FFCP PHASE1:Mm9::chr4:12015059..12015158,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=329795 | |EntrezGene=329795 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=463 | |MCL_coexpression_id=463 | ||
|TSSclassifier=NA | |||
|UniProt=E9QNI1,D6RGQ2,Q8BR76,A2AJP5,Q8BT65 | |UniProt=E9QNI1,D6RGQ2,Q8BR76,A2AJP5,Q8BT65 | ||
|association_with_transcript=0bp_to_ENSMUST00000050686,ENSMUST00000131145,ENSMUST00000146140,ENSMUST00000147746,ENSMUST00000151859,NM_177861,uc008saf.2,uc008sag.2,uc008sah.1,uc008sai.1,uc008saj.1_5end | |association_with_transcript=0bp_to_ENSMUST00000050686,ENSMUST00000131145,ENSMUST00000146140,ENSMUST00000147746,ENSMUST00000151859,NM_177861,uc008saf.2,uc008sag.2,uc008sah.1,uc008sai.1,uc008saj.1_5end | ||
|cluster_id=chr4:12015059..12015158,- | |||
|description=CAGE_peak_1_at_Tmem67_5end | |description=CAGE_peak_1_at_Tmem67_5end | ||
|id=chr4:12015059..12015158,- | |id=chr4:12015059..12015158,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003056!3.72e-22!49;UBERON:0000033!7.20e-22!63;UBERON:0002346!1.44e-20!71;UBERON:0003075!1.44e-20!71;UBERON:0007284!1.44e-20!71;UBERON:0000955!5.63e-18!50;UBERON:0006238!5.63e-18!50;UBERON:0002616!2.19e-17!49;UBERON:0001049!2.58e-17!52;UBERON:0005068!2.58e-17!52;UBERON:0006241!2.58e-17!52;UBERON:0007135!2.58e-17!52;UBERON:0003080!2.61e-17!40;UBERON:0004121!5.04e-17!102;UBERON:0000924!5.04e-17!102;UBERON:0006601!5.04e-17!102;UBERON:0001017!5.58e-17!73;UBERON:0005743!5.58e-17!73;UBERON:0002780!1.06e-16!39;UBERON:0001890!1.06e-16!39;UBERON:0006240!1.06e-16!39;UBERON:0000073!4.42e-16!75;UBERON:0001016!4.42e-16!75;UBERON:0002791!3.26e-11!29;UBERON:0003528!3.26e-11!29;UBERON:0001893!3.26e-11!29;UBERON:0002020!4.26e-11!34;UBERON:0000153!2.06e-10!94;UBERON:0004111!3.93e-10!122;UBERON:0000025!6.38e-10!114;UBERON:0000468!6.88e-09!333;UBERON:0000956!7.66e-09!21;UBERON:0001869!7.66e-09!21;UBERON:0000203!7.66e-09!21;UBERON:0007811!1.59e-08!86;UBERON:0002619!9.05e-08!17;UBERON:0000922!2.25e-07!328;UBERON:0000475!6.98e-07!200 | |ontology_enrichment_uberon=UBERON:0003056!3.72e-22!49;UBERON:0000033!7.20e-22!63;UBERON:0002346!1.44e-20!71;UBERON:0003075!1.44e-20!71;UBERON:0007284!1.44e-20!71;UBERON:0000955!5.63e-18!50;UBERON:0006238!5.63e-18!50;UBERON:0002616!2.19e-17!49;UBERON:0001049!2.58e-17!52;UBERON:0005068!2.58e-17!52;UBERON:0006241!2.58e-17!52;UBERON:0007135!2.58e-17!52;UBERON:0003080!2.61e-17!40;UBERON:0004121!5.04e-17!102;UBERON:0000924!5.04e-17!102;UBERON:0006601!5.04e-17!102;UBERON:0001017!5.58e-17!73;UBERON:0005743!5.58e-17!73;UBERON:0002780!1.06e-16!39;UBERON:0001890!1.06e-16!39;UBERON:0006240!1.06e-16!39;UBERON:0000073!4.42e-16!75;UBERON:0001016!4.42e-16!75;UBERON:0002791!3.26e-11!29;UBERON:0003528!3.26e-11!29;UBERON:0001893!3.26e-11!29;UBERON:0002020!4.26e-11!34;UBERON:0000153!2.06e-10!94;UBERON:0004111!3.93e-10!122;UBERON:0000025!6.38e-10!114;UBERON:0000468!6.88e-09!333;UBERON:0000956!7.66e-09!21;UBERON:0001869!7.66e-09!21;UBERON:0000203!7.66e-09!21;UBERON:0007811!1.59e-08!86;UBERON:0002619!9.05e-08!17;UBERON:0000922!2.25e-07!328;UBERON:0000475!6.98e-07!200 