FFCP PHASE1:Hg19::chr2:69871079..69871100,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:69871079..69871100,-
|short_description=p6@AAK1
|description=CAGE_peak_6_at_AAK1_5end
|association_with_transcript=0bp_to_ENST00000471775,ENST00000495239_5...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=22848 | |EntrezGene=22848 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19679 | |HGNC=19679 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000471775,ENST00000495239_5end | |||
|cluster_id=chr2:69871079..69871100,- | |||
|coexpression_cluster_id=C4243 | |||
|description=CAGE_peak_6_at_AAK1_5end | |||
|id=chr2:69871079..69871100,- | |||
|ontology_enrichment_celltype=CL:0000791!8.52e-12!18;CL:0000789!8.52e-12!18;CL:0002420!8.52e-12!18;CL:0002419!8.52e-12!18;CL:0000790!8.52e-12!18;CL:0000084!1.70e-10!25;CL:0000827!1.70e-10!25;CL:0000625!3.02e-08!11 | |||
|ontology_enrichment_celltype_v019=CL:0000791;1.17e-26;18!CL:0000789;1.17e-26;18!CL:0002419;1.17e-26;18!CL:0000084;4.93e-20;25!CL:0000625;2.25e-18;11!CL:0000624;7.84e-12;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,9.32e-27,18;CL:0000789,9.32e-27,18;CL:0002420,9.32e-27,18;CL:0002419,9.32e-27,18;CL:0000790,9.32e-27,18;CL:0000084,4.35e-20,25;CL:0000827,4.35e-20,25;CL:0000625,1.89e-18,11;CL:0000624,7.36e-12,6;CL:0000838,5.12e-10,52;CL:0000542,1.03e-09,53;CL:0000051,1.03e-09,53 | |||
|ontology_enrichment_development_v019=CL:0000790;1.17e-26;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.01e-18!115;UBERON:0001049!3.27e-16!57;UBERON:0005068!3.27e-16!57;UBERON:0006241!3.27e-16!57;UBERON:0007135!3.27e-16!57;UBERON:0002780!1.20e-13!41;UBERON:0001890!1.20e-13!41;UBERON:0006240!1.20e-13!41;UBERON:0002616!1.22e-13!59;UBERON:0003080!8.78e-13!42;UBERON:0000955!2.89e-12!69;UBERON:0006238!2.89e-12!69;UBERON:0002020!3.40e-12!34;UBERON:0003528!3.40e-12!34;UBERON:0001893!1.22e-11!34;UBERON:0001017!1.67e-11!82;UBERON:0001869!2.19e-11!32;UBERON:0002791!3.32e-11!33;UBERON:0002619!5.26e-11!22;UBERON:0005743!1.39e-10!86;UBERON:0001950!2.98e-10!20;UBERON:0000073!4.96e-10!94;UBERON:0001016!4.96e-10!94;UBERON:0003075!6.26e-10!86;UBERON:0007284!6.26e-10!86;UBERON:0000956!6.38e-10!25;UBERON:0000203!6.38e-10!25;UBERON:0002346!1.47e-09!90;UBERON:0003056!2.69e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;8.84e-23;20!UBERON:0002619;1.31e-22;22!UBERON:0003528;2.13e-19;34!UBERON:0002020;2.13e-19;34!UBERON:0000956;2.63e-19;25!UBERON:0000203;2.63e-19;25!UBERON:0001893;6.54e-19;34!UBERON:0002791;1.03e-18;32!UBERON:0001869;1.03e-18;32!UBERON:0002780;2.78e-14;41!UBERON:0001890;2.78e-14;41!UBERON:0000073;3.99e-12;53!UBERON:0002616;3.99e-12;53!UBERON:0000178;1.98e-11;15!UBERON:0000179;1.98e-11;15!UBERON:0000463;1.98e-11;15!UBERON:0000200;2.67e-09;6!UBERON:0001871;5.23e-08;6!UBERON:0001872;1.44e-07;5!UBERON:0000955;1.46e-07;68!UBERON:0001017;2.28e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003528,9.45e-24,34;UBERON:0002020,9.45e-24,34;UBERON:0001950,4.77e-23,20;UBERON:0002619,5.23e-23,22;UBERON:0001893,8.33e-22,34;UBERON:0001869,9.11e-22,32;UBERON:0002791,1.30e-21,32;UBERON:0000073,4.86e-21,53;UBERON:0002616,4.86e-21,53;UBERON:0001049,7.63e-21,56;UBERON:0005068,7.63e-21,56;UBERON:0006241,7.63e-21,56;UBERON:0007135,7.63e-21,56;UBERON:0002780,2.85e-20,41;UBERON:0001890,2.85e-20,41;UBERON:0003080,2.85e-20,41;UBERON:0006240,2.85e-20,41;UBERON:0000956,1.19e-19,25;UBERON:0000203,1.19e-19,25;UBERON:0007023,1.79e-17,114;UBERON:0000955,3.64e-15,68;UBERON:0006238,3.64e-15,68;UBERON:0003056,1.80e-13,61;UBERON:0003075,2.41e-13,82;UBERON:0007284,2.41e-13,82;UBERON:0001017,3.12e-13,81;UBERON:0002346,2.72e-12,86;UBERON:0000178,5.62e-12,15;UBERON:0000179,5.62e-12,15;UBERON:0000463,5.62e-12,15;UBERON:0001016,5.08e-11,89;UBERON:0000200,1.14e-09,6;UBERON:0010371,1.23e-08,104;UBERON:0001871,2.05e-08,6;UBERON:0001872,2.22e-07,5 | |||
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| ||
|short_description=p6@AAK1 | |||
}} | }} |
Latest revision as of 04:20, 18 September 2015
Short description: | p6@AAK1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_AAK1_5end |
Coexpression cluster: | C4243_CD4_cerebellum_CD8_medial_Peripheral_occipital_parietal |
Association with transcript: | 0bp_to_ENST00000471775, ENST00000495239_5end |
EntrezGene: | AAK1 |
HGNC: | 19679 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 9.32e-27 | 18 |
alpha-beta T cell | 9.32e-27 | 18 |
immature T cell | 9.32e-27 | 18 |
mature T cell | 9.32e-27 | 18 |
immature alpha-beta T cell | 9.32e-27 | 18 |
T cell | 4.35e-20 | 25 |
pro-T cell | 4.35e-20 | 25 |
CD8-positive, alpha-beta T cell | 1.89e-18 | 11 |
CD4-positive, alpha-beta T cell | 7.36e-12 | 6 |
lymphoid lineage restricted progenitor cell | 5.12e-10 | 52 |
lymphocyte | 1.03e-09 | 53 |
common lymphoid progenitor | 1.03e-09 | 53 |
Ontology term | p-value | n |
---|---|---|
brain grey matter | 9.45e-24 | 34 |
gray matter | 9.45e-24 | 34 |
neocortex | 4.77e-23 | 20 |
regional part of cerebral cortex | 5.23e-23 | 22 |
telencephalon | 8.33e-22 | 34 |
cerebral hemisphere | 9.11e-22 | 32 |
regional part of telencephalon | 1.30e-21 | 32 |
regional part of nervous system | 4.86e-21 | 53 |
regional part of brain | 4.86e-21 | 53 |
neural tube | 7.63e-21 | 56 |
neural rod | 7.63e-21 | 56 |
future spinal cord | 7.63e-21 | 56 |
neural keel | 7.63e-21 | 56 |
regional part of forebrain | 2.85e-20 | 41 |
forebrain | 2.85e-20 | 41 |
anterior neural tube | 2.85e-20 | 41 |
future forebrain | 2.85e-20 | 41 |
cerebral cortex | 1.19e-19 | 25 |
pallium | 1.19e-19 | 25 |
adult organism | 1.79e-17 | 114 |
brain | 3.64e-15 | 68 |
future brain | 3.64e-15 | 68 |
pre-chordal neural plate | 1.80e-13 | 61 |
neural plate | 2.41e-13 | 82 |
presumptive neural plate | 2.41e-13 | 82 |
central nervous system | 3.12e-13 | 81 |
neurectoderm | 2.72e-12 | 86 |
blood | 5.62e-12 | 15 |
haemolymphatic fluid | 5.62e-12 | 15 |
organism substance | 5.62e-12 | 15 |
nervous system | 5.08e-11 | 89 |
gyrus | 1.14e-09 | 6 |
ecto-epithelium | 1.23e-08 | 104 |
temporal lobe | 2.05e-08 | 6 |
parietal lobe | 2.22e-07 | 5 |