FFCP PHASE1:Mm9::chr4:66065492..66065543,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=56079 | |EntrezGene=56079 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=281 | |MCL_coexpression_id=281 | ||
|TSSclassifier=NA | |||
|UniProt=Q8BRX1,E9Q8T4,Q80Z10 | |UniProt=Q8BRX1,E9Q8T4,Q80Z10 | ||
|association_with_transcript=0bp_to_ENSMUST00000030064,ENSMUST00000084496,NM_019514,NM_207109,uc008thn.1,uc008tho.1,uc008thp.1,uc008ths.1,uc008tht.1,uc008thu.1_5end | |association_with_transcript=0bp_to_ENSMUST00000030064,ENSMUST00000084496,NM_019514,NM_207109,uc008thn.1,uc008tho.1,uc008thp.1,uc008ths.1,uc008tht.1,uc008thu.1_5end | ||
|cluster_id=chr4:66065492..66065543,- | |||
|description=CAGE_peak_1_at_Astn2_5end | |description=CAGE_peak_1_at_Astn2_5end | ||
|id=chr4:66065492..66065543,- | |id=chr4:66065492..66065543,- | ||
|ontology_enrichment_celltype=CL:0000221!2.11e-15!44;CL:0000133!2.11e-15!44;CL:0002319!5.02e-15!43;CL:0000540!4.84e-13!33;CL:0000047!4.84e-13!33;CL:0000031!4.84e-13!33;CL:0000404!4.84e-13!33;CL:0000055!6.41e-13!50;CL:0000393!1.22e-10!39;CL:0000211!1.22e-10!39;CL:0000117!9.41e-08!23;CL:0000337!9.41e-08!23;CL:0000107!4.71e-07!9 | |ontology_enrichment_celltype=CL:0000221!2.11e-15!44;CL:0000133!2.11e-15!44;CL:0002319!5.02e-15!43;CL:0000540!4.84e-13!33;CL:0000047!4.84e-13!33;CL:0000031!4.84e-13!33;CL:0000404!4.84e-13!33;CL:0000055!6.41e-13!50;CL:0000393!1.22e-10!39;CL:0000211!1.22e-10!39;CL:0000117!9.41e-08!23;CL:0000337!9.41e-08!23;CL:0000107!4.71e-07!9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000221,1.40e-15,44;CL:0000133,1.40e-15,44;CL:0002319,3.36e-15,43;CL:0000540,3.44e-13,33;CL:0000047,3.44e-13,33;CL:0000031,3.44e-13,33;CL:0000404,3.44e-13,33;CL:0000393,1.14e-10,39;CL:0000211,1.14e-10,39;CL:0000117,7.82e-08,23;CL:0000337,7.82e-08,23;CL:0000107,4.00e-07,9 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.64e-30!75;UBERON:0001016!1.64e-30!75;UBERON:0001017!5.02e-30!73;UBERON:0005743!5.02e-30!73;UBERON:0004121!2.30e-27!102;UBERON:0000924!2.30e-27!102;UBERON:0006601!2.30e-27!102;UBERON:0002346!2.14e-21!71;UBERON:0003075!2.14e-21!71;UBERON:0007284!2.14e-21!71;UBERON:0001049!1.11e-18!52;UBERON:0005068!1.11e-18!52;UBERON:0006241!1.11e-18!52;UBERON:0007135!1.11e-18!52;UBERON:0000033!1.66e-18!63;UBERON:0000955!1.13e-17!50;UBERON:0006238!1.13e-17!50;UBERON:0002616!4.76e-17!49;UBERON:0003056!5.09e-14!49;UBERON:0002020!4.10e-13!34;UBERON:0003080!8.04e-13!40;UBERON:0002780!2.82e-12!39;UBERON:0001890!2.82e-12!39;UBERON:0006240!2.82e-12!39;UBERON:0000468!5.85e-11!333;UBERON:0002791!1.79e-10!29;UBERON:0003528!1.79e-10!29;UBERON:0001893!1.79e-10!29;UBERON:0000025!3.91e-10!114;UBERON:0004111!1.48e-09!122;UBERON:0000153!3.01e-09!94;UBERON:0007811!2.57e-08!86;UBERON:0000922!3.71e-08!328;UBERON:0002619!6.54e-08!17;UBERON:0002021!1.35e-07!10;UBERON:0000411!1.35e-07!10;UBERON:0001950!1.35e-07!10;UBERON:0000010!3.58e-07!11;UBERON:0002410!4.71e-07!9;UBERON:0000956!5.30e-07!21;UBERON:0001869!5.30e-07!21;UBERON:0000203!5.30e-07!21;UBERON:0000479!6.97e-07!349;UBERON:0003076!7.86e-07!12;UBERON:0003057!7.86e-07!12 | |ontology_enrichment_uberon=UBERON:0000073!1.64e-30!75;UBERON:0001016!1.64e-30!75;UBERON:0001017!5.02e-30!73;UBERON:0005743!5.02e-30!73;UBERON:0004121!2.30e-27!102;UBERON:0000924!2.30e-27!102;UBERON:0006601!2.30e-27!102;UBERON:0002346!2.14e-21!71;UBERON:0003075!2.14e-21!71;UBERON:0007284!2.14e-21!71;UBERON:0001049!1.11e-18!52;UBERON:0005068!1.11e-18!52;UBERON:0006241!1.11e-18!52;UBERON:0007135!1.11e-18!52;UBERON:0000033!1.66e-18!63;UBERON:0000955!1.13e-17!50;UBERON:0006238!1.13e-17!50;UBERON:0002616!4.76e-17!49;UBERON:0003056!5.09e-14!49;UBERON:0002020!4.10e-13!34;UBERON:0003080!8.04e-13!40;UBERON:0002780!2.82e-12!39;UBERON:0001890!2.82e-12!39;UBERON:0006240!2.82e-12!39;UBERON:0000468!5.85e-11!333;UBERON:0002791!1.79e-10!29;UBERON:0003528!1.79e-10!29;UBERON:0001893!1.79e-10!29;UBERON:0000025!3.91e-10!114;UBERON:0004111!1.48e-09!122;UBERON:0000153!3.01e-09!94;UBERON:0007811!2.57e-08!86;UBERON:0000922!3.71e-08!328;UBERON:0002619!6.54e-08!17;UBERON:0002021!1.35e-07!10;UBERON:0000411!1.35e-07!10;UBERON:0001950!1.35e-07!10;UBERON:0000010!3.58e-07!11;UBERON:0002410!4.71e-07!9;UBERON:0000956!5.30e-07!21;UBERON:0001869!5.30e-07!21;UBERON:0000203!5.30e-07!21;UBERON:0000479!6.97e-07!349;UBERON:0003076!7.86e-07!12;UBERON:0003057!7.86e-07!12 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,6.89e-31,75;UBERON:0001017,2.14e-30,73;UBERON:0004121,2.23e-27,95;UBERON:0000924,2.23e-27,95;UBERON:0006601,2.23e-27,95;UBERON:0002346,4.00e-22,64;UBERON:0003075,4.00e-22,64;UBERON:0007284,4.00e-22,64;UBERON:0000073,3.85e-20,54;UBERON:0001049,6.64e-19,52;UBERON:0005068,6.64e-19,52;UBERON:0006241,6.64e-19,52;UBERON:0007135,6.64e-19,52;UBERON:0010371,8.38e-19,73;UBERON:0010314,1.10e-16,92;UBERON:0000955,3.12e-16,47;UBERON:0006238,3.12e-16,47;UBERON:0002616,1.29e-15,46;UBERON:0003056,3.52e-14,49;UBERON:0002020,2.91e-13,34;UBERON:0003080,5.75e-13,40;UBERON:0002780,2.05e-12,39;UBERON:0001890,2.05e-12,39;UBERON:0006240,2.05e-12,39;UBERON:0003528,1.38e-10,29;UBERON:0002791,1.38e-10,29;UBERON:0001893,1.38e-10,29;UBERON:0000025,2.88e-09,114;UBERON:0004111,8.95e-09,122;UBERON:0002619,5.42e-08,17;UBERON:0002021,1.13e-07,10;UBERON:0000411,1.13e-07,10;UBERON:0001950,1.13e-07,10;UBERON:0000010,3.03e-07,11;UBERON:0002410,4.00e-07,9;UBERON:0000956,4.50e-07,21;UBERON:0001869,4.50e-07,21;UBERON:0000203,4.50e-07,21;UBERON:0000922,5.55e-07,320;UBERON:0003076,6.72e-07,12;UBERON:0003057,6.72e-07,12 | |||
|phase1_expression=7.52699581392532,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,1.21485160433896,0,0,0,0,17.6039610612714,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.418531630736908,0.7813353445238,0.523523743973798,0,3.41522742479223,0,7.30201544258348,5.77848507951233,4.40512205188036,10.1710874765245,12.6454590700659,15.378032791413,22.3594383935426,5.5994568650145,7.18762821824858,0,0,0,0.257259436035947,1.14613375975503,2.57836046138721,41.4748744762175,42.3192783417626,50.7065122804943,1.35537812827653,3.55717918444456,0.449949858640699,0.988866362566974,0,27.8628102782116,21.9004434033286,3.62913643079672,2.97013064329719,2.10324961351382,40.8480907697439,40.4189429941453,5.38959516545798,3.92966431174769,10.1114066527102,61.6648933596577,34.4755812830007,27.6491759861238,42.863043512313,31.1972864684217,21.8783615633839,35.177057874174,38.8306200921859,37.1299742097649,61.8720029494702,41.8572741549363,32.8063024652529,7.34544075331885,23.7294698735307,6.08715426273523,10.3250865237766,0,0,1.29955283489534,0.448026887097336,2.80888840263504,0,0,0,19.5772353489586,0,0,0,0.216491041011214,0.253359865475099,0.505524445014783,2.74041311325744,1.03575153458869,4.30482203287992,17.1750473498474,10.6562917409249,7.84092690670599,5.87818298155228,6.23220147819235,1.50799909595611,1.23597483867187,3.90418263683761,0.884610551949874,6.79420769779119,1.10420759230197,0.969750506270444,0,241.544157534526,288.408115282128,1.02182822083437,0,0,0,43.4392854273986,26.0775343606617,17.9685723521396,41.1963638855695,49.6087987220841,33.2460871295296,35.5308366118389,5.19380755636613,2.11491850037158,0.758168275301024,5.6819301089348,8.32770834961304,5.51765050640335,5.40186389416048,11.0014517020072,19.5264752564311,19.8576266441517,21.082888025939,14.7460921321239,2.15567992932842,13.8047438522508,16.7153567955751,15.3437012699302,26.970583174883,12.537077994798,8.84863186554157,10.3497818745616,0,0,0,0.828503090142008,2.11073453982987,2.34080679899319,4.97163944728941,5.3126342571799,6.94202007993202,6.27841650826101,5.09719462659276,5.60473643362414,6.58239399653922,6.07419617092652,2.51313309592153,2.48539978623065,3.29325172936576,1.8788898626452,20.8187049078486,14.5095503454791,0.330418782983798,1.32225283331772,8.10495352033889,12.5407802804637,6.44337306610467,9.07575860805041,6.89371935919098,6.65789691393957,0.949058123089023,2.9645811850322,4.52403375840485,4.97391180102877,4.48417400373976,2.69645822596266,1.51296634912286,1.99141273254367,6.2590407314517,7.76889885746156,4.50830942692322,3.46207257337034,2.71533482034676,3.99774173374816,4.86921335856781,2.65698266363284,2.98297582898612,3.20832626196681,1.77871576252289,0.500535317148282,0.982794975566015,0.449724224769707,0.811440485554012,0.72353147925725,1.78238096246994,0.863088412352432,1.62135226775035,0.823684239564244,1.43768206527355,3.72140947668503,3.43241440426017,4.04126204715379,1.79397413521912,3.85954817090694,16.6277871149944,6.44270800019648,8.31121379854332,13.7493519477902,13.1426539041561,14.0705256251125,17.853273066451,13.2690880543303,29.7930422360701,34.7699562748577,28.3829488210327,20.8106409688987,23.8305274974936,12.5844680965915,0,0,0.491764273019036,0.275936746304732,32.2706685875462,30.7094618871572,0,3.53459298086122,43.2246260600272,43.3387006169269,62.0419385470461,43.731290025317,62.8292260912351,92.5660255679482,59.5071731462095,53