FFCP PHASE1:Mm9::chr3:95426158..95426169,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene= | |EntrezGene= | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=81 | |MCL_coexpression_id=81 | ||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-30bp_to_ENSMUST00000074353_5end | |association_with_transcript=-30bp_to_ENSMUST00000074353_5end | ||
|cluster_id=chr3:95426158..95426169,+ | |||
|description=CAGE_peak_1_at_ENSMUST00000074353_5end | |description=CAGE_peak_1_at_ENSMUST00000074353_5end | ||
|id=chr3:95426158..95426169,+ | |id=chr3:95426158..95426169,+ | ||
|ontology_enrichment_celltype=CL:0000063!4.55e-21!66;CL:0000144!4.98e-14!121;CL:0000012!4.98e-14!121;CL:0000988!3.40e-13!32;CL:0002032!3.40e-13!32;CL:0000037!3.40e-13!32;CL:0000566!3.40e-13!32;CL:0000837!3.40e-13!32;CL:0002371!8.69e-13!118;CL:0002320!7.36e-12!46;CL:0000134!7.36e-12!46;CL:0000548!1.05e-11!115;CL:0000004!1.05e-11!115;CL:0000255!1.05e-11!115;CL:0002031!3.14e-11!25;CL:0000219!6.79e-11!54;CL:0000838!9.02e-09!12;CL:0000034!2.98e-08!97;CL:0000084!4.27e-08!11;CL:0000827!4.27e-08!11;CL:0002076!6.61e-08!15;CL:0000542!1.68e-07!13;CL:0000051!1.68e-07!13;CL:0000791!2.28e-07!9;CL:0000789!2.28e-07!9;CL:0002420!2.28e-07!9;CL:0002419!2.28e-07!9;CL:0000790!2.28e-07!9;CL:0000738!3.86e-07!17;CL:0002087!3.86e-07!17;CL:0000049!4.76e-07!19 | |ontology_enrichment_celltype=CL:0000063!4.55e-21!66;CL:0000144!4.98e-14!121;CL:0000012!4.98e-14!121;CL:0000988!3.40e-13!32;CL:0002032!3.40e-13!32;CL:0000037!3.40e-13!32;CL:0000566!3.40e-13!32;CL:0000837!3.40e-13!32;CL:0002371!8.69e-13!118;CL:0002320!7.36e-12!46;CL:0000134!7.36e-12!46;CL:0000548!1.05e-11!115;CL:0000004!1.05e-11!115;CL:0000255!1.05e-11!115;CL:0002031!3.14e-11!25;CL:0000219!6.79e-11!54;CL:0000838!9.02e-09!12;CL:0000034!2.98e-08!97;CL:0000084!4.27e-08!11;CL:0000827!4.27e-08!11;CL:0002076!6.61e-08!15;CL:0000542!1.68e-07!13;CL:0000051!1.68e-07!13;CL:0000791!2.28e-07!9;CL:0000789!2.28e-07!9;CL:0002420!2.28e-07!9;CL:0002419!2.28e-07!9;CL:0000790!2.28e-07!9;CL:0000738!3.86e-07!17;CL:0002087!3.86e-07!17;CL:0000049!4.76e-07!19 | ||
|ontology_enrichment_celltype_v019_2=CL:0000988,2.49e-13,32;CL:0002032,2.49e-13,32;CL:0000037,2.49e-13,32;CL:0000837,2.49e-13,32;CL:0002320,2.90e-12,46;CL:0000134,2.90e-12,46;CL:0002031,1.92e-11,25;CL:0000219,3.81e-11,54;CL:0000838,6.94e-09,12;CL:0000034,1.67e-08,97;CL:0000084,3.37e-08,11;CL:0000827,3.37e-08,11;CL:0002076,5.25e-08,15;CL:0000542,1.78e-07,13;CL:0000051,1.78e-07,13;CL:0000791,1.84e-07,9;CL:0000789,1.84e-07,9;CL:0002420,1.84e-07,9;CL:0002419,1.84e-07,9;CL:0000790,1.84e-07,9;CL:0000049,3.44e-07,19;CL:0000738,3.49e-07,17;CL:0002087,3.49e-07,17;CL:0000066,6.14e-07,25;CL:0000624,9.17e-07,8 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!7.36e-12!46;UBERON:0002193!1.14e-08!48;UBERON:0002390!1.76e-08!45;UBERON:0003061!1.76e-08!45 | |ontology_enrichment_uberon=UBERON:0002384!7.36e-12!46;UBERON:0002193!1.14e-08!48;UBERON:0002390!1.76e-08!45;UBERON:0003061!1.76e-08!45 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.90e-12,46;UBERON:0002193,1.33e-08,48;UBERON:0002405,1.33e-08,48;UBERON:0002390,2.41e-08,45;UBERON:0003061,2.41e-08,45;UBERON:0000490,7.41e-07,66 | |||