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003056,3.70e-22,49;UBERON:0002346,9.56e-22,64;UBERON:0003075,9.56e-22,64;UBERON:0007284,9.56e-22,64;UBERON:0010371,1.20e-18,73;UBERON:0000955,9.57e-18,47;UBERON:0006238,9.57e-18,47;UBERON:0004121,1.96e-17,95;UBERON:0000924,1.96e-17,95;UBERON:0006601,1.96e-17,95;UBERON:0000073,2.16e-17,54;UBERON:0001049,2.57e-17,52;UBERON:0005068,2.57e-17,52;UBERON:0006241,2.57e-17,52;UBERON:0007135,2.57e-17,52;UBERON:0003080,2.61e-17,40;UBERON:0002616,3.73e-17,46;UBERON:0001017,5.56e-17,73;UBERON:0002780,1.06e-16,39;UBERON:0001890,1.06e-16,39;UBERON:0006240,1.06e-16,39;UBERON:0001016,4.41e-16,75;UBERON:0010314,2.83e-15,92;UBERON:0003528,3.25e-11,29;UBERON:0002791,3.25e-11,29;UBERON:0001893,3.25e-11,29;UBERON:0002020,4.25e-11,34;UBERON:0004111,4.02e-10,122;UBERON:0000025,6.53e-10,114;UBERON:0000956,7.65e-09,21;UBERON:0001869,7.65e-09,21;UBERON:0000203,7.65e-09,21;UBERON:0000922,7.58e-08,320;UBERON:0002619,9.04e-08,17 | |||
|phase1_expression=13.4525031568027,0.697950815278722,2.72999543633722,1.20985684522732,0.500895729946347,2.68606835059024,2.56973904655078,0.903863264091034,0.563154888606667,0,0.171217968225505,0.159544317990673,0.684802919724823,0.262261207256992,2.6648780945253,1.61980213911861,4.19737126876888,3.62781490161973,4.38766187538364,1.27316895539409,25.5129870453209,5.26242041364692,4.17919662622297,2.87986361028132,1.83527424853736,0.57423196411502,1.29228598847722,1.50829862880122,3.80046838912748,1.76421090831952,2.66076612786366,3.81018404075779,2.46025915033828,0,4.62162591602039,2.49351968037739,2.6542016314108,2.09265815368454,0.7813353445238,3.66466620781659,2.94115744015507,3.41522742479223,5.82612423637384,11.2048167998264,10.239070053171,9.17733760808408,7.82391344348039,4.79655344036982,6.81027166476863,13.8045228342741,7.41928034614421,5.75010257459886,3.52343472721246,1.45072428402269,0,5.65970759279083,7.44986943840768,5.15672092277442,12.7459370341547,17.4567023159771,10.1413024560989,4.06613438482959,2.66788438833342,0.449949858640699,0,4.2628806896766,3.59520132622086,7.68436610643109,13.3759599877936,10.3954572515402,11.1472229516232,6.28432165688368,6.18431914664518,12.1265891222804,11.3097655801519,18.3843757322004,8.8092704799511,13.7902325132003,9.06278546211836,15.9582408153535,16.0103376304217,18.7528813400434,4.74611098302348,12.380777420697,12.9878510610289,13.258286346315,11.9592211871246,11.9295645328192,3.86203585999239,6.65029728939713,10.4351215932604,4.30211938490693,0.679971333707751,3.77792234146472,7.79731700937203,6.72040330646003,7.3031098468511,7.49893419343454,5.19572009205738,2.82671659608272,9.99988280414432,2.56652954828636,2.54805239706646,7.11066703153331,3.24736561516821,3.29367825117628,2.52762222507392,5.709193985953,8.02707439306232,9.35185476108396,7.98032503124225,6.69824052286711,8.07154240396205,7.988299949289,9.28950786372068,6.91166252313215,12.8541383221874,6.50697106139602,4.42305275974937,4.85300549842228,1.76673214768315,5.33362778448744,9.31958806090611,14.9318206475889,9.63454851341893,3.83185582812887,1.91704199209472,1.79970819298022,3.04968544975355,18.1246673679835,13.7250180845588,21.2355855070741,18.9468509009581,15.3429274398198,13.0906468072523,15.8996437806402,11.1004906596845,8.33526703087623,15.1633655060205,10.5220927943237,15.