FFCP PHASE1:Hg19::chr2:30454572..30454585,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr2:30454572..30454585,+
|short_description=p5@LBH
|description=CAGE_peak_5_at_LBH_5end
|association_with_transcript=169bp_to_ENST00000404397,ENST00000406087,E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=81606 | |EntrezGene=81606 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29532 | |HGNC=29532 | ||
|TSSclassifier=strong | |||
|UniProt=B5MC28,B5MCM2 | |UniProt=B5MC28,B5MCM2 | ||
|association_with_transcript=169bp_to_ENST00000404397,ENST00000406087,ENST00000464412_5end | |||
|cluster_id=chr2:30454572..30454585,+ | |||
|coexpression_cluster_id=C4220 | |||
|description=CAGE_peak_5_at_LBH_5end | |||
|id=chr2:30454572..30454585,+ | |||
|ontology_enrichment_celltype=CL:0000838!3.88e-07!52;CL:0000542!4.33e-07!53;CL:0000051!4.33e-07!53;CL:0000791!4.73e-07!18;CL:0000789!4.73e-07!18;CL:0002420!4.73e-07!18;CL:0002419!4.73e-07!18;CL:0000790!4.73e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000791;2.77e-08;18!CL:0000789;2.77e-08;18!CL:0002419;2.77e-08;18!CL:0000236;1.31e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,7.57e-09,18;CL:0000789,7.57e-09,18;CL:0002420,7.57e-09,18;CL:0002419,7.57e-09,18;CL:0000790,7.57e-09,18;CL:0000838,7.74e-09,52;CL:0000542,1.55e-08,53;CL:0000051,1.55e-08,53;CL:0000236,4.06e-07,14 | |||
|ontology_enrichment_development_v019=CL:0000790;2.77e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;4.02e-09;6!UBERON:0002358;4.02e-09;6!UBERON:0003684;4.02e-09;6!UBERON:0001178;4.02e-09;6!UBERON:0004457;3.38e-07;9!UBERON:0000042;3.38e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,3.79e-09,6;UBERON:0002358,3.79e-09,6;UBERON:0003684,3.79e-09,6;UBERON:0001178,3.79e-09,6 | |||
|phase1_expression=4.1786027232228,21.6241529129893,4.79244973926302,26.0190575718139,15.6436383049551,12.2127393374052,5.06599756336621,0.631719873426831,0.261185628199839,0.491467873003018,0.697801167972428,0,0.791300934685361,0,0,0.672325146451775,1.20538905604795,0,0,0.246242116153576,0.408001382488506,0.626909442956176,0.572471974262113,0.547497700291537,0.502170558379211,0.993374274723366,0.738905305049512,0.550975469195755,0.786728553697808,0.767658796194425,0,0,0,0,0,0,0,0,0.401088894940283,0.217010870715852,0,0,0.257575567634187,0.145398238779565,0.377875943688809,0.242584061187816,0,0,0.309706370895104,0,0,0,0.344745680736619,0,0,0,0,0,0,0,0,0,0,0,0,0.56738522469114,0.622822248995575,0,0,0.217188844705117,1.21079900526674,0,0.316462387440884,0,0.212604299965044,0,0,0,0,0,0,0,1.75996244461323,6.00752472388345,1.77901850772711,1.28019066769952,4.40435585739614,4.02326707968138,5.2883589822789,1.90810750907073,0.569212969109448,0.587237189370939,1.91136614062614,0,0,0,0.196709770113833,1.96505381374582,1.43921049299656,1.5046784585161,1.62961133316795,2.8406868344084,5.84480185223734,1.11410456885174,2.65145316727353,2.21533894583621,3.24964636518019,1.66518715643378,0.910415432919148,2.13769275984779,2.21080014228679,1.73881851441031,3.41059095272739,5.35081656179426,7.31748666634838,0.906474741580529,2.68254345521345,1.71813722741315,1.51811815211702,4.14135038621326,0,1.90090408889675,2.86092726247768,2.17577238962511,6.24653632761729,1