FFCP PHASE1:Hg19::chr2:54785154..54785170,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:54785154..54785170,+
|short_description=p21@SPTBN1
|description=CAGE_peak_21_at_SPTBN1_5end
|association_with_transcript=-360bp_to_ENST00000333896,NM_17831...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6711 | |EntrezGene=6711 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11275 | |HGNC=11275 | ||
|TSSclassifier=strong | |||
|UniProt=Q01082 | |UniProt=Q01082 | ||
|association_with_transcript=-360bp_to_ENST00000333896,NM_178313,uc002rxx.2_5end | |||
|cluster_id=chr2:54785154..54785170,+ | |||
|description=CAGE_peak_21_at_SPTBN1_5end | |||
|id=chr2:54785154..54785170,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.56e-14!254;CL:0000542!3.77e-13!53;CL:0000051!3.77e-13!53;CL:0000838!9.03e-13!52;CL:0000223!6.58e-11!59;CL:0000945!8.61e-10!24;CL:0000826!8.61e-10!24;CL:0002076!6.70e-08!43;CL:0000063!2.78e-07!578 | |||
|ontology_enrichment_celltype_v019=CL:0000945;4.42e-16;24!CL:0000236;1.18e-09;13!CL:0000542;1.29e-09;53!CL:0000182;6.24e-08;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,6.19e-16,24;CL:0000826,6.19e-16,24;CL:0000838,9.82e-16,52;CL:0000542,2.45e-15,53;CL:0000051,2.45e-15,53;CL:0000236,1.82e-11,14;CL:0000223,2.80e-10,58;CL:0000182,8.43e-08,12 | |||
|ontology_enrichment_development_v019=UBERON:0009497;1.96e-12;13!UBERON:0004161;1.30e-11;11!CL:0000051;1.29e-09;53 | |||
|ontology_enrichment_disease=DOID:305!3.90e-12!106;DOID:0050687!2.09e-08!143;DOID:162!1.01e-07!235;DOID:14566!3.37e-07!239 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005911!2.42e-08!82;UBERON:0004119!9.80e-08!169;UBERON:0000925!9.80e-08!169;UBERON:0006595!9.80e-08!169;UBERON:0001007!4.09e-07!155;UBERON:0001555!4.09e-07!155;UBERON:0007026!4.09e-07!155;UBERON:0001041!9.39e-07!98 | |||
|ontology_enrichment_uberon_v019=UBERON:0002423;7.39e-11;25!UBERON:0002107;4.85e-08;19!UBERON:0006925;4.85e-08;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0009497,8.39e-11,25;UBERON:0000015,8.39e-11,25;UBERON:0002423,8.39e-11,25;UBERON:0006235,8.39e-11,25;UBERON:0004161,8.39e-11,25;UBERON:0008835,1.64e-10,22;UBERON:0003894,1.64e-10,22;UBERON:0009854,5.82e-10,23;UBERON:0007499,5.37e-09,25;UBERON:0009856,1.43e-08,26;UBERON:0002107,6.73e-08,19;UBERON:0006925,6.73e-08,19;UBERON:0008836,6.73e-08,19;UBERON:0005911,4.56e-07,82 | |||
|phase1_expression=0.54503513781167,0,0.563817616383885,0,0.446961094427288,1.74467704820074,0,0,0,0.491467873003018,0,2.18441372130172,0.791300934685361,0.123766352960047,0,0,0,0,0,0.123121058076788,0,0,0.286235987131057,0.136874425072884,0.376627918784408,1.68109492645493,1.06730766284929,1.33808328233255,0,0.767658796194425,0,1.83884244895785,1.204823675113,0.369754010166788,0.154934401160603,0.710846162437108,0.880801318004542,1.10799081706375,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0.47296445977717,0,0,0,0,0.272906150057846,0,0,0,0,0.329851300186716,0.398927315243264,0.426224750532694,0,0.56738522469114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.51992488922645,0,0.889509253863555,1.28019066769952,1.20118796110804,1.72425731986345,0.661044872784862,0,1.1384259382189,3.52342313622563,0.764546456250458,1.32171328579026,2.24203425192614,0.790152254325231,1.96709770113833,0.786021525498329,1.23360899399706,0.668745981562712,1.62961133316795,0.946895611469467,1.94826728407911,0,0,0.221533894583621,0,0.25618263945135,0.390178042679635,0.164437904603676,0.829050053357545,1.15921234294021,0.593146252648242,1.60524496853828,0,0.566546713487831,0.766440987203842,0.68725489096526,0.506039384039006,0.318565414324097,0,0,0.752875595388864,0.895906278080929,0,0.473554504088034,0,2.01606743224732,0.534880391567015,0.868946423296794,0,0,0.12786256184353,0,0.50133791063589,0,0,0,0.0945348171640679,0.443458794925128,0.614843499851882,0.327447688744282,0.364295288292542,0.370784442784429,0,0,0,0.715471872916026,0.571994910780128,0.74291500265913,0.198762407366705,0,0,0,0,0.550236083880135,0.208994966536811,0,0,0.33472061276467,0,0,0.24406205754817,0,0,0.357198913136319,0,0,0,0,0.183201743930407,0,0,0.436094052142534,0,0.506522046658319,0.132409180813219,0.286836620748814,0.354668382198357,0,0,0.74000264525148,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0.140450806702248,0.204154171254893,0.122834317311768,0.103325781175765,0,0,0,0,0.168