|phase1_expression=27.3854528549198,11.5161884520989,8.64498554840118,20.5675663688644,27.5492651470491,28.875234768845,74.7560449905682,147.975328664046,289.039246577372,226.106332427046,234.397398500716,112.797832819406,247.898656940386,173.004976387196,1.33243904726265,130.799022733828,137.813689991245,198.583433093011,178.385878121066,151.931495343695,0.935476191661768,3.17731043842833,168.996263572891,87.1958704224066,93.5989866754054,25.2662064210609,24.5534337810673,26.9339040857361,80.3799064300462,30.7476758307116,29.9336189384661,60.327913978665,1.84519436275371,63.3926724061755,49.1047753577167,75.4705289927555,42.2630567463104,11.7188856606334,32.0347491254758,27.2232346866375,13.5293242247133,12.9778642142105,14.0798002379035,3.27331726736501,2.93993100536592,2.0190142737785,2.34717403304412,1.74420125104357,0.878744730937887,0.972149495371417,2.65974201088189,0,247.143778723046,257.503560414027,257.111756343985,2.31533492432352,2.0057340795713,2.06268836910977,2.42779753031517,1.5869729378161,1.90149421051854,3.38844532069132,6.22506357277798,1.7997994345628,0.988866362566974,2.8419204597844,1.79760066311043,0.384218305321555,1.76272340924412,1.35005938331691,1.26194976810829,1.14260393761521,1.54607978666129,1.71487118900936,2.01275489138296,0,0,0.127687338085188,0.614426133024974,1.31886287730194,1.46380229763855,1.56274011167028,1.95428099300967,1.12552522006336,0,0.294628585473668,0.854230084794618,1.3047961207771,91.7801463198191,72.5486977025141,60.0019491612473,57.6483997577529,1.3599426674155,0,0,0,1.12355536105401,3.74946709671727,162.885824885999,212.003744706204,30.9855523508697,98.8113876090247,28.028576367731,21.3320010945999,139.203739370211,143.908403589856,128.90873347877,0.79928715803342,0.258937883647172,0.890652834388949,1.73485326766136,2.74018930480927,1.15307748628029,0.753613202763113,1.41106448562846,0.251333182659351,1.48316980640624,0.722996784599558,0,1.29413479957927,0.220841518460394,0.484875253135222,0,0,0.628340120440365,1.02182822083437,89.7415282549343,131.97860081855,78.4023301040809,0.149790639404823,0,0.376963056338593,0.695297280769106,0.255715457330331,1.24672826735736,1.1356888414743,2.54598409625791,2.11491850037158,0,1.68353484709179,2.86264974517948,2.75882525320168,0.900310649026746,1.9591626318643,1.49680298132921,0.768682321709099,1.49922759295566,2.32833033665114,1.29340795759705,1.32374256117473,1.93546236580344,1.7535658594206,1.39023624612799,0.348252166522167,1.64625709126355,2.38841120182192,70.2213187313235,145.401567519814,3.40996199274711,1.24275463521301,2.34526059981096,1.08037236876609,1.89395788468168,0.787056926989615,1.23413690309903,1.86027155800326,1.87791380979733,1.28441876603886,0.987359099480883,1.64167464079095,0.648550476366846,0.730999937126662,1.3173006917463,0.402619256281115,0.210289948564127,0.92614151141356,0.660837565967596,0.528901133327089,0.853153002140936,2.32236671860439,1.54640953586512,1.00841762311671,1.77902435075896,0.951128130562796,1.42358718463353,3.29397909448022,2.01068167040216,1.79060824837036,1.16978452271472,1.79763881730844,1.29682829924817,0.995706366271836,4.36236172192088,1.82797620175566,2.25415471346161,1.4255592949172,1.74557238450863,1.19230893813542,0.505892296994058,0.590440591918409,0.470996183524124,1.1105744752962,1.1858105083486,2.16898637430922,1.76903095601883,2.02375901146368,1.42002084971952,2.41177159752417,3.8193877767213,1.15078454980324,1.78348749452539,1.37280706594041,1.43768206527355,0,0.936113019343682,1.51547326768267,0.538192240565737,0.964887042726734,1.47802552133284,2.27389694124582,2.93336957595647,1.86719594352707,1.64283173801951,2.1775813467436,0.952174563544055,0.780534591431195,0.472905432318573,1.