8746940414499,20.2313851901456,15.1252189036493,17.0296444154358,17.6894897793452,18.7046031615881,17.2411173189901,23.2833033665114,12.7185115830377,17.3977593754394,15.4836989264275,11.6173738186615,11.3999372182495,10.0993128291428,12.9642745937004,10.5488161413801,3.51106593656617,1.28673953557358,2.84163499395593,7.45652781127807,7.73935997937617,7.38254451990161,7.33908680314152,5.1158700254325,6.01641740260775,7.44108623201305,6.43856163359086,6.53885917256149,4.11399624783701,7.88003827579657,5.43161023957233,5.70179950958796,5.48875288227627,7.64976586934119,17.0334858336943,20.4780178634776,3.96502539580558,3.43785736662608,14.2903127858607,12.5407802804637,8.24751752461397,8.87407508342707,5.33707305227689,6.65789691393957,4.2707615539006,2.79988223030818,5.7807098024062,7.16243299348143,5.8489226135736,0,5.83572734661674,5.97423819763102,10.0523987505133,13.8240700257772,16.9061603509621,13.4409876377907,12.6069116658957,11.0814595426703,12.8370170362242,11.3659813944294,11.9319033159445,10.2419646055094,4.15033677922008,4.17112764290235,2.75182593158484,3.82265591054251,3.44862206360455,3.61765739628625,2.5462585178142,5.17853047411459,4.53978634970099,5.76578967694971,2.87536413054709,4.83783231969054,6.86482880852033,7.57736633841335,5.20252499213545,4.82443521363367,18.1058126363273,11.3694847062291,11.2445833744998,11.8821560042632,13.6120344007331,14.7405506548798,14.9967493758189,8.58588050574315,12.9260818167077,13.730810758224,11.0023790373666,12.9452018625433,12.7786886580763,13.5970115066621,10.5553898757491,9.79030230873677,1.47529281905711,3.86311444826625,13.4862495589745,10.0802050469295,3.11476396215683,4.79694761688309,7.57219726599016,7.41833614163613,10.7711698866399,6.93009514062401,6.68396022247182,9.90767857760913,8.09621403349789,7.89090816360542,10.2774822266096,17.9939937196212,14.6198287764517,12.2865266530406,11.0763132360432,22.1059964783198,3.98235415019888,9.95400608235424,7.55808892411878,6.03536255218874,8.26845300066164,8.60818414242997,5.16856586336442,6.90714086007261,8.19943970284859,4.74055136903724,6.32511651449993,2.06271086496374,32.6822021523636,16.0254373687866,13.0652270620582,19.2903331528433,25.3596534108451,21.2258892946464,18.1003922662333,21.312546438022,8.91752490642099,7.20229040936989,8.82113592219848,5.27636009412736,7.75029248140347,6.03129249281559,7.28171298419132,6.07321329056727,5.24665505933731,11.3109434226411,3.41741761595705,7.42992724667601,7.77817014952789,3.57900068308913,2.7338845544205,3.88922894451088,4.07948231985253,4.3384950220334,3.04039942369732,2.86401185404534,9.96458379780576,10.775931757723,10.1525020372493,8.36353184057875,9.6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|phase1_expression=13.4525031568027,0.697950815278722,2.72999543633722,1.20985684522732,0.500895729946347,2.68606835059024,2.56973904655078,0.903863264091034,0.563154888606667,0,0.171217968225505,0.159544317990673,0.684802919724823,0.262261207256992,2.6648780945253,1.61980213911861,4.19737126876888,3.62781490161973,4.38766187538364,1.27316895539409,25.5129870453209,5.26242041364692,4.17919662622297,2.87986361028132,1.83527424853736,0.57423196411502,1.29228598847722,1.50829862