FFCP PHASE1:Mm9::chr2:87685501..87685502,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1657 | |MCL_coexpression_id=1657 | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:87685501..87685502,+ | |||
|description=CAGE_peak_at_chr2:87685501..87685502,+ | |description=CAGE_peak_at_chr2:87685501..87685502,+ | ||
|id=chr2:87685501..87685502,+ | |id=chr2:87685501..87685502,+ | ||
|ontology_enrichment_celltype=CL:0000839!3.58e-18!13;CL:0002031!1.68e-16!25;CL:0000553!1.20e-15!6;CL:0000556!1.20e-15!6;CL:0000050!6.09e-15!9;CL:0000763!1.50e-14!16;CL:0000219!6.79e-13!54;CL:0000988!1.80e-12!32;CL:0002032!1.80e-12!32;CL:0000037!1.80e-12!32;CL:0000566!1.80e-12!32;CL:0000837!1.80e-12!32;CL:0000068!2.13e-12!3;CL:0002202!2.13e-12!3;CL:0000069!2.13e-12!3;CL:0002632!2.13e-12!3;CL:0002368!2.13e-12!3;CL:0000307!2.13e-12!3;CL:0000377!2.13e-12!3;CL:0000049!4.54e-12!19;CL:0000414!5.71e-12!11;CL:0000063!6.12e-12!66;CL:0002320!1.18e-11!46;CL:0000134!1.18e-11!46;CL:0000215!3.23e-11!3;CL:0000548!1.20e-09!115;CL:0000004!1.20e-09!115;CL:0000255!1.20e-09!115;CL:0002371!2.62e-09!118;CL:0000144!5.50e-09!121;CL:0000012!5.50e-09!121;CL:0000325!1.12e-07!2;CL:0000217!1.12e-07!2;CL:0000328!1.12e-07!2;CL:0002573!1.12e-07!2;CL:0002376!1.12e-07!2;CL:0000218!1.12e-07!2;CL:0000692!1.12e-07!2;CL:0002377!1.12e-07!2;CL:0002375!1.12e-07!2 | |ontology_enrichment_celltype=CL:0000839!3.58e-18!13;CL:0002031!1.68e-16!25;CL:0000553!1.20e-15!6;CL:0000556!1.20e-15!6;CL:0000050!6.09e-15!9;CL:0000763!1.50e-14!16;CL:0000219!6.79e-13!54;CL:0000988!1.80e-12!32;CL:0002032!1.80e-12!32;CL:0000037!1.80e-12!32;CL:0000566!1.80e-12!32;CL:0000837!1.80e-12!32;CL:0000068!2.13e-12!3;CL:0002202!2.13e-12!3;CL:0000069!2.13e-12!3;CL:0002632!2.13e-12!3;CL:0002368!2.13e-12!3;CL:0000307!2.13e-12!3;CL:0000377!2.13e-12!3;CL:0000049!4.54e-12!19;CL:0000414!5.71e-12!11;CL:0000063!6.12e-12!66;CL:0002320!1.18e-11!46;CL:0000134!1.18e-11!46;CL:0000215!3.23e-11!3;CL:0000548!1.20e-09!115;CL:0000004!1.20e-09!115;CL:0000255!1.20e-09!115;CL:0002371!2.62e-09!118;CL:0000144!5.50e-09!121;CL:0000012!5.50e-09!121;CL:0000325!1.12e-07!2;CL:0000217!1.12e-07!2;CL:0000328!1.12e-07!2;CL:0002573!1.12e-07!2;CL:0002376!1.12e-07!2;CL:0000218!1.12e-07!2;CL:0000692!1.12e-07!2;CL:0002377!1.12e-07!2;CL:0002375!1.12e-07!2 | ||
|ontology_enrichment_celltype_v019_2=CL:0002476,5.70e-26,2;CL:0000068,3.41e-17,3;CL:0002202,3.41e-17,3;CL:0000069,3.41e-17,3;CL:0002632,3.41e-17,3;CL:0002368,3.41e-17,3;CL:0000307,3.41e-17,3;CL:0000377,3.41e-17,3;CL:0000839,5.30e-16,13;CL:0002194,1.56e-13,4;CL:0000766,1.56e-13,4;CL:0000234,1.56e-13,4;CL:0000576,1.56e-13,4;CL:0000235,1.56e-13,4;CL:0000864,1.56e-13,4;CL:0002009,1.56e-13,4;CL:0000040,1.56e-13,4;CL:0000559,1.56e-13,4;CL:0000763,4.21e-13,16;CL:0000049,4.11e-11,19;CL:0002031,1.49e-08,25;CL:0000473,3.78e-08,7;CL:0000557,3.78e-08,7;CL:0000988,9.13e-07,32;CL:0002032,9.13e-07,32;CL:0000037,9.13e-07,32;CL:0000837,9.13e-07,32 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.01e-14!16;UBERON:0003126!2.13e-12!3;UBERON:0001005!2.13e-12!3;UBERON:0007196!2.13e-12!3;UBERON:0001558!2.13e-12!3;UBERON:0002384!1.18e-11!46;UBERON:0001474!3.57e-10!22;UBERON:0004765!3.57e-10!22;UBERON:0001434!3.57e-10!22;UBERON:0002193!4.24e-09!48;UBERON:0002390!3.14e-08!45;UBERON:0003061!3.14e-08!45 | |ontology_enrichment_uberon=UBERON:0002371!2.01e-14!16;UBERON:0003126!2.13e-12!3;UBERON:0001005!2.13e-12!3;UBERON:0007196!2.13e-12!3;UBERON:0001558!2.13e-12!3;UBERON:0002384!1.18e-11!46;UBERON:0001474!3.57e-10!22;UBERON:0004765!3.57e-10!22;UBERON:0001434!3.57e-10!22;UBERON:0002193!4.24e-09!48;UBERON:0002390!3.14e-08!45;UBERON:0003061!3.14e-08!45 