FFCP PHASE1:Hg19::chr2:85637459..85637495,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:85637459..85637495,-
|short_description=p2@CAPG
|description=CAGE_peak_2_at_CAPG_5end
|association_with_transcript=0bp_to_ENST00000409921,ENST00000459793_5...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=822 | |EntrezGene=822 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1474 | |HGNC=1474 | ||
|TSSclassifier=strong | |||
|UniProt=B8ZZS7 | |UniProt=B8ZZS7 | ||
|association_with_transcript=0bp_to_ENST00000409921,ENST00000459793_5end | |||
|cluster_id=chr2:85637459..85637495,- | |||
|coexpression_cluster_id=C602 | |||
|description=CAGE_peak_2_at_CAPG_5end | |||
|id=chr2:85637459..85637495,- | |||
|ontology_enrichment_celltype=CL:0000037!3.00e-47!172;CL:0000566!3.00e-47!172;CL:0002032!2.70e-45!165;CL:0000837!2.70e-45!165;CL:0000738!2.72e-43!140;CL:0000988!4.26e-42!182;CL:0002031!9.08e-39!124;CL:0000763!1.70e-38!112;CL:0000049!1.70e-38!112;CL:0000766!3.26e-36!76;CL:0002087!3.76e-35!119;CL:0000557!2.38e-34!71;CL:0000839!2.99e-33!70;CL:0002009!6.01e-31!65;CL:0002194!1.17e-29!63;CL:0000576!1.17e-29!63;CL:0000040!1.17e-29!63;CL:0000559!1.17e-29!63;CL:0000860!3.26e-22!45;CL:0002057!3.37e-22!42;CL:0000134!9.80e-10!358;CL:0002320!4.01e-09!365;CL:0000063!1.99e-07!578;CL:0000542!3.07e-07!53;CL:0000051!3.07e-07!53;CL:0000838!4.03e-07!52;CL:0000219!9.56e-07!390 | |||
|ontology_enrichment_celltype_v019=CL:0000473;1.20e-18;39!CL:0000234;1.20e-18;39!CL:0000860;6.59e-18;33!CL:0002057;6.59e-18;33!CL:0000576;1.72e-17;48!CL:0000766;4.01e-16;69!CL:0000763;5.25e-12;100!CL:0000738;7.28e-11;136!CL:0002087;5.79e-10;104!CL:0000988;2.07e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,7.22e-49,168;CL:0002032,9.97e-47,161;CL:0000837,9.97e-47,161;CL:0000738,2.76e-45,136;CL:0000988,1.90e-44,177;CL:0002031,1.65e-40,120;CL:0000763,5.78e-40,108;CL:0000049,5.78e-40,108;CL:0000766,1.84e-38,72;CL:0002087,9.86e-37,115;CL:0000557,1.44e-36,67;CL:0000839,2.08e-35,66;CL:0002009,4.86e-33,61;CL:0002194,1.07e-31,59;CL:0000576,1.07e-31,59;CL:0000040,1.07e-31,59;CL:0000559,1.07e-31,59;CL:0000473,3.01e-27,48;CL:0000234,3.01e-27,48;CL:0000860,6.65e-23,42;CL:0002057,6.65e-23,42;CL:0000134,9.66e-10,354;CL:0002320,6.87e-09,361;CL:0000542,2.01e-07,53;CL:0000051,2.01e-07,53;CL:0000838,2.66e-07,52;CL:0000219,7.11e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;1.04e-16;42!CL:0000049;3.38e-11;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!6.21e-33!102;UBERON:0003061!6.21e-33!102;UBERON:0002371!3.29e-30!80;UBERON:0002193!2.48e-26!112;UBERON:0001474!5.31e-26!86;UBERON:0004765!2.79e-22!101;UBERON:0001434!2.79e-22!101;UBERON:0002405!1.50e-15!115;UBERON:0002384!1.41e-07!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.09e-35,98;UBERON:0003061,2.09e-35,98;UBERON:0002371,2.15e-32,76;UBERON:0002193,3.51e-29,108;UBERON:0001474,4.25e-28,82;UBERON:0002405,6.00e-27,93;UBERON:0004765,1.01e-25,90;UBERON:0001434,4.24e-22,100;UBERON:0002384,1.51e-07,371 | |||
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| ||
|short_description=p2@CAPG | |||
}} | }} |
Latest revision as of 16:11, 18 September 2015
Short description: | p2@CAPG |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CAPG_5end |
Coexpression cluster: | C602_Macrophage_Monocytederived_CD14_Mast_Dendritic_lung_adipose |
Association with transcript: | 0bp_to_ENST00000409921, ENST00000459793_5end |
EntrezGene: | CAPG |
HGNC: | 1474 |
UniProt: | B8ZZS7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 7.22e-49 | 168 |
hematopoietic oligopotent progenitor cell | 9.97e-47 | 161 |
hematopoietic multipotent progenitor cell | 9.97e-47 | 161 |
leukocyte | 2.76e-45 | 136 |
hematopoietic cell | 1.90e-44 | 177 |
hematopoietic lineage restricted progenitor cell | 1.65e-40 | 120 |
myeloid cell | 5.78e-40 | 108 |
common myeloid progenitor | 5.78e-40 | 108 |
myeloid leukocyte | 1.84e-38 | 72 |
nongranular leukocyte | 9.86e-37 | 115 |
granulocyte monocyte progenitor cell | 1.44e-36 | 67 |
myeloid lineage restricted progenitor cell | 2.08e-35 | 66 |
macrophage dendritic cell progenitor | 4.86e-33 | 61 |
monopoietic cell | 1.07e-31 | 59 |
monocyte | 1.07e-31 | 59 |
monoblast | 1.07e-31 | 59 |
promonocyte | 1.07e-31 | 59 |
defensive cell | 3.01e-27 | 48 |
phagocyte | 3.01e-27 | 48 |
classical monocyte | 6.65e-23 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.65e-23 | 42 |
mesenchymal cell | 9.66e-10 | 354 |
connective tissue cell | 6.87e-09 | 361 |
lymphocyte | 2.01e-07 | 53 |
common lymphoid progenitor | 2.01e-07 | 53 |
lymphoid lineage restricted progenitor cell | 2.66e-07 | 52 |
motile cell | 7.11e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.09e-35 | 98 |
blood island | 2.09e-35 | 98 |
bone marrow | 2.15e-32 | 76 |
hemolymphoid system | 3.51e-29 | 108 |
bone element | 4.25e-28 | 82 |
immune system | 6.00e-27 | 93 |
skeletal element | 1.01e-25 | 90 |
skeletal system | 4.24e-22 | 100 |
connective tissue | 1.51e-07 | 371 |