7717175171902,0.637819074629948,1.14704320301017,0.863424909329478,1.44649058581512,129.680504187774,107.149419712286,0.983528546038072,2.20749397043786,0.321101179975584,0.35163505977661,5.08198330667694,1.26235463602186,0.94652465824877,0.780877488593277,1.50796378412959,0.955875191810208,1.55959071857676,0.849229592366497,2.42886421004937,0.876767573733936,1.18586333383957,0,1.13552068166615,3.73937767701236,2.44330439030364,1.81467135269789,2.65490276679926,2.6705869977048,2.72091201268276,3.58349651536206,2.65771703592696,3.68922177532713,1.80899805217755,1.45413491791002,1.78248689192361,2.52829406348653,2.10837217149998,4.12542172992747,1.70219802876894,1.62054984628179,2.45781499187234,1.28602221018955,1.77340233642274,1.60531935841864,1.64549020602121,2.43571959291679,1.17335854031855,1.27099242518292,2.20528398054962,0.98931751764888,2.26050197374268,0.965006798850494,1.43246812803764,0.164140899745061,2.91480836629851,0.741701208042039,3.2465467351592,3.30218988741156,1.29636169158798,1.69531611304222,1.50363650493128,1.60144721244566,44.7043270883839,49.5428141225749,48.2317908577439,4.77335309007557,2.37251995185852,3.25311147402958,1.40406943068342,1.04544148007234,1.9652630737156,1.34864346384821,1.73572257023205,1.04702376793612,1.16653475962614,0,0,1.94371509857172,2.48187735685646,2.33341426012857,3.22899558694328,1.520605129417,2.58185925020659,1.3020438484395,1.78260885523708,0.483168241652012,0.288030006257865,0.948033361884535,4.25722952109345,2.36235201479103,4.54722880422283,2.68540043501222,3.57626438606277,2.28371354087941,2.65841148914239,2.82706059854813,1.600342939755,1.81487133246313,1.8516997340553,1.53938946624527,1.63627663054197,0.906921534460845,87.9064375361296,96.5321097117959,80.5846158547577,1.35232715822533,2.064507229963,1.46521299413812,2.14368379079066,1.00314420807073,0,0.460325236507177,0,19.5912627871804,0.685082519770642,0,0,0.45032120322422,0,0,1.764384908931,0,0.682934423016537,1.45864030240976,2.09613162627982,2.02227859295016,0.888986911206461,1.85431551515005,1.60459604795908,2.27427490587418,1.77435509923168,2.26351609663291,1.40462261204824,1.47257850531199,0.976402972245426,1.90517476513229,0.463537303779422,0.964546102318525,1.23625770240992,2.50238164228475,1.71434626192708,1.95223386775271,1.43061713968393,2.32554266611726,1.03520318456864,1.35383372626682,1.09756783723664,0.789209134313529,1.35804113845862,1.12228454331548,1.06771516311757,0.886540341380071,1.22769312950907,2.01417893541756,1.54325288784913,1.99848462350357,0.935726433781634,1.50409737833809,1.91288332068843,1.32354851471709,1.15933917810211 | |phase1_expression=27.3854528549198,11.5161884520989,8.64498554840118,20.5675663688644,27.5492651470491,28.875234768845,74.7560449905682,147.975328664046,289.039246577372,226.106332427046,234.397398500716,112.797832819406,247.898656940386,173.004976387196,1.33243904726265,130.799022733828,137.813689991245,198.583433093011,178.385878121066,151.931495343695,0.935476191661768,3.17731043842833,168.996263572891,87.1958704224066,93.5989866754054,25.2662064210609,24.5534337810673,26.9339040857361,80.3799064300462,30.7476758307116,29.9336189384661,60.327913978665,1.84519436275371,63.3926724061755,49.1047753577167,75.4705289927555,42.2630567463104,11.7188856606334,32.0347491254758,27.2232346866375,13.5293242247133,12.9778642142105,14.0798002379035,3.27331726736501,2.93993100536592,2.0190142737785,2.34717403304412,1.74420