FFCP PHASE1:Hg19::chr2:29341037..29341054,+: Difference between revisions
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|id=chr2:29341037..29341054,+
|short_description=p13@CLIP4
|description=CAGE_peak_13_at_CLIP4_5end
|association_with_transcript=-6bp_to_ENST00000449202_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=79745 | |EntrezGene=79745 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26108 | |HGNC=26108 | ||
|TSSclassifier=strong | |||
|UniProt=E7EW06 | |UniProt=E7EW06 | ||
|association_with_transcript=-6bp_to_ENST00000449202_5end | |||
|cluster_id=chr2:29341037..29341054,+ | |||
|coexpression_cluster_id=C4218 | |||
|description=CAGE_peak_13_at_CLIP4_5end | |||
|id=chr2:29341037..29341054,+ | |||
|ontology_enrichment_celltype=CL:0000066!3.55e-29!254;CL:0000077!6.78e-16!19;CL:0000076!8.24e-12!62;CL:0000220!9.18e-10!246;CL:0002321!1.52e-09!248;CL:0002076!1.82e-09!43;CL:0000223!2.49e-09!59 | |||
|ontology_enrichment_celltype_v019=CL:0002621;1.59e-11;3!CL:0000313;2.88e-09;1!CL:0000306;7.28e-09;4!CL:0002222;7.28e-09;4!CL:0002224;7.28e-09;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.12e-11,253;CL:0002621,2.71e-11,3;CL:0000313,2.35e-09,1;CL:0000306,6.73e-09,4;CL:0002222,6.73e-09,4;CL:0002224,6.73e-09,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!8.44e-17!106;DOID:0050687!9.05e-15!143;DOID:14566!1.04e-12!239;DOID:162!5.28e-12!235;DOID:299!9.50e-09!25 | |||
|ontology_enrichment_disease_v019=DOID:2152;2.88e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.28e-10,106;DOID:2152,2.35e-09,1;DOID:0050687,1.37e-08,143 | |||
|ontology_enrichment_uberon=UBERON:0005911!2.35e-08!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0001949;1.59e-11;3!UBERON:0004911;2.88e-09;1!UBERON:0004807;4.66e-09;22!UBERON:0010077;7.28e-09;4!UBERON:0005389;7.28e-09;4!UBERON:0000484;7.28e-09;4!UBERON:0000965;7.28e-09;4!UBERON:0001803;7.28e-09;4!UBERON:0005911;3.36e-07;36 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001949,2.71e-11,3;UBERON:0004911,2.35e-09,1;UBERON:0010077,6.73e-09,4;UBERON:0005389,6.73e-09,4;UBERON:0000484,6.73e-09,4;UBERON:0002546,6.73e-09,4;UBERON:0000965,6.73e-09,4;UBERON:0001803,6.73e-09,4;UBERON:0003073,6.73e-09,4;UBERON:0005426,6.73e-09,4;UBERON:0004807,5.29e-07,28 | |||
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| ||
|short_description=p13@CLIP4 | |||
}} | }} |
Latest revision as of 20:38, 16 September 2015
Short description: | p13@CLIP4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_CLIP4_5end |
Coexpression cluster: | C4218_giant_transitionalcell_clear_large_squamous_mesothelioma_serous |
Association with transcript: | -6bp_to_ENST00000449202_5end |
EntrezGene: | CLIP4 |
HGNC: | 26108 |
UniProt: | E7EW06 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.12e-11 | 253 |
gingival epithelial cell | 2.71e-11 | 3 |
serous secreting cell | 2.35e-09 | 1 |
crystallin accumulating cell | 6.73e-09 | 4 |
vertebrate lens cell | 6.73e-09 | 4 |
lens epithelial cell | 6.73e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
gingival epithelium | 2.71e-11 | 3 |
epithelium of female gonad | 2.35e-09 | 1 |
cuboidal epithelium | 6.73e-09 | 4 |
transparent eye structure | 6.73e-09 | 4 |
simple cuboidal epithelium | 6.73e-09 | 4 |
cranial placode | 6.73e-09 | 4 |
lens of camera-type eye | 6.73e-09 | 4 |
epithelium of lens | 6.73e-09 | 4 |
lens placode | 6.73e-09 | 4 |
lens vesicle | 6.73e-09 | 4 |
respiratory system epithelium | 5.29e-07 | 28 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.28e-10 | 106 |
ovary epithelial cancer | 2.35e-09 | 1 |
cell type cancer | 1.37e-08 | 143 |