FFCP PHASE1:Mm9::chr1:157077321..157077330,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=84 | |MCL_coexpression_id=84 | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:157077321..157077330,- | |||
|description=CAGE_peak_at_chr1:157077321..157077330,- | |description=CAGE_peak_at_chr1:157077321..157077330,- | ||
|id=chr1:157077321..157077330,- | |id=chr1:157077321..157077330,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!9.18e-12!71;UBERON:0003075!9.18e-12!71;UBERON:0007284!9.18e-12!71;UBERON:0002021!2.48e-10!10;UBERON:0000411!2.48e-10!10;UBERON:0001950!2.48e-10!10;UBERON:0001049!2.94e-10!52;UBERON:0005068!2.94e-10!52;UBERON:0006241!2.94e-10!52;UBERON:0007135!2.94e-10!52;UBERON:0000033!6.80e-10!63;UBERON:0004121!6.07e-09!102;UBERON:0000924!6.07e-09!102;UBERON:0006601!6.07e-09!102;UBERON:0001017!9.00e-09!73;UBERON:0005743!9.00e-09!73;UBERON:0000955!1.76e-08!50;UBERON:0006238!1.76e-08!50;UBERON:0003056!2.26e-08!49;UBERON:0000073!2.67e-08!75;UBERON:0001016!2.67e-08!75;UBERON:0002020!6.20e-08!34;UBERON:0002616!9.34e-08!49;UBERON:0002619!3.18e-07!17;UBERON:0000153!9.70e-07!94 | |ontology_enrichment_uberon=UBERON:0002346!9.18e-12!71;UBERON:0003075!9.18e-12!71;UBERON:0007284!9.18e-12!71;UBERON:0002021!2.48e-10!10;UBERON:0000411!2.48e-10!10;UBERON:0001950!2.48e-10!10;UBERON:0001049!2.94e-10!52;UBERON:0005068!2.94e-10!52;UBERON:0006241!2.94e-10!52;UBERON:0007135!2.94e-10!52;UBERON:0000033!6.80e-10!63;UBERON:0004121!6.07e-09!102;UBERON:0000924!6.07e-09!102;UBERON:0006601!6.07e-09!102;UBERON:0001017!9.00e-09!73;UBERON:0005743!9.00e-09!73;UBERON:0000955!1.76e-08!50;UBERON:0006238!1.76e-08!50;UBERON:0003056!2.26e-08!49;UBERON:0000073!2.67e-08!75;UBERON:0001016!2.67e-08!75;UBERON:0002020!6.20e-08!34;UBERON:0002616!9.34e-08!49;UBERON:0002619!3.18e-07!17;UBERON:0000153!9.70e-07!94 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.04e-10,64;UBERON:0003075,1.04e-10,64;UBERON:0007284,1.04e-10,64;UBERON:0001049,1.53e-10,52;UBERON:0005068,1.53e-10,52;UBERON:0006241,1.53e-10,52;UBERON:0007135,1.53e-10,52;UBERON:0002259,8.42e-10,1;UBERON:0002314,8.42e-10,1;UBERON:0004061,8.42e-10,1;UBERON:0006777,8.42e-10,1;UBERON:0005882,8.42e-10,1;UBERON:0002950,1.54e-09,4;UBERON:0001891,1.54e-09,4;UBERON:0009616,1.54e-09,4;UBERON:0010286,1.54e-09,4;UBERON:0010371,2.53e-09,73;UBERON:0000073,9.60e-08,54;UBERON:0001017,2.27e-07,73;UBERON:0003076,2.48e-07,12;UBERON:0003057,2.48e-07,12;UBERON:0010314,2.82e-07,92;UBERON:0001016,3.69e-07,75;UBERON:0004121,5.01e-07,95;UBERON:0000924,5.01e-07,95;UBERON:0006601,5.01e-07,95;UBERON:0002240,6.99e-07,6;UBERON:0005174,6.99e-07,6;UBERON:0001137,6.99e-07,6;UBERON:0002616,8.30e-07,46 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0.194429899074283,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384218305321555,0,0,0,1.71390590642282,0.883474163806454,0,0.0958454710182364,0,0,0.383062014255563,0.153606533256243,0.131886287730194,0,0,1.3959149950069,0,0,0.294628585473668,0.569486723196412,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251333182659351,0,0.578397427679647,0,0,0,0.484875253135222,0,0,0,0,0,0,0,1.04853447583376,0,0,0.347648640384553,0.767146371990992,0.41557608911912,0,0.101839363850316,0.124406970610093,0,0.420883711772948,0,0.229902104433473,0.180062129805349,0,0.272145996605311,0,0.0937017245597288,1.03481348295606,0.215567992932842,0,0.527853372491847,0,0.556094498451196,0,0.61734640922383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,0,0,0,0.264450566663544,0,0,0,0,0,0.190225626112559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0,0.157635144106191,0,0,0,0,0,0,0,0,0,2.56880943980467,0.937693492737625,0,0.252470927204373,0,0,0.646270193198397,0,0,0,0,0,0,0.963963949265421,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.87274856685985,0,0,0,0,0,0.164549020602121,0,0,0,0,0,0,0.0603129249281559,0.238744688006273,0,0,4.07935664423121,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0.108005340821801,0,0,0.134864346384821,0.0826534557253359,0,0,0,0,0.149516546043979,0,0.194451188344048,0.258319646955462,0,0.117357238645754,0.2604087696879,0,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0,0,0.183151624267265,0,0,0.564751842617067,1.84130094602871,1.71868654031819,0.68741272937475,0.685082519770642,0.755393897389701,0.675022500231806,0,0.906284817968409,0.51776031175182,0,0,0,0,0.209613162627982,0,0.44449345560323,0,0,0,0,0.188626341386076,0.0936415074698824,0.192075457214608,0.114870937911227,0.476293691283074,0,0,0,0,1.37147700954166,0,0,0,0,0.169229215783353,0,0,0.135804113845862,0,0.237270036248348,0.0985044823755635,0.818462086339379,0.154936841185966,0,0,0,0,0,0,0.463735671240843 