FFCP PHASE1:Mm9::chr5:20207947..20208032,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=50791 | |EntrezGene=50791 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=84 | |MCL_coexpression_id=84 | ||
|TSSclassifier=NA | |||
|UniProt=F6SW67 | |UniProt=F6SW67 | ||
|association_with_transcript=-62bp_to_ENSMUST00000101556,uc008wny.1_5end | |association_with_transcript=-62bp_to_ENSMUST00000101556,uc008wny.1_5end | ||
|cluster_id=chr5:20207947..20208032,+ | |||
|description=CAGE_peak_3_at_Magi2_5end | |description=CAGE_peak_3_at_Magi2_5end | ||
|id=chr5:20207947..20208032,+ | |id=chr5:20207947..20208032,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!5.61e-16!63;UBERON:0004121!4.14e-15!102;UBERON:0000924!4.14e-15!102;UBERON:0006601!4.14e-15!102;UBERON:0002346!8.28e-15!71;UBERON:0003075!8.28e-15!71;UBERON:0007284!8.28e-15!71;UBERON:0003056!1.97e-14!49;UBERON:0001017!8.41e-13!73;UBERON:0005743!8.41e-13!73;UBERON:0000073!3.41e-12!75;UBERON:0001016!3.41e-12!75;UBERON:0001049!6.69e-12!52;UBERON:0005068!6.69e-12!52;UBERON:0006241!6.69e-12!52;UBERON:0007135!6.69e-12!52;UBERON:0000955!1.20e-11!50;UBERON:0006238!1.20e-11!50;UBERON:0002616!3.51e-11!49;UBERON:0003080!1.05e-10!40;UBERON:0000153!1.43e-10!94;UBERON:0002780!3.01e-10!39;UBERON:0001890!3.01e-10!39;UBERON:0006240!3.01e-10!39;UBERON:0007811!4.46e-09!86;UBERON:0001894!2.50e-07!10;UBERON:0006222!2.50e-07!10 | |ontology_enrichment_uberon=UBERON:0000033!5.61e-16!63;UBERON:0004121!4.14e-15!102;UBERON:0000924!4.14e-15!102;UBERON:0006601!4.14e-15!102;UBERON:0002346!8.28e-15!71;UBERON:0003075!8.28e-15!71;UBERON:0007284!8.28e-15!71;UBERON:0003056!1.97e-14!49;UBERON:0001017!8.41e-13!73;UBERON:0005743!8.41e-13!73;UBERON:0000073!3.41e-12!75;UBERON:0001016!3.41e-12!75;UBERON:0001049!6.69e-12!52;UBERON:0005068!6.69e-12!52;UBERON:0006241!6.69e-12!52;UBERON:0007135!6.69e-12!52;UBERON:0000955!1.20e-11!50;UBERON:0006238!1.20e-11!50;UBERON:0002616!3.51e-11!49;UBERON:0003080!1.05e-10!40;UBERON:0000153!1.43e-10!94;UBERON:0002780!3.01e-10!39;UBERON:0001890!3.01e-10!39;UBERON:0006240!3.01e-10!39;UBERON:0007811!4.46e-09!86;UBERON:0001894!2.50e-07!10;UBERON:0006222!2.50e-07!10 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0010371,2.28e-16,73;UBERON:0002346,6.51e-16,64;UBERON:0003075,6.51e-16,64;UBERON:0007284,6.51e-16,64;UBERON:0004121,1.40e-15,95;UBERON:0000924,1.40e-15,95;UBERON:0006601,1.40e-15,95;UBERON:0003056,1.47e-14,49;UBERON:0001017,5.22e-13,73;UBERON:0001016,2.17e-12,75;UBERON:0000955,3.00e-12,47;UBERON:0006238,3.00e-12,47;UBERON:0001049,5.30e-12,52;UBERON:0005068,5.30e-12,52;UBERON:0006241,5.30e-12,52;UBERON:0007135,5.30e-12,52;UBERON:0010314,6.25e-12,92;UBERON:0002616,9.13e-12,46;UBERON:0000073,2.12e-11,54;UBERON:0003080,8.55e-11,40;UBERON:0002780,2.48e-10,39;UBERON:0001890,2.48e-10,39;UBERON:0006240,2.48e-10,39;UBERON:0001894,2.20e-07,10;UBERON:0006222,2.20e-07,10 | |||
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| ||
|short_description=p3@Magi2 | |short_description=p3@Magi2 | ||
}} | }} |
Latest revision as of 19:47, 25 September 2015
Short description: | p3@Magi2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Magi2_5end |
Coexpression cluster: | MCL_coexpression_mm9:84 |
Association with transcript: | -62bp_to_ENSMUST00000101556, uc008wny.1_5end |
EntrezGene: | Magi2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ecto-epithelium | 2.28e-16 | 73 |
neurectoderm | 6.51e-16 | 64 |
neural plate | 6.51e-16 | 64 |
presumptive neural plate | 6.51e-16 | 64 |
ectoderm-derived structure | 1.40e-15 | 95 |
ectoderm | 1.40e-15 | 95 |
presumptive ectoderm | 1.40e-15 | 95 |
pre-chordal neural plate | 1.47e-14 | 49 |
central nervous system | 5.22e-13 | 73 |
nervous system | 2.17e-12 | 75 |
brain | 3.00e-12 | 47 |
future brain | 3.00e-12 | 47 |
neural tube | 5.30e-12 | 52 |
neural rod | 5.30e-12 | 52 |
future spinal cord | 5.30e-12 | 52 |
neural keel | 5.30e-12 | 52 |
structure with developmental contribution from neural crest | 6.25e-12 | 92 |
regional part of brain | 9.13e-12 | 46 |
regional part of nervous system | 2.12e-11 | 54 |
anterior neural tube | 8.55e-11 | 40 |
regional part of forebrain | 2.48e-10 | 39 |
forebrain | 2.48e-10 | 39 |
future forebrain | 2.48e-10 | 39 |
diencephalon | 2.20e-07 | 10 |
future diencephalon | 2.20e-07 | 10 |