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003126,3.41e-17,3;UBERON:0001005,3.41e-17,3;UBERON:0007196,3.41e-17,3;UBERON:0001558,3.41e-17,3;UBERON:0002371,9.61e-08,16 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.0797721589953364,0.342401459862411,0,0,0.404950534779652,1.39912375625629,0.473193248037357,0.548457734422955,0.42438965179803,0,0,0.261199789138935,0.159992422793407,0,0,0,0,0,0,0,8.25539875497521,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.7104801149461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0.0755715601067855,0.579728977403356,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08245520505607,1.01343946190039,0.505524445014783,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.03165135757089,1.08781136763742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0.448569283047378,0.503653849092235,0,0,0,0,0,0,0.460325236507177,0,3.78077001156113,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.0797721589953364,0.342401459862411,0,0,0.404950534779652,1.39912375625629,0.473193248037357,0.548457734422955,0.42438965179803,0,0,0.261199789138935,0.159992422793407,0,0,0,0,0,0,0,8.25539875497521,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.7104801149461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0.0755715601067855,0.579728977403356,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08245520505607,1.01343946190039,0.505524445014783,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.03165135757089,1.08781136763742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0.448569283047378,0.503653849092235,0,0,0,0,0,0,0.460325236507177,0,3.78077001156113,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr2:87685501..87685502,+ | |short_description=p@chr2:87685501..87685502,+ | ||
}} | }} |
Latest revision as of 14:36, 5 August 2015
Short description: | p@chr2:87685501..87685502, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:87685501..87685502, + |
Coexpression cluster: | MCL_coexpression_mm9:1657 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow macrophage | 5.70e-26 | 2 |
duct epithelial cell | 3.41e-17 | 3 |
epithelial cell of tracheobronchial tree | 3.41e-17 | 3 |
branched duct epithelial cell | 3.41e-17 | 3 |
epithelial cell of lower respiratory tract | 3.41e-17 | 3 |
respiratory epithelial cell | 3.41e-17 | 3 |
tracheal epithelial cell | 3.41e-17 | 3 |
tracheoblast | 3.41e-17 | 3 |
myeloid lineage restricted progenitor cell | 5.30e-16 | 13 |
monopoietic cell | 1.56e-13 | 4 |
myeloid leukocyte | 1.56e-13 | 4 |
phagocyte | 1.56e-13 | 4 |
monocyte | 1.56e-13 | 4 |
macrophage | 1.56e-13 | 4 |
tissue-resident macrophage | 1.56e-13 | 4 |
macrophage dendritic cell progenitor | 1.56e-13 | 4 |
monoblast | 1.56e-13 | 4 |
promonocyte | 1.56e-13 | 4 |
myeloid cell | 4.21e-13 | 16 |
common myeloid progenitor | 4.11e-11 | 19 |
hematopoietic lineage restricted progenitor cell | 1.49e-08 | 25 |
defensive cell | 3.78e-08 | 7 |
granulocyte monocyte progenitor cell | 3.78e-08 | 7 |
hematopoietic cell | 9.13e-07 | 32 |
hematopoietic oligopotent progenitor cell | 9.13e-07 | 32 |
hematopoietic stem cell | 9.13e-07 | 32 |
hematopoietic multipotent progenitor cell | 9.13e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
trachea | 3.41e-17 | 3 |
respiratory airway | 3.41e-17 | 3 |
tracheobronchial tree | 3.41e-17 | 3 |
lower respiratory tract | 3.41e-17 | 3 |
bone marrow | 9.61e-08 | 16 |