FFCP PHASE1:Hg19::chr2:86116093..86116172,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:86116093..86116172,-
|short_description=p1@ST3GAL5
|description=CAGE_peak_1_at_ST3GAL5_5end
|association_with_transcript=0bp_to_ENST00000377332,ENST0000043...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8869 | |EntrezGene=8869 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10872 | |HGNC=10872 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UNP4,F8WEA8 | |UniProt=Q9UNP4,F8WEA8 | ||
|association_with_transcript=0bp_to_ENST00000377332,ENST00000433665,NM_003896,uc002sqq.1,uc010ysy.1,uc010ysz.1_5end | |||
|cluster_id=chr2:86116093..86116172,- | |||
|description=CAGE_peak_1_at_ST3GAL5_5end | |||
|id=chr2:86116093..86116172,- | |||
|ontology_enrichment_celltype=CL:0002087!2.13e-07!119 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0002087,7.04e-09,115;CL:0000738,5.57e-08,136;CL:0002031,2.16e-07,120 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!4.60e-20!57;UBERON:0005068!4.60e-20!57;UBERON:0006241!4.60e-20!57;UBERON:0007135!4.60e-20!57;UBERON:0002616!1.77e-18!59;UBERON:0000955!3.70e-18!69;UBERON:0006238!3.70e-18!69;UBERON:0007023!4.73e-17!115;UBERON:0001017!1.99e-16!82;UBERON:0003080!2.62e-16!42;UBERON:0003075!2.71e-16!86;UBERON:0007284!2.71e-16!86;UBERON:0002780!2.93e-16!41;UBERON:0001890!2.93e-16!41;UBERON:0006240!2.93e-16!41;UBERON:0002346!9.97e-16!90;UBERON:0005743!1.76e-15!86;UBERON:0000073!2.03e-14!94;UBERON:0001016!2.03e-14!94;UBERON:0000153!2.28e-14!129;UBERON:0007811!2.28e-14!129;UBERON:0001893!2.08e-13!34;UBERON:0000033!2.45e-13!123;UBERON:0002020!3.64e-13!34;UBERON:0003528!3.64e-13!34;UBERON:0002791!8.74e-13!33;UBERON:0001869!1.10e-12!32;UBERON:0003056!3.19e-12!61;UBERON:0002619!6.04e-12!22;UBERON:0004121!2.61e-11!169;UBERON:0000924!3.81e-11!173;UBERON:0006601!3.81e-11!173;UBERON:0001950!5.16e-11!20;UBERON:0000956!5.17e-09!25;UBERON:0000203!5.17e-09!25;UBERON:0000025!4.79e-07!194 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;6.91e-12;22!UBERON:0002780;9.00e-12;41!UBERON:0001890;9.00e-12;41!UBERON:0001893;1.26e-11;34!UBERON:0001869;2.86e-11;32!UBERON:0003528;3.05e-11;34!UBERON:0002020;3.05e-11;34!UBERON:0002791;4.92e-11;32!UBERON:0001950;5.78e-11;20!UBERON:0000073;7.90e-11;53!UBERON:0002616;7.90e-11;53!UBERON:0000956;5.32e-09;25!UBERON:0000203;5.32e-09;25!UBERON:0001017;5.48e-09;75!UBERON:0000955;1.50e-08;68!UBERON:0001016;6.22e-07;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,5.25e-20,56;UBERON:0005068,5.25e-20,56;UBERON:0006241,5.25e-20,56;UBERON:0007135,5.25e-20,56;UBERON:0000073,1.66e-18,53;UBERON:0002616,1.66e-18,53;UBERON:0000955,4.57e-18,68;UBERON:0006238,4.57e-18,68;UBERON:0007023,1.25e-16,114;UBERON:0001017,2.55e-16,81;UBERON:0002780,2.88e-16,41;UBERON:0001890,2.88e-16,41;UBERON:0003080,2.88e-16,41;UBERON:0006240,2.88e-16,41;UBERON:0010371,3.31e-16,104;UBERON:0001016,4.06e-15,89;UBERON:0003075,5.73e-15,82;UBERON:0007284,5.73e-15,82;UBERON:0002346,1.99e-14,86;UBERON:0001893,2.06e-13,34;UBERON:0003528,3.59e-13,34;UBERON:0002020,3.59e-13,34;UBERON:0001869,1.09e-12,32;UBERON:0010314,1.40e-12,132;UBERON:0003056,2.20e-12,61;UBERON:0002791,2.30e-12,32;UBERON:0002619,5.97e-12,22;UBERON:0001950,5.11e-11,20;UBERON:0004121,2.06e-10,171;UBERON:0000924,2.06e-10,171;UBERON:0006601,2.06e-10,171;UBERON:0000956,5.12e-09,25;UBERON:0000203,5.12e-09,25;UBERON:0000025,4.81e-07,192 | |||
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| ||
|short_description=p1@ST3GAL5 | |||
}} | }} |
Latest revision as of 18:24, 18 September 2015
Short description: | p1@ST3GAL5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ST3GAL5_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000377332, ENST00000433665, NM_003896, uc002sqq.1, uc010ysy.1, uc010ysz.1_5end |
EntrezGene: | ST3GAL5 |
HGNC: | 10872 |
UniProt: | Q9UNP4F8WEA8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nongranular leukocyte | 7.04e-09 | 115 |
leukocyte | 5.57e-08 | 136 |
hematopoietic lineage restricted progenitor cell | 2.16e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
neural tube | 5.25e-20 | 56 |
neural rod | 5.25e-20 | 56 |
future spinal cord | 5.25e-20 | 56 |
neural keel | 5.25e-20 | 56 |
regional part of nervous system | 1.66e-18 | 53 |
regional part of brain | 1.66e-18 | 53 |
brain | 4.57e-18 | 68 |
future brain | 4.57e-18 | 68 |
adult organism | 1.25e-16 | 114 |
central nervous system | 2.55e-16 | 81 |
regional part of forebrain | 2.88e-16 | 41 |
forebrain | 2.88e-16 | 41 |
anterior neural tube | 2.88e-16 | 41 |
future forebrain | 2.88e-16 | 41 |
ecto-epithelium | 3.31e-16 | 104 |
nervous system | 4.06e-15 | 89 |
neural plate | 5.73e-15 | 82 |
presumptive neural plate | 5.73e-15 | 82 |
neurectoderm | 1.99e-14 | 86 |
telencephalon | 2.06e-13 | 34 |
brain grey matter | 3.59e-13 | 34 |
gray matter | 3.59e-13 | 34 |
cerebral hemisphere | 1.09e-12 | 32 |
structure with developmental contribution from neural crest | 1.40e-12 | 132 |
pre-chordal neural plate | 2.20e-12 | 61 |
regional part of telencephalon | 2.30e-12 | 32 |
regional part of cerebral cortex | 5.97e-12 | 22 |
neocortex | 5.11e-11 | 20 |
ectoderm-derived structure | 2.06e-10 | 171 |
ectoderm | 2.06e-10 | 171 |
presumptive ectoderm | 2.06e-10 | 171 |
cerebral cortex | 5.12e-09 | 25 |
pallium | 5.12e-09 | 25 |
tube | 4.81e-07 | 192 |