FFCP PHASE1:Hg19::chr2:9614652..9614697,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:9614652..9614697,+
|short_description=p1@IAH1
|description=CAGE_peak_1_at_IAH1_5end
|association_with_transcript=0bp_to_ENST00000470914,ENST00000492223,ENS...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=285148 | |EntrezGene=285148 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=27696 | |HGNC=27696 | ||
|TSSclassifier=strong | |||
|UniProt=B4DMV3,F8WF34,Q2TAA2 | |UniProt=B4DMV3,F8WF34,Q2TAA2 | ||
|association_with_transcript=0bp_to_ENST00000470914,ENST00000492223,ENST00000495050,ENST00000497473,NM_001039613,uc002qzr.2,uc002qzs.2,uc002qzt.2,uc010yiz.1_5end | |||
|cluster_id=chr2:9614652..9614697,+ | |||
|description=CAGE_peak_1_at_IAH1_5end | |||
|id=chr2:9614652..9614697,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.31e-19!180;CL:0000057!2.40e-12!75;CL:0000680!9.80e-10!57;CL:0000056!9.80e-10!57;CL:0000355!9.80e-10!57;CL:0000187!4.02e-09!54;CL:0000183!5.94e-08!59;CL:0000192!1.31e-07!42;CL:0000514!1.31e-07!42;CL:0000393!1.76e-07!60;CL:0000211!1.76e-07!60 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,8.04e-13,76;CL:0000680,4.30e-10,58;CL:0000056,4.30e-10,58;CL:0000355,4.30e-10,58;CL:0000187,1.77e-09,55;CL:0000192,5.81e-08,43;CL:0000514,5.81e-08,43;CL:0000393,8.45e-08,61;CL:0000211,8.45e-08,61;CL:0000222,9.82e-07,121 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!3.69e-16!83;UBERON:0002329!3.69e-16!83;UBERON:0003077!3.69e-16!83;UBERON:0003059!3.69e-16!83;UBERON:0007282!3.69e-16!83;UBERON:0009618!3.69e-16!83;UBERON:0007285!3.69e-16!83;UBERON:0000486!2.08e-12!82;UBERON:0004290!8.42e-12!70;UBERON:0001134!1.49e-09!61;UBERON:0002036!1.49e-09!61;UBERON:0003082!1.49e-09!61;UBERON:0002385!3.05e-09!63;UBERON:0001015!3.05e-09!63;UBERON:0000383!3.05e-09!63;UBERON:0005256!3.75e-09!143;UBERON:0002100!9.61e-09!216;UBERON:0000475!1.00e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0000075;8.61e-08;16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000486,9.09e-13,83;UBERON:0007524,2.53e-12,73;UBERON:0002329,3.63e-12,71;UBERON:0003059,3.63e-12,71;UBERON:0007282,3.63e-12,71;UBERON:0004290,3.63e-12,71;UBERON:0009618,3.63e-12,71;UBERON:0003077,6.77e-12,72;UBERON:0007285,6.77e-12,72;UBERON:0007503,4.63e-10,78;UBERON:0001134,6.67e-10,62;UBERON:0002036,6.67e-10,62;UBERON:0003082,6.67e-10,62;UBERON:0002385,1.39e-09,64;UBERON:0001015,1.39e-09,64;UBERON:0000383,1.39e-09,64;UBERON:0003104,8.05e-08,160;UBERON:0009142,8.05e-08,160;UBERON:0000075,8.64e-08,16 | |||
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| ||
|short_description=p1@IAH1 | |||
}} | }} |
Latest revision as of 23:52, 18 September 2015
Short description: | p1@IAH1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_IAH1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000470914, ENST00000492223, ENST00000495050, ENST00000497473, NM_001039613, uc002qzr.2, uc002qzs.2, uc002qzt.2, uc010yiz.1_5end |
EntrezGene: | IAH1 |
HGNC: | 27696 |
UniProt: | B4DMV3F8WF34Q2TAA2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 8.04e-13 | 76 |
muscle precursor cell | 4.30e-10 | 58 |
myoblast | 4.30e-10 | 58 |
multi-potent skeletal muscle stem cell | 4.30e-10 | 58 |
muscle cell | 1.77e-09 | 55 |
smooth muscle cell | 5.81e-08 | 43 |
smooth muscle myoblast | 5.81e-08 | 43 |
electrically responsive cell | 8.45e-08 | 61 |
electrically active cell | 8.45e-08 | 61 |
mesodermal cell | 9.82e-07 | 121 |
Ontology term | p-value | n |
---|---|---|
multilaminar epithelium | 9.09e-13 | 83 |
dense mesenchyme tissue | 2.53e-12 | 73 |
somite | 3.63e-12 | 71 |
presomitic mesoderm | 3.63e-12 | 71 |
presumptive segmental plate | 3.63e-12 | 71 |
dermomyotome | 3.63e-12 | 71 |
trunk paraxial mesoderm | 3.63e-12 | 71 |
paraxial mesoderm | 6.77e-12 | 72 |
presumptive paraxial mesoderm | 6.77e-12 | 72 |
epithelial vesicle | 4.63e-10 | 78 |
skeletal muscle tissue | 6.67e-10 | 62 |
striated muscle tissue | 6.67e-10 | 62 |
myotome | 6.67e-10 | 62 |
muscle tissue | 1.39e-09 | 64 |
musculature | 1.39e-09 | 64 |
musculature of body | 1.39e-09 | 64 |
mesenchyme | 8.05e-08 | 160 |
entire embryonic mesenchyme | 8.05e-08 | 160 |
subdivision of skeletal system | 8.64e-08 | 16 |