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0.194429899074283,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384218305321555,0,0,0,1.71390590642282,0.883474163806454,0,0.0958454710182364,0,0,0.383062014255563,0.153606533256243,0.131886287730194,0,0,1.3959149950069,0,0,0.294628585473668,0.569486723196412,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251333182659351,0,0.578397427679647,0,0,0,0.484875253135222,0,0,0,0,0,0,0,1.04853447583376,0,0,0.347648640384553,0.767146371990992,0.41557608911912,0,0.101839363850316,0.124406970610093,0,0.420883711772948,0,0.229902104433473,0.180062129805349,0,0.272145996605311,0,0.0937017245597288,1.03481348295606,0.215567992932842,0,0.527853372491847,0,0.556094498451196,0,0.61734640922383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,0,0,0,0.264450566663544,0,0,0,0,0,0.190225626112559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0,0.157635144106191,0,0,0,0,0,0,0,0,0,2.56880943980467,0.937693492737625,0,0.252470927204373,0,0,0.646270193198397,0,0,0,0,0,0,0.963963949265421,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.87274856685985,0,0,0,0,0,0.164549020602121,0,0,0,0,0,0,0.0603129249281559,0.238744688006273,0,0,4.07935664423121,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0.108005340821801,0,0,0.134864346384821,0.0826534557253359,0,0,0,0,0.149516546043979,0,0.194451188344048,0.258319646955462,0,0.117357238645754,0.2604087696879,0,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0,0,0.183151624267265,0,0,0.564751842617067,1.84130094602871,1.71868654031819,0.68741272937475,0.685082519770642,0.755393897389701,0.675022500231806,0,0.906284817968409,0.51776031175182,0,0,0,0,0.209613162627982,0,0.44449345560323,0,0,0,0,0.188626341386076,0.0936415074698824,0.192075457214608,0.114870937911227,0.476293691283074,0,0,0,0,1.37147700954166,0,0,0,0,0.169229215783353,0,0,0.135804113845862,0,0.237270036248348,0.0985044823755635,0.818462086339379,0.154936841185966,0,0,0,0,0,0,0.463735671240843 | ||
|short_description=p@chr1:157077321..157077330,- | |short_description=p@chr1:157077321..157077330,- | ||
}} | }} |
Latest revision as of 01:18, 5 August 2015
Short description: | p@chr1:157077321..157077330, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:157077321..157077330, - |
Coexpression cluster: | MCL_coexpression_mm9:84 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neurectoderm | 1.04e-10 | 64 |
neural plate | 1.04e-10 | 64 |
presumptive neural plate | 1.04e-10 | 64 |
neural tube | 1.53e-10 | 52 |
neural rod | 1.53e-10 | 52 |
future spinal cord | 1.53e-10 | 52 |
neural keel | 1.53e-10 | 52 |
corpora quadrigemina | 8.42e-10 | 1 |
midbrain tectum | 8.42e-10 | 1 |
neural tube mantle layer | 8.42e-10 | 1 |
tectal plate | 8.42e-10 | 1 |
neural tube alar plate | 8.42e-10 | 1 |
regional part of midbrain | 1.54e-09 | 4 |
midbrain | 1.54e-09 | 4 |
presumptive midbrain | 1.54e-09 | 4 |
midbrain neural tube | 1.54e-09 | 4 |
ecto-epithelium | 2.53e-09 | 73 |
regional part of nervous system | 9.60e-08 | 54 |
central nervous system | 2.27e-07 | 73 |
posterior neural tube | 2.48e-07 | 12 |
chordal neural plate | 2.48e-07 | 12 |
structure with developmental contribution from neural crest | 2.82e-07 | 92 |
nervous system | 3.69e-07 | 75 |
ectoderm-derived structure | 5.01e-07 | 95 |
ectoderm | 5.01e-07 | 95 |
presumptive ectoderm | 5.01e-07 | 95 |
spinal cord | 6.99e-07 | 6 |
dorsal region element | 6.99e-07 | 6 |
dorsum | 6.99e-07 | 6 |
regional part of brain | 8.30e-07 | 46 |