.4828219977701,62.8507566934972,52.3753745767545,4.5420827266646,6.94455854302295,9.44744364250741,20.1263550026493,1.32745138339963,5.58395463156457,2.72091201268276,1.69744571780308,3.2483208216885,1.84461088766356,2.84271122485043,4.36240475373007,2.85197902707777,3.79244109522979,2.10837217149998,4.12542172992747,3.06395645178409,12.0640933000978,7.89087971074802,11.3598628566744,9.04435191575595,15.3397183137781,16.6194510808142,14.3098526083862,0,0,1.7642271844397,0.32977250588296,6.29711264114032,4.1012788951146,2.74556391207214,3.28281799490123,2.91480836629851,24.1052892613663,3.07567585436135,9.08102219038179,9.25972636848558,3.39063222608444,4.51090951479383,6.40578884978263,0,0,0.138199973804424,1.90934123603023,5.06137589729817,8.13277868507395,6.69633113095168,7.73626695253534,3.71216358368502,5.39457385539283,5.86839535649885,2.87931536182433,1.68499465279331,2.4853572523477,0,2.54178128274764,1.98550188548517,1.94451188344048,1.80823752868824,2.19642963138012,1.40828686374905,2.21347454234715,0.524296722128554,0,0.288030006257865,1.26404448251271,10.7444364103787,11.0927833738013,6.10627867995637,3.93858730468459,3.17890167650024,3.12508168751919,1.77227432609493,1.41353029927407,0.838274873204998,0.907435666231565,0.194915761479505,0.769694733122636,0.584384510907845,3.17422537061296,0,0,0,6.18206700903009,2.43987218086537,6.59345847362154,4.71610433973945,0,53.6514250486213,47.8738245967464,52.1334917229851,73.5531620430983,58.9170967002752,57.4099362016172,55.3518450190081,57.190792809476,50.7519498062309,51.776031175182,1.764384908931,10.7736715818278,16.2196925466427,13.8570828728928,3.35381060204772,3.8607136774503,8.00088220085815,12.5681384915725,9.30665707816264,11.8767689528985,9.12525479604863,12.8265912142532,10.2069243142172,11.0123262136375,10.5106908188772,17.1465728861907,14.3696564171621,12.7320085506045,9.89006161927936,11.6287146906174,8.22886205724997,7.80893547101085,12.8755542571553,12.2090989971156,11.0107975085937,14.63832716526,10.2439664808753,11.8381370147029,9.2346797415186,15.7119836064167,11.1516917036724,11.1310065084387,9.41231399290286,7.90177890048427,9.45242393807593,23.7320049041049,10.5269223800434,9.45432637812513,11.4772999241306,7.27951683094401,4.40548887678801 | |phase1_expression=7.52699581392532,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,1.21485160433896,0,0,0,0,17.6039610612714,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.418531630736908,0.7813353445238,0.523523743973798,0,3.41522742479223,0,7.30201544258348,5.77848507951233,4.40512205188036,10.1710874765245,12.6454590700659,15.378032791413,22.3594383935426,5.5994568650145,7.18762821824858,0,0,0,0.257259436035947,1.14613375975503,2.57836046138721,41.4748744762175,42.3192783417626,50.7065122804943,1.35537812827653,3.55717918444456,0.449949858640699,0.988866362566974,0,27.8628102782116,21.9004434033286,3.62913643079672,2.97013064329719,2.10324961351382,40.8480907697439,40.4189429