FFCP PHASE1:Hg19::chr2:9695971..9695995,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:9695971..9695995,-
|short_description=p2@ADAM17
|description=CAGE_peak_2_at_ADAM17_5end
|association_with_transcript=-50bp_to_ENST00000497134,ENST000005385...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6868 | |EntrezGene=6868 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=195 | |HGNC=195 | ||
|TSSclassifier=strong | |||
|UniProt=E7EUI5,A6H8L4 | |UniProt=E7EUI5,A6H8L4 | ||
|association_with_transcript=-50bp_to_ENST00000497134,ENST00000538558_5end | |||
|cluster_id=chr2:9695971..9695995,- | |||
|description=CAGE_peak_2_at_ADAM17_5end | |||
|id=chr2:9695971..9695995,- | |||
|ontology_enrichment_celltype=CL:0002057!2.84e-18!42;CL:0000738!3.73e-17!140;CL:0002087!1.07e-15!119;CL:0000766!1.43e-15!76;CL:0002009!1.66e-15!65;CL:0000860!2.94e-15!45;CL:0000037!2.97e-15!172;CL:0000566!2.97e-15!172;CL:0002032!1.23e-14!165;CL:0000837!1.23e-14!165;CL:0002194!1.46e-14!63;CL:0000576!1.46e-14!63;CL:0000040!1.46e-14!63;CL:0000559!1.46e-14!63;CL:0002031!1.55e-14!124;CL:0000557!1.89e-14!71;CL:0000988!1.30e-13!182;CL:0000839!1.24e-12!70;CL:0000763!1.26e-12!112;CL:0000049!1.26e-12!112 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.35e-18;33!CL:0002057;3.35e-18;33!CL:0000473;1.83e-14;39!CL:0000234;1.83e-14;39!CL:0000576;6.25e-13;48!CL:0000766;5.42e-09;69!CL:0002087;2.98e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,7.17e-20,42;CL:0002057,7.17e-20,42;CL:0000738,9.83e-20,136;CL:0002009,1.14e-19,61;CL:0000766,8.21e-19,72;CL:0000473,8.63e-19,48;CL:0000234,8.63e-19,48;CL:0002087,8.90e-19,115;CL:0002194,1.56e-18,59;CL:0000576,1.56e-18,59;CL:0000040,1.56e-18,59;CL:0000559,1.56e-18,59;CL:0000557,8.30e-18,67;CL:0002031,2.08e-17,120;CL:0000037,1.37e-16,168;CL:0002032,9.40e-16,161;CL:0000837,9.40e-16,161;CL:0000839,1.22e-15,66;CL:0000988,1.80e-14,177;CL:0000763,9.32e-14,108;CL:0000049,9.32e-14,108 | |||
|ontology_enrichment_development_v019=CL:0002057;6.76e-15;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.79e-13!102;UBERON:0003061!1.79e-13!102;UBERON:0002193!1.04e-12!112;UBERON:0002371!1.60e-11!80;UBERON:0001474!1.76e-10!86;UBERON:0002405!1.54e-09!115;UBERON:0004765!1.60e-09!101;UBERON:0001434!1.60e-09!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.91e-16,98;UBERON:0003061,1.91e-16,98;UBERON:0002193,2.45e-15,108;UBERON:0002371,6.19e-15,76;UBERON:0001474,5.71e-14,82;UBERON:0002405,8.79e-14,93;UBERON:0004765,6.67e-13,90;UBERON:0001434,2.06e-11,100 | |||
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| ||
|short_description=p2@ADAM17 | |||
}} | }} |
Latest revision as of 00:51, 19 September 2015
Short description: | p2@ADAM17 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ADAM17_5end |
Coexpression cluster: | NA |
Association with transcript: | -50bp_to_ENST00000497134, ENST00000538558_5end |
EntrezGene: | ADAM17 |
HGNC: | 195 |
UniProt: | E7EUI5A6H8L4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 7.17e-20 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.17e-20 | 42 |
leukocyte | 9.83e-20 | 136 |
macrophage dendritic cell progenitor | 1.14e-19 | 61 |
myeloid leukocyte | 8.21e-19 | 72 |
defensive cell | 8.63e-19 | 48 |
phagocyte | 8.63e-19 | 48 |
nongranular leukocyte | 8.90e-19 | 115 |
monopoietic cell | 1.56e-18 | 59 |
monocyte | 1.56e-18 | 59 |
monoblast | 1.56e-18 | 59 |
promonocyte | 1.56e-18 | 59 |
granulocyte monocyte progenitor cell | 8.30e-18 | 67 |
hematopoietic lineage restricted progenitor cell | 2.08e-17 | 120 |
hematopoietic stem cell | 1.37e-16 | 168 |
hematopoietic oligopotent progenitor cell | 9.40e-16 | 161 |
hematopoietic multipotent progenitor cell | 9.40e-16 | 161 |
myeloid lineage restricted progenitor cell | 1.22e-15 | 66 |
hematopoietic cell | 1.80e-14 | 177 |
myeloid cell | 9.32e-14 | 108 |
common myeloid progenitor | 9.32e-14 | 108 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.91e-16 | 98 |
blood island | 1.91e-16 | 98 |
hemolymphoid system | 2.45e-15 | 108 |
bone marrow | 6.19e-15 | 76 |
bone element | 5.71e-14 | 82 |
immune system | 8.79e-14 | 93 |
skeletal element | 6.67e-13 | 90 |
skeletal system | 2.06e-11 | 100 |