FFCP PHASE1:Mm9::chr11:32355121..32355140,+: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=327900 | |EntrezGene=327900 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=52 | |MCL_coexpression_id=52 | ||
|TSSclassifier=NA | |||
|UniProt=Q6PGH0 | |UniProt=Q6PGH0 | ||
|association_with_transcript=-229bp_to_ENSMUST00000051053_5end | |association_with_transcript=-229bp_to_ENSMUST00000051053_5end | ||
|cluster_id=chr11:32355121..32355140,+ | |||
|description=CAGE_peak_3_at_Ubtd2_5end | |description=CAGE_peak_3_at_Ubtd2_5end | ||
|id=chr11:32355121..32355140,+ | |id=chr11:32355121..32355140,+ |
Latest revision as of 07:31, 27 September 2015
Short description: | p3@Ubtd2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Ubtd2_5end |
Coexpression cluster: | MCL_coexpression_mm9:52 |
Association with transcript: | -229bp_to_ENSMUST00000051053_5end |
EntrezGene: | Ubtd2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p3@Ubtd2 |
---|
0
5
10
15
20
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 6.79e-11 | 23 |
neuroblast (sensu Vertebrata) | 6.79e-11 | 23 |
neuron | 1.63e-08 | 33 |
neuronal stem cell | 1.63e-08 | 33 |
neuroblast | 1.63e-08 | 33 |
electrically signaling cell | 1.63e-08 | 33 |
ectodermal cell | 3.10e-07 | 44 |
neurectodermal cell | 3.10e-07 | 44 |
Showing 1 to 8 of 8 entries
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 3.79e-10 | 54 |
ecto-epithelium | 5.35e-10 | 73 |
central nervous system | 2.54e-09 | 73 |
ectoderm-derived structure | 2.84e-09 | 95 |
ectoderm | 2.84e-09 | 95 |
presumptive ectoderm | 2.84e-09 | 95 |
gray matter | 4.26e-09 | 34 |
neural tube | 9.00e-09 | 52 |
neural rod | 9.00e-09 | 52 |
future spinal cord | 9.00e-09 | 52 |
Showing 1 to 10 of 21 entries