880122,3.80046838912748,1.76421090831952,2.66076612786366,3.81018404075779,2.46025915033828,0,4.62162591602039,2.49351968037739,2.6542016314108,2.09265815368454,0.7813353445238,3.66466620781659,2.94115744015507,3.41522742479223,5.82612423637384,11.2048167998264,10.239070053171,9.17733760808408,7.82391344348039,4.79655344036982,6.81027166476863,13.8045228342741,7.41928034614421,5.75010257459886,3.52343472721246,1.45072428402269,0,5.65970759279083,7.44986943840768,5.15672092277442,12.7459370341547,17.4567023159771,10.1413024560989,4.06613438482959,2.66788438833342,0.449949858640699,0,4.2628806896766,3.59520132622086,7.68436610643109,13.3759599877936,10.3954572515402,11.1472229516232,6.28432165688368,6.18431914664518,12.1265891222804,11.3097655801519,18.3843757322004,8.8092704799511,13.7902325132003,9.06278546211836,15.9582408153535,16.0103376304217,18.7528813400434,4.74611098302348,12.380777420697,12.9878510610289,13.258286346315,11.9592211871246,11.9295645328192,3.86203585999239,6.65029728939713,10.4351215932604,4.30211938490693,0.679971333707751,3.77792234146472,7.79731700937203,6.72040330646003,7.3031098468511,7.49893419343454,5.19572009205738,2.82671659608272,9.99988280414432,2.56652954828636,2.54805239706646,7.11066703153331,3.24736561516821,3.29367825117628,2.52762222507392,5.709193985953,8.02707439306232,9.35185476108396,7.98032503124225,6.69824052286711,8.07154240396205,7.988299949289,9.28950786372068,6.91166252313215,12.8541383221874,6.50697106139602,4.42305275974937,4.85300549842228,1.76673214768315,5.33362778448744,9.31958806090611,14.9318206475889,9.63454851341893,3.83185582812887,1.91704199209472,1.79970819298022,3.04968544975355,18.1246673679835,13.7250180845588,21.2355855070741,18.9468509009581,15.3429274398198,13.0906468072523,15.8996437806402,11.1004906596845,8.33526703087623,15.1633655060205,10.5220927943237,15.8746940414499,20.2313851901456,15.1252189036493,17.0296444154358,17.6894897793452,18.7046031615881,17.2411173189901,23.2833033665114,12.7185115830377,17.3977593754394,15.4836989264275,11.6173738186615,11.3999372182495,10.0993128291428,12.9642745937004,10.5488161413801,3.51106593656617,1.28673953557358,2.84163499395593,7.45652781127807,7.73935997937617,7.38254451990161,7.33908680314152,5.1158700254325,6.01641740260775,7.44108623201305,6.43856163359086,6.53885917256149,4.11399624783701,7.88003827579657,5.43161023957233,5.70179950958796,5.48875288227627,7.64976586934119,17.0334858336943,20.4780178634776,3.96502539580558,3.43785736662608,14.2903127858607,12.5407802804637,8.24751752461397,8.87407508342707,5.33707305227689,6.65789691393957,4.2707615539006,2.79988223030818,5.7807098024062,7.16243299348143,5.8489226135736,0,5.83572734661674,5.97423819763102,10.0523987505133,13.8240700257772,16.9061603509621,13.4409876377907,12.6069116658957,11.0814595426703,12.8370170362242,11.3659813944294,11.9319033159445,10.2419646055094,4.15033677922008,4.17112764290235,2.75182593158484,3.82265591054251,3.44862206360455,3.61765739628625,2.5462585178142,5.17853047411459,4.53978634970099,5.76578967694971,2.87536413054709,4.83783231969054,6.86482880852033,7.57736633841335,5.20252499213545,4.82443521363367,18.1058126363273,11.3694847062