941453,5.38959516545798,3.92966431174769,10.1114066527102,61.6648933596577,34.4755812830007,27.6491759861238,42.863043512313,31.1972864684217,21.8783615633839,35.177057874174,38.8306200921859,37.1299742097649,61.8720029494702,41.8572741549363,32.8063024652529,7.34544075331885,23.7294698735307,6.08715426273523,10.3250865237766,0,0,1.29955283489534,0.448026887097336,2.80888840263504,0,0,0,19.5772353489586,0,0,0,0.216491041011214,0.253359865475099,0.505524445014783,2.74041311325744,1.03575153458869,4.30482203287992,17.1750473498474,10.6562917409249,7.84092690670599,5.87818298155228,6.23220147819235,1.50799909595611,1.23597483867187,3.90418263683761,0.884610551949874,6.79420769779119,1.10420759230197,0.969750506270444,0,241.544157534526,288.408115282128,1.02182822083437,0,0,0,43.4392854273986,26.0775343606617,17.9685723521396,41.1963638855695,49.6087987220841,33.2460871295296,35.5308366118389,5.19380755636613,2.11491850037158,0.758168275301024,5.6819301089348,8.32770834961304,5.51765050640335,5.40186389416048,11.0014517020072,19.5264752564311,19.8576266441517,21.082888025939,14.7460921321239,2.15567992932842,13.8047438522508,16.7153567955751,15.3437012699302,26.970583174883,12.537077994798,8.84863186554157,10.3497818745616,0,0,0,0.828503090142008,2.11073453982987,2.34080679899319,4.97163944728941,5.3126342571799,6.94202007993202,6.27841650826101,5.09719462659276,5.60473643362414,6.58239399653922,6.07419617092652,2.51313309592153,2.48539978623065,3.29325172936576,1.8788898626452,20.8187049078486,14.5095503454791,0.330418782983798,1.32225283331772,8.10495352033889,12.5407802804637,6.44337306610467,9.07575860805041,6.89371935919098,6.65789691393957,0.949058123089023,2.9645811850322,4.52403375840485,4.97391180102877,4.48417400373976,2.69645822596266,1.51296634912286,1.99141273254367,6.2590407314517,7.76889885746156,4.50830942692322,3.46207257337034,2.71533482034676,3.99774173374816,4.86921335856781,2.65698266363284,2.98297582898612,3.20832626196681,1.77871576252289,0.500535317148282,0.982794975566015,0.449724224769707,0.811440485554012,0.72353147925725,1.78238096246994,0.863088412352432,1.62135226775035,0.823684239564244,1.43768206527355,3.72140947668503,3.43241440426017,4.04126204715379,1.79397413521912,3.85954817090694,16.6277871149944,6.44270800019648,8.31121379854332,13.7493519477902,13.1426539041561,14.0705256251125,17.853273066451,13.2690880543303,29.7930422360701,34.7699562748577,28.3829488210327,20.8106409688987,23.8305274974936,12.5844680965915,0,0,0.491764273019036,0.275936746304732,32.2706685875462,30.7094618871572,0,3.53459298086122,43.2246260600272,43.3387006169269,62.0419385470461,43.731290025317,62.8292260912351,92.5660255679482,59.5071731462095,53.4828219977701,62.8507566934972,52.3753745767545,4.5420827266646,6.94455854302295,9.44744364250741,20.1263550026493,1.32745138339963,5.58395463156457,2.72091201268276,1.69744571780308,3.2483208216885,1.84461088766356,2.84271122485043,4.36240475373007,2.85197