERON:0001434!3.23e-08!101;UBERON:0002193!7.86e-08!112 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.98e-26,76;UBERON:0002390,4.24e-24,98;UBERON:0003061,4.24e-24,98;UBERON:0001474,7.30e-24,82;UBERON:0002193,1.71e-21,108;UBERON:0004765,2.03e-21,90;UBERON:0002405,1.30e-20,93;UBERON:0001434,6.55e-19,100;UBERON:0003081,1.30e-10,203;UBERON:0002204,8.26e-10,167;UBERON:0002384,3.25e-07,371 | |||
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| ||
|short_description=p@chr2:98279571..98279582,+ | |||
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Latest revision as of 13:27, 29 July 2015
Short description: | p@chr2:98279571..98279582, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:98279571..98279582, + |
Coexpression cluster: | C1351_immature_CD14_CD34_Peripheral_Mast_Basophils_Natural |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.98e-26 | 76 |
hematopoietic system | 4.24e-24 | 98 |
blood island | 4.24e-24 | 98 |
bone element | 7.30e-24 | 82 |
hemolymphoid system | 1.71e-21 | 108 |
skeletal element | 2.03e-21 | 90 |
immune system | 1.30e-20 | 93 |
skeletal system | 6.55e-19 | 100 |
lateral plate mesoderm | 1.30e-10 | 203 |
musculoskeletal system | 8.26e-10 | 167 |
connective tissue | 3.25e-07 | 371 |