.89421801635213,0.821127996921047,0.201606743224732,1.87208137048455,1.59306844271079,0,0,0.255725123687061,0.361439152384566,0.50133791063589,2.60723734129483,0,4.37971383272372,0.283604451492204,1.33037638477538,0.87834785693126,0.523916301990851,0,0.370784442784429,0,0,0,0.715471872916026,0.571994910780128,0,0,0,0,0,0.419499436209906,0,0,0,0,0.33472061276467,0.402829317109147,0.760272105718513,0.24406205754817,0,0,0,0.22452937262617,0,0,0,0,0,0,0,0.496971951695318,1.13967460498122,0,1.43418310374407,1.41867352879343,2.80338800071154,1.06748995729705,0.98667019366864,0,0.134710672069688,0,0,0.576175924479999,0,0,0,0,0.352303495931295,0.161872944368132,0.140450806702248,0,0.122834317311768,0,0,0.741800787835671,0,0,0,0,0,0,1.83892677479412,0.600952235626387,0.113432183160021,0.89694817844431,3.41691822109708,0.847727604638247,2.10063767259082,2.37020817248409,3.86460810068444,4.28068769562657,0.843881661206331,3.11798416515836,1.7670364197088,3.49789614840738,0.161646056818812,2.4850671476163,3.82857973265033,1.52604533079439,0.193260853163297,0,0,0.609868530647977,0.927708378250397,1.97529702878181,0.725627385107593,1.51392510525377,0.36497735907583,0,3.21620469096443,0,2.3218396401599,2.16563844500876,0,0.168584690078102,0.241011029883482,0,0.217879444092406,0,0,0,0,1.4763109092493,1.40241773803446,0,0,0,0,0.590789906681404,0.882926198829301,1.22988438543114,0.343135620597051,0.109750285408626,0,0,0.185176890317059,0,0,1.44331342025273,0.231860809950154,0.117408694235822,0.288732895522148,0,0.570762456703795,0,0,0,0,0,0,0,0,0,0,0,0.985326475791887,0.528290604079356,0,0.144119953416961,0.12624243342638,0.063497894292169,0,0,0,0.411309970813294,0,0.857479297891735,0,0,0,0,0,0,3.45719551560332,12.4808924293639,0,0,0,0.285955987316295,0,0,0,0.710783897485092,0,0.301439377059586,0.871533458600294,0.099972991182057,0,0,0,0.239624855491583,0,0,0.144781306667579,0.410952645100767,0.358121926479791,0.672510863961164,0.788123040807709,2.37190332345469,1.54011643535698,0,0,3.09315525111078,0.502548796003046,0.637938751653163,0,0,0.414415513436035,0,0.500170521059677,0,1.66376689224646,1.96271887676878,0.788512075169673,0.585707074963566,0.300946099727719,9.09630016223939,0,0,1.29058417979192,0.260650843404249,0,0.343143423810856,0.206768026122887,2.15714200818617,0.426910231213777,0,1.66435439510497,0.907170879989041,4.46594054073798,2.91577749247319,26.3820488767089,4.86928767171664,5.11707249066703,2.57366273829772,2.96836132889982,0,0.177561725313127,0,0,0,1.93375119346596,1.40354529212299,0.276242966807689,1.03333003348146,0.182091168006717,1.70461739447251,0,0.231046011313244,0,0,0.527758144464379,0,0.340187410553031,0,0,0,0,0,0,0,1.31555925987561,1.5686127061494,0.769350375349168,0.984043937099117,0.976135183992909,0.103041011647722,0.54941678891006,0.330037999682352,0,0,1.6068392984416,0.096670718292122,0,0,0.137836572484531,0.322260734604821,0,0,0.534192213880424,0,0.576570202095319,0.127612712494584,0.10115778085555,0.929691098594572,0.31481234683064,0,0,0,0,0,0.858749320451947,0,0,0.190630193923825,1.02359116524534,0,0,0,0.719489830333259,4.94166653524899,0.706874414074119,0.202182481573316,0,0,0,0,0,0.545999645631943,1.1312434556297,2.26016233240486