336113954066,0,0,0,0.30648779579902,0,0.680593098960126,0,0.213557388818567,0.211931901159562,0.300091096084402,0,0,0,0,0.194874010322397,0.252433774244115,0,0,0,0,0,0.57978255948989,0,0.573609190778008,0,0.132529768321485,0.116193942869518,0.10366105501537,0,0,1.56449532329816,0,0,0,0,0.828147600278907,0.505754070234305,0,0.55146986366197,0.435758888184812,0,0.269662616320329,0,0.38474715694639,0,0,0,0,1.26755034821831,0.982827216677626,1.18157981336281,0,0.737930631258681,0.171567810298526,0.109750285408626,1.1240175325762,0.201057944823262,0.370353780634118,0,0,0,0,0.234817388471643,0.433099343283221,0,0.190254152234598,0,0,0,0,0,0,0.503946384596579,0.850650583454319,0.179117045405697,1.16253575405585,0,0,0,0,0,0.25248486685276,0.063497894292169,0,0,0,0.514137463516618,0.600686115687835,0.285826432630578,0.336393253036082,0.43596006883328,0.51336800074665,0.387815147273333,0,0,0,0,0,0,0.266422179016099,0.57191197463259,0,0,0,0.355391948742546,0,0.301439377059586,0.871533458600294,0.499864955910285,0,0,0,0,0,0,0,0.205476322550383,0,0.336255431980582,0.197030760201927,1.50939302401662,0.898401253958239,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0.178428988797162,0.157702415033935,0,0,0,0,0.664225598535437,0.184369168541703,0,0.195801157462741,0,0.82707210449155,0.862856803274467,0.426910231213777,0.303127571446259,0,0.604780586659361,0.496215615637554,0.920771839728375,0.280660094433074,0.768834895534206,0,0.321707842287215,0,0,0,0.0821271560138091,0.519254429183621,0.116210378459959,0.966875596732978,1.20303882181971,1.01289087829486,0,0.182091168006717,0,0,1.00119938235739,0,1.46139224653261,1.47772280450026,0,0.680374821106063,1.0795795805107,0,0.541892875087706,0,0.509752546090077,0,0.223874754722178,0,0,0.256450125116389,0.328014645699706,0,1.03041011647722,0,0.082509499920588,0.574265537996172,0,0,0,0,0,0.275673144969061,0,0.145016693914229,0.170453254832202,0,2.14870389969272,0.192190067365106,0.510450849978337,1.2138933702666,0,1.25924938732256,0,0,0.532306030317022,0,0.18532421910392,0,0,0,0.190630193923825,0,0,0,0,0.179872457583315,0.274537029736055,0,0.202182481573316,0,0.421258456238981,0,0.243713489631284,0,0,0,0,0,0,0.438450885253763,0,0,0.202910376962704,0.30982349809975,0.563391205064483,0.143411352204052,0.196498082026242,0.35667105148125,0,0,0,0,0.349934720244983,0.288666338176536,1.34060455107157,0,1.03558180854457,1.29151611801369,0,0,0,0,0,0.569647187174163,0.238231775457789,0.411362273086194,0,0,0,0.427296284509893,0,0.490080431962063,0.743212700502875,6.34784537096357,0.355709216742071,2.07254154547469,0.59873811429845,0,0.423347165447766,1.62310970137278,0.280797178113459,0.456469358066384,0.94007937463814,0,0.50787533340481,0,0,0,0,0,0,0.166849141711909,0.19538809540204,0,0,0,0,0,0,0,0.242721043499027,0.334330152832435,0.852408440419239,0.95497793895076,0.296964680832639,0.614321404198464,0,0,0.222617410045812,0.494411622680279,0.844501632511974,0.19924798825107,0.276283915531148,0.503865495708552,0,0.984678443688556,0,0.539210106883961,1.7902117467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| ||
|short_description=p21@SPTBN1 | |||
}} | }} |
Latest revision as of 15:46, 17 September 2015
Short description: | p21@SPTBN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_21_at_SPTBN1_5end |
Coexpression cluster: | NA |
Association with transcript: | -360bp_to_ENST00000333896, NM_178313, uc002rxx.2_5end |
EntrezGene: | SPTBN1 |
HGNC: | 11275 |
UniProt: | Q01082 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 6.19e-16 | 24 |
pro-B cell | 6.19e-16 | 24 |
lymphoid lineage restricted progenitor cell | 9.82e-16 | 52 |
lymphocyte | 2.45e-15 | 53 |
common lymphoid progenitor | 2.45e-15 | 53 |
B cell | 1.82e-11 | 14 |
endodermal cell | 2.80e-10 | 58 |
hepatocyte | 8.43e-08 | 12 |
Ontology term | p-value | n |
---|---|---|
epithelium of foregut-midgut junction | 8.39e-11 | 25 |
anatomical boundary | 8.39e-11 | 25 |
hepatobiliary system | 8.39e-11 | 25 |
foregut-midgut junction | 8.39e-11 | 25 |
septum transversum | 8.39e-11 | 25 |
hepatic diverticulum | 1.64e-10 | 22 |
liver primordium | 1.64e-10 | 22 |
digestive tract diverticulum | 5.82e-10 | 23 |
epithelial sac | 5.37e-09 | 25 |
sac | 1.43e-08 | 26 |
liver | 6.73e-08 | 19 |
digestive gland | 6.73e-08 | 19 |
liver bud | 6.73e-08 | 19 |
endo-epithelium | 4.56e-07 | 82 |