902707777,3.79244109522979,2.10837217149998,4.12542172992747,3.06395645178409,12.0640933000978,7.89087971074802,11.3598628566744,9.04435191575595,15.3397183137781,16.6194510808142,14.3098526083862,0,0,1.7642271844397,0.32977250588296,6.29711264114032,4.1012788951146,2.74556391207214,3.28281799490123,2.91480836629851,24.1052892613663,3.07567585436135,9.08102219038179,9.25972636848558,3.39063222608444,4.51090951479383,6.40578884978263,0,0,0.138199973804424,1.90934123603023,5.06137589729817,8.13277868507395,6.69633113095168,7.73626695253534,3.71216358368502,5.39457385539283,5.86839535649885,2.87931536182433,1.68499465279331,2.4853572523477,0,2.54178128274764,1.98550188548517,1.94451188344048,1.80823752868824,2.19642963138012,1.40828686374905,2.21347454234715,0.524296722128554,0,0.288030006257865,1.26404448251271,10.7444364103787,11.0927833738013,6.10627867995637,3.93858730468459,3.17890167650024,3.12508168751919,1.77227432609493,1.41353029927407,0.838274873204998,0.907435666231565,0.194915761479505,0.769694733122636,0.584384510907845,3.17422537061296,0,0,0,6.18206700903009,2.43987218086537,6.59345847362154,4.71610433973945,0,53.6514250486213,47.8738245967464,52.1334917229851,73.5531620430983,58.9170967002752,57.4099362016172,55.3518450190081,57.190792809476,50.7519498062309,51.776031175182,1.764384908931,10.7736715818278,16.2196925466427,13.8570828728928,3.35381060204772,3.8607136774503,8.00088220085815,12.5681384915725,9.30665707816264,11.8767689528985,9.12525479604863,12.8265912142532,10.2069243142172,11.0123262136375,10.5106908188772,17.1465728861907,14.3696564171621,12.7320085506045,9.89006161927936,11.6287146906174,8.22886205724997,7.80893547101085,12.8755542571553,12.2090989971156,11.0107975085937,14.63832716526,10.2439664808753,11.8381370147029,9.2346797415186,15.7119836064167,11.1516917036724,11.1310065084387,9.41231399290286,7.90177890048427,9.45242393807593,23.7320049041049,10.5269223800434,9.45432637812513,11.4772999241306,7.27951683094401,4.40548887678801 | ||
|short_description=p1@Astn2 | |short_description=p1@Astn2 | ||
}} | }} |
Latest revision as of 04:52, 27 September 2015
Short description: | p1@Astn2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Astn2_5end |
Coexpression cluster: | MCL_coexpression_mm9:281 |
Association with transcript: | 0bp_to_ENSMUST00000030064, ENSMUST00000084496, NM_019514, NM_207109, uc008thn.1, uc008tho.1, uc008thp.1, uc008ths.1, uc008tht.1, uc008thu.1_5end |
EntrezGene: | Astn2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 1.40e-15 | 44 |
neurectodermal cell | 1.40e-15 | 44 |
neural cell | 3.36e-15 | 43 |
neuron | 3.44e-13 | 33 |
neuronal stem cell | 3.44e-13 | 33 |
neuroblast | 3.44e-13 | 33 |
electrically signaling cell | 3.44e-13 | 33 |
electrically responsive cell | 1.14e-10 | 39 |
electrically active cell | 1.14e-10 | 39 |
CNS neuron (sensu Vertebrata) | 7.82e-08 | 23 |
neuroblast (sensu Vertebrata) | 7.82e-08 | 23 |
autonomic neuron | 4.00e-07 | 9 |