,0,1.32687795048244,2.63070531152258,0,0,0,0.30982349809975,0,0,0,0,0,1.68886108238131,0.987884678879706,0,0,0.0962221127255121,0,0,0.188287601553558,0.43050537267123,3.36942951335251,0.886860307073351,0.689170200620878,2.02979043692868,1.52927441428475,2.84823593587081,1.19115887728894,0.411362273086194,0.648473311192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|phase1_expression=4.1786027232228,21.6241529129893,4.79244973926302,26.0190575718139,15.6436383049551,12.2127393374052,5.06599756336621,0.631719873426831,0.261185628199839,0.491467873003018,0.697801167972428,0,0.791300934685361,0,0,0.672325146451775,1.20538905604795,0,0,0.246242116153576,0.408001382488506,0.626909442956176,0.572471974262113,0.547497700291537,0.502170558379211,0.993374274723366,0.738905305049512,0.550975469195755,0.786728553697808,0.767658796194425,0,0,0,0,0,0,0,0,0.401088894940283,0.217010870715852,0,0,0.257575567634187,0.145398238779565,0.377875943688809,0.242584061187816,0,0,0.309706370895104,0,0,0,0.344745680736619,0,0,0,0,0,0,0,0,0,0,0,0,0.56738522469114,0.622822248995575,0,0,0.217188844705117,1.21079900526674,0,0.316462387440884,0,0.212604299965044,0,0,0,0,0,0,0,1.75996244461323,6.00752472388345,1.77901850772711,1.28019066769952,4.40435585739614,4.02326707968138,5.2883589822789,1.90810750907073,0.569212969109448,0.587237189370939,1.91136614062614,0,0,0,0.196709770113833,1.96505381374582,1.43921049299656,1.5046784585161,1.62961133316795,2.8406868344084,5.84480185223734,1.11410456885174,2.65145316727353,2.21533894583621,3.24964636518019,1.66518715643378,0.910415432919148,2.13769275984779,2.21080014228679,1.73881851441031,3.41059095272739,5.35081656179426,7.31748666634838,0.906474741580529,2.68254345521345,1.71813722741315,1.51811815211702,4.14135038621326,0,1.90090408889675,2.86092726247768,2.17577238962511,6.24653632761729,1.89421801635213,0.821127996921047,0.201606743224732,1.87208137048455,1.59306844271079,0,0,0.255725123687061,0.361439152384566,0.50133791063589,2.60723734129483,0,4.37971383272372,0.283604451492204,1.33037638477538,0.87834785693126,0.523916301990851,0,0.370784442784429,0,0,0,0.715471872916026,0.571994910780128,0,0,0,0,0,0.419499436209906,0,0,0,0,0.33472061276467,0.402829317109147,0.760272105718513,0.24406205754817,0,0,0,0.22452937262617,0,0,0,0,0,0,0,0.496971951695318,1.13967460498122,0,1.43418310374407,1.41867352879343,2.80338800071154,1.06748995729705,0.98667019366864,0,0.134710672069688,0,0,0.576175924479999,0,0,0,0,0.352303495931295,0.161872944368132,0.140450806702248,0,0.122834317311768,0,0,0.741800787835671,0,0,0,0,0,0,1.83892677479412,0.600952235626387,0.113432183160021,0.89694817844431,3.41691822109708,0.847727604638247,2.10063767259082,2.37020817248409,3.86460810068444,4.28068769562657,0.843881661206331,3.11798416515836,1.7670364197088,3.49789614840738,0.161646056818812,2.4850671476163,3.82857973265033,1.52604533079439,0.193260853163297,0,0,0.609868530647977,0.927708378250397,1.97529702878181,0.725627385107593,1.51392510525377,0.36497735907583,0,3.21620469096443,0,2.3218396401599,2.16563844500876,0,0.168584690078102,0.241011029883482,0,0.217879444092406,0,0,0,0,1.4763109092493,1.40241773803446,0,0,0,0,0.590789906681404,0.882926198829