291,11.2445833744998,11.8821560042632,13.6120344007331,14.7405506548798,14.9967493758189,8.58588050574315,12.9260818167077,13.730810758224,11.0023790373666,12.9452018625433,12.7786886580763,13.5970115066621,10.5553898757491,9.79030230873677,1.47529281905711,3.86311444826625,13.4862495589745,10.0802050469295,3.11476396215683,4.79694761688309,7.57219726599016,7.41833614163613,10.7711698866399,6.93009514062401,6.68396022247182,9.90767857760913,8.09621403349789,7.89090816360542,10.2774822266096,17.9939937196212,14.6198287764517,12.2865266530406,11.0763132360432,22.1059964783198,3.98235415019888,9.95400608235424,7.55808892411878,6.03536255218874,8.26845300066164,8.60818414242997,5.16856586336442,6.90714086007261,8.19943970284859,4.74055136903724,6.32511651449993,2.06271086496374,32.6822021523636,16.0254373687866,13.0652270620582,19.2903331528433,25.3596534108451,21.2258892946464,18.1003922662333,21.312546438022,8.91752490642099,7.20229040936989,8.82113592219848,5.27636009412736,7.75029248140347,6.03129249281559,7.28171298419132,6.07321329056727,5.24665505933731,11.3109434226411,3.41741761595705,7.42992724667601,7.77817014952789,3.57900068308913,2.7338845544205,3.88922894451088,4.07948231985253,4.3384950220334,3.04039942369732,2.86401185404534,9.96458379780576,10.775931757723,10.1525020372493,8.36353184057875,9.6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| ||
|short_description=p1@Tmem67 | |short_description=p1@Tmem67 | ||
}} | }} |
Latest revision as of 06:48, 26 September 2015
Short description: | p1@Tmem67 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Tmem67_5end |
Coexpression cluster: | MCL_coexpression_mm9:463 |
Association with transcript: | 0bp_to_ENSMUST00000050686, ENSMUST00000131145, ENSMUST00000146140, ENSMUST00000147746, ENSMUST00000151859, NM_177861, uc008saf.2, uc008sag.2, uc008sah.1, uc008sai.1, uc008saj.1_5end |
EntrezGene: | Tmem67 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pre-chordal neural plate | 3.70e-22 | 49 |
neurectoderm | 9.56e-22 | 64 |
neural plate | 9.56e-22 | 64 |
presumptive neural plate | 9.56e-22 | 64 |
ecto-epithelium | 1.20e-18 | 73 |
brain | 9.57e-18 | 47 |
future brain | 9.57e-18 | 47 |
ectoderm-derived structure | 1.96e-17 | 95 |
ectoderm | 1.96e-17 | 95 |
presumptive ectoderm | 1.96e-17 | 95 |
regional part of nervous system | 2.16e-17 | 54 |
neural tube | 2.57e-17 | 52 |
neural rod | 2.57e-17 | 52 |
future spinal cord | 2.57e-17 | 52 |
neural keel | 2.57e-17 | 52 |
anterior neural tube | 2.61e-17 | 40 |
regional part of brain | 3.73e-17 | 46 |
central nervous system | 5.56e-17 | 73 |
regional part of forebrain | 1.06e-16 | 39 |
forebrain | 1.06e-16 | 39 |
future forebrain | 1.06e-16 | 39 |
nervous system | 4.41e-16 | 75 |
structure with developmental contribution from neural crest | 2.83e-15 | 92 |
brain grey matter | 3.25e-11 | 29 |
regional part of telencephalon | 3.25e-11 | 29 |
telencephalon | 3.25e-11 | 29 |
gray matter | 4.25e-11 | 34 |
anatomical conduit | 4.02e-10 | 122 |
tube | 6.53e-10 | 114 |
cerebral cortex | 7.65e-09 | 21 |
cerebral hemisphere | 7.65e-09 | 21 |
pallium | 7.65e-09 | 21 |
embryo | 7.58e-08 | 320 |
regional part of cerebral cortex | 9.04e-08 | 17 |