FFCP PHASE1:Mm9::chr12:88855265..88855269,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=100039076,100039129,640794,641136,666806,666862 | |EntrezGene=100039076,100039129,640794,641136,666806,666862 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=46 | |MCL_coexpression_id=46 | ||
|TSSclassifier=NA | |||
|UniProt=Q3UTA4,D3Z367 | |UniProt=Q3UTA4,D3Z367 | ||
|association_with_transcript=0bp_to_ENSMUST00000110152,NM_001177565,uc011ypn.1_5end | |association_with_transcript=0bp_to_ENSMUST00000110152,NM_001177565,uc011ypn.1_5end | ||
|cluster_id=chr12:88855265..88855269,+ | |||
|description=CAGE_peak_1_at_Gm2035_5end,CAGE_peak_1_at_Gm2056_5end,CAGE_peak_1_at_Gm8300_5end,CAGE_peak_1_at_Gm8332_5end,CAGE_peak_1_at_LOC640794_5end,CAGE_peak_1_at_LOC641136_5end | |description=CAGE_peak_1_at_Gm2035_5end,CAGE_peak_1_at_Gm2056_5end,CAGE_peak_1_at_Gm8300_5end,CAGE_peak_1_at_Gm8332_5end,CAGE_peak_1_at_LOC640794_5end,CAGE_peak_1_at_LOC641136_5end | ||
|id=chr12:88855265..88855269,+ | |id=chr12:88855265..88855269,+ | ||
|ontology_enrichment_celltype=CL:0000325!2.35e-07!2;CL:0000217!2.35e-07!2;CL:0000328!2.35e-07!2;CL:0002573!2.35e-07!2;CL:0002376!2.35e-07!2;CL:0000218!2.35e-07!2;CL:0000692!2.35e-07!2;CL:0002377!2.35e-07!2;CL:0002375!2.35e-07!2 | |ontology_enrichment_celltype=CL:0000325!2.35e-07!2;CL:0000217!2.35e-07!2;CL:0000328!2.35e-07!2;CL:0002573!2.35e-07!2;CL:0002376!2.35e-07!2;CL:0000218!2.35e-07!2;CL:0000692!2.35e-07!2;CL:0002377!2.35e-07!2;CL:0002375!2.35e-07!2 | ||
|ontology_enrichment_celltype_v019_2=CL:0002293,1.12e-15,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000305!3.62e-14!1 | |ontology_enrichment_uberon=UBERON:0000305!3.62e-14!1 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000305,2.74e-44,1;UBERON:0005631,8.02e-16,3;UBERON:0000478,8.02e-16,3;UBERON:0000158,8.02e-16,3;UBERON:0004871,8.02e-16,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,1.28326477414318,0,0,0.649473123033642,0,0,0,0,0,0,0,0,0,0,0,3.95511948374998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,1.28326477414318,0,0,0.649473123033642,0,0,0,0,0,0,0,0,0,0,0,3.95511948374998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p1@Gm2035,p1@Gm2056,p1@Gm8300,p1@Gm8332,p1@LOC640794,p1@LOC641136 | |short_description=p1@Gm2035,p1@Gm2056,p1@Gm8300,p1@Gm8332,p1@LOC640794,p1@LOC641136 | ||
}} | }} |
Latest revision as of 23:41, 26 September 2015
Short description: | p1@Gm2035, p1@Gm2056, p1@Gm8300, p1@Gm8332, p1@LOC640794, p1@LOC641136 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Gm2035_5end, CAGE_peak_1_at_Gm2056_5end, CAGE_peak_1_at_Gm8300_5end, CAGE_peak_1_at_Gm8332_5end, CAGE_peak_1_at_LOC640794_5end, CAGE_peak_1_at_LOC641136_5end |
Coexpression cluster: | MCL_coexpression_mm9:46 |
Association with transcript: | 0bp_to_ENSMUST00000110152, NM_001177565, uc011ypn.1_5end |
EntrezGene: | 100039076,100039129,640794,641136,666806,666862 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of thymus | 1.12e-15 | 3 |
Ontology term | p-value | n |
---|---|---|
amnion | 2.74e-44 | 1 |
extraembryonic membrane | 8.02e-16 | 3 |
extraembryonic structure | 8.02e-16 | 3 |
membranous layer | 8.02e-16 | 3 |
somatic layer of lateral plate mesoderm | 8.02e-16 | 3 |