301,1.22988438543114,0.343135620597051,0.109750285408626,0,0,0.185176890317059,0,0,1.44331342025273,0.231860809950154,0.117408694235822,0.288732895522148,0,0.570762456703795,0,0,0,0,0,0,0,0,0,0,0,0.985326475791887,0.528290604079356,0,0.144119953416961,0.12624243342638,0.063497894292169,0,0,0,0.411309970813294,0,0.857479297891735,0,0,0,0,0,0,3.45719551560332,12.4808924293639,0,0,0,0.285955987316295,0,0,0,0.710783897485092,0,0.301439377059586,0.871533458600294,0.099972991182057,0,0,0,0.239624855491583,0,0,0.144781306667579,0.410952645100767,0.358121926479791,0.672510863961164,0.788123040807709,2.37190332345469,1.54011643535698,0,0,3.09315525111078,0.502548796003046,0.637938751653163,0,0,0.414415513436035,0,0.500170521059677,0,1.66376689224646,1.96271887676878,0.788512075169673,0.585707074963566,0.300946099727719,9.09630016223939,0,0,1.29058417979192,0.260650843404249,0,0.343143423810856,0.206768026122887,2.15714200818617,0.426910231213777,0,1.66435439510497,0.907170879989041,4.46594054073798,2.91577749247319,26.3820488767089,4.86928767171664,5.11707249066703,2.57366273829772,2.96836132889982,0,0.177561725313127,0,0,0,1.93375119346596,1.40354529212299,0.276242966807689,1.03333003348146,0.182091168006717,1.70461739447251,0,0.231046011313244,0,0,0.527758144464379,0,0.340187410553031,0,0,0,0,0,0,0,1.31555925987561,1.5686127061494,0.769350375349168,0.984043937099117,0.976135183992909,0.103041011647722,0.54941678891006,0.330037999682352,0,0,1.6068392984416,0.096670718292122,0,0,0.137836572484531,0.322260734604821,0,0,0.534192213880424,0,0.576570202095319,0.127612712494584,0.10115778085555,0.929691098594572,0.31481234683064,0,0,0,0,0,0.858749320451947,0,0,0.190630193923825,1.02359116524534,0,0,0,0.719489830333259,4.94166653524899,0.706874414074119,0.202182481573316,0,0,0,0,0,0.545999645631943,1.1312434556297,2.26016233240486,0,1.32687795048244,2.63070531152258,0,0,0,0.30982349809975,0,0,0,0,0,1.68886108238131,0.987884678879706,0,0,0.0962221127255121,0,0,0.188287601553558,0.43050537267123,3.36942951335251,0.886860307073351,0.689170200620878,2.02979043692868,1.52927441428475,2.84823593587081,1.19115887728894,0.411362273086194,0.648473311192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| ||
|short_description=p5@LBH | |||
}} | }} |
Latest revision as of 21:52, 16 September 2015
Short description: | p5@LBH |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_LBH_5end |
Coexpression cluster: | C4220_Adipocyte_Preadipocyte_normal_Mesenchymal_tenocyte_penis_Osteoblast |
Association with transcript: | 169bp_to_ENST00000404397, ENST00000406087, ENST00000464412_5end |
EntrezGene: | LBH |
HGNC: | 29532 |
UniProt: | B5MC28B5MCM2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 7.57e-09 | 18 |
alpha-beta T cell | 7.57e-09 | 18 |
immature T cell | 7.57e-09 | 18 |
mature T cell | 7.57e-09 | 18 |
immature alpha-beta T cell | 7.57e-09 | 18 |
lymphoid lineage restricted progenitor cell | 7.74e-09 | 52 |
lymphocyte | 1.55e-08 | 53 |
common lymphoid progenitor | 1.55e-08 | 53 |
B cell | 4.06e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
omentum | 3.79e-09 | 6 |
peritoneum | 3.79e-09 | 6 |
abdominal cavity | 3.79e-09 | 6 |
visceral peritoneum | 3.79e-09 | 6 |