FFCP PHASE1:Hg19::chr2:46656347..46656363,+: Difference between revisions
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|id=chr2:46656347..46656363,+
|short_description=p2@LOC388946
|description=CAGE_peak_2_at_LOC388946_5end
|association_with_transcript=13bp_to_ENST00000432241,uc002r...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=388946 | |EntrezGene=388946 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=13bp_to_ENST00000432241,uc002rux.2_5end | |||
|cluster_id=chr2:46656347..46656363,+ | |||
|coexpression_cluster_id=C159 | |||
|description=CAGE_peak_2_at_LOC388946_5end | |||
|id=chr2:46656347..46656363,+ | |||
|ontology_enrichment_celltype=CL:0002541!1.22e-28!3;CL:0000039!2.31e-22!7;CL:0000586!2.31e-22!7 | |||
|ontology_enrichment_celltype_v019=CL:0000039;1.18e-30;7!CL:0000586;1.18e-30;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,1.22e-30,7;CL:0000586,1.22e-30,7 | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.01e-32;10!UBERON:0005564;1.01e-32;10!UBERON:0003124;5.42e-15;1 | |||
|ontology_enrichment_disease=DOID:1036!1.94e-11!8;DOID:2355!9.97e-11!1;DOID:3095!3.01e-07!22;DOID:2994!3.01e-07!22 | |||
|ontology_enrichment_disease_v019=DOID:1036;1.52e-15;8!DOID:2355;2.57e-14;1!DOID:3095;5.64e-10;22!DOID:2994;5.64e-10;22!DOID:74;8.32e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,1.56e-15,8;DOID:2355,3.15e-14,1;DOID:3095,5.70e-10,22;DOID:2994,5.70e-10,22;DOID:74,9.19e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0000473!1.14e-29!8;UBERON:0000476!1.22e-28!3;UBERON:0000920!1.22e-28!3;UBERON:0003124!6.16e-22!7;UBERON:0003135!1.40e-21!11;UBERON:0000991!2.88e-11!21;UBERON:0009196!2.88e-11!21;UBERON:0009117!2.88e-11!21;UBERON:0005564!2.88e-11!21;UBERON:0005631!4.28e-11!14;UBERON:0000158!4.28e-11!14;UBERON:0004176!9.48e-11!22;UBERON:0003101!9.48e-11!22;UBERON:0000079!9.48e-11!22;UBERON:0003133!8.99e-07!48 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;7.46e-41;8!UBERON:0003135;9.18e-30;11!UBERON:0000991;1.24e-15;21!UBERON:0003101;6.34e-15;22!UBERON:0000079;6.34e-15;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,8.45e-41,8;UBERON:0003135,1.00e-29,11;UBERON:0000991,1.30e-15,21;UBERON:0009196,1.30e-15,21;UBERON:0009117,1.30e-15,21;UBERON:0005564,1.30e-15,21;UBERON:0004176,6.63e-15,22;UBERON:0003101,6.63e-15,22;UBERON:0000079,6.63e-15,22;UBERON:0003133,1.28e-09,48;UBERON:0003124,1.42e-08,7;UBERON:0005156,9.21e-08,59;UBERON:0000990,9.21e-08,59;UBERON:0002323,4.18e-07,46 | |||
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|short_description=p2@LOC388946 | |||
}} | }} |
Latest revision as of 10:50, 17 September 2015
Short description: | p2@LOC388946 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_LOC388946_5end |
Coexpression cluster: | C159_choriocarcinoma_pancreatic_placenta_chorionic_testicular_bronchioalveolar_seminal |
Association with transcript: | 13bp_to_ENST00000432241, uc002rux.2_5end |
EntrezGene: | LOC388946 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 1.22e-30 | 7 |
germ cell | 1.22e-30 | 7 |
Ontology term | p-value | n |
---|---|---|
testis | 8.45e-41 | 8 |
male reproductive organ | 1.00e-29 | 11 |
gonad | 1.30e-15 | 21 |
indifferent external genitalia | 1.30e-15 | 21 |
indifferent gonad | 1.30e-15 | 21 |
gonad primordium | 1.30e-15 | 21 |
external genitalia | 6.63e-15 | 22 |
male organism | 6.63e-15 | 22 |
male reproductive system | 6.63e-15 | 22 |
reproductive organ | 1.28e-09 | 48 |
chorion | 1.42e-08 | 7 |
reproductive structure | 9.21e-08 | 59 |
reproductive system | 9.21e-08 | 59 |
body cavity | 4.18e-07 | 46 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 1.56e-15 | 8 |
anemia | 3.15e-14 | 1 |
germ cell and embryonal cancer | 5.70e-10 | 22 |
germ cell cancer | 5.70e-10 | 22 |
hematopoietic system disease | 9.19e-08 | 2 |