125104357,0.878744730937887,0.972149495371417,2.65974201088189,0,247.143778723046,257.503560414027,257.111756343985,2.31533492432352,2.0057340795713,2.06268836910977,2.42779753031517,1.5869729378161,1.90149421051854,3.38844532069132,6.22506357277798,1.7997994345628,0.988866362566974,2.8419204597844,1.79760066311043,0.384218305321555,1.76272340924412,1.35005938331691,1.26194976810829,1.14260393761521,1.54607978666129,1.71487118900936,2.01275489138296,0,0,0.127687338085188,0.614426133024974,1.31886287730194,1.46380229763855,1.56274011167028,1.95428099300967,1.12552522006336,0,0.294628585473668,0.854230084794618,1.3047961207771,91.7801463198191,72.5486977025141,60.0019491612473,57.6483997577529,1.3599426674155,0,0,0,1.12355536105401,3.74946709671727,162.885824885999,212.003744706204,30.9855523508697,98.8113876090247,28.028576367731,21.3320010945999,139.203739370211,143.908403589856,128.90873347877,0.79928715803342,0.258937883647172,0.890652834388949,1.73485326766136,2.74018930480927,1.15307748628029,0.753613202763113,1.41106448562846,0.251333182659351,1.48316980640624,0.722996784599558,0,1.29413479957927,0.220841518460394,0.484875253135222,0,0,0.628340120440365,1.02182822083437,89.7415282549343,131.97860081855,78.4023301040809,0.149790639404823,0,0.376963056338593,0.695297280769106,0.255715457330331,1.24672826735736,1.1356888414743,2.54598409625791,2.11491850037158,0,1.68353484709179,2.86264974517948,2.75882525320168,0.900310649026746,1.9591626318643,1.49680298132921,0.768682321709099,1.49922759295566,2.32833033665114,1.29340795759705,1.32374256117473,1.93546236580344,1.7535658594206,1.39023624612799,0.348252166522167,1.64625709126355,2.38841120182192,70.2213187313235,145.401567519814,3.40996199274711,1.24275463521301,2.34526059981096,1.08037236876609,1.89395788468168,0.787056926989615,1.23413690309903,1.86027155800326,1.87791380979733,1.28441876603886,0.987359099480883,1.64167464079095,0.648550476366846,0.730999937126662,1.3173006917463,0.402619256281115,0.210289948564127,0.92614151141356,0.660837565967596,0.528901133327089,0.853153002140936,2.32236671860439,1.54640953586512,1.00841762311671,1.77902435075896,0.951128130562796,1.42358718463353,3.29397909448022,2.01068167040216,1.79060824837036,1.16978452271472,1.79763881730844,1.29682829924817,0.995706366271836,4.36236172192088,1.82797620175566,2.25415471346161,1.4255592949172,1.74557238450863,1.19230893813542,0.505892296994058,0.590440591918409,0.470996183524124,1.1105744752962,1.1858105083486,2.16898637430922,1.76903095601883,2.02375901146368,1.42002084971952,2.41177159752417,3.8193877767213,1.15078454980324,1.78348749452539,1.37280706594041,1.43768206527355,0,0.936113019343682,1.51547326768267,0.538192240565737,0.964887042726734,1.47802552133284,2.27389694124582,2.93336957595647,1.86719594352707,1.64283173801951,2.1775813467436,0.952174563544055,0.780534591431195,0.472905432318573,1.7717175171902,0.637819074629948,1.14704320301017,0.863424909329478,1.44649058581512,129.680504187774,107.149419712286,0.983528546038072,2.20749397043786,0.321101179975584,0.35163505977661,5.08198330667694,1.26235463602186,0.94652465824877,0.780877488593277,1.50796378412959,0.955875191810208,1.55959071857676,0.849229592366497,2.42886421004937,0.876767573733936,1.18586333383957,0,1.13552068166615,3.73937767701236,2.44330439030364,1.81467135269789,2.65490276679926,2.6705869977048,2.72091201268276,3.58349651536206,2.65771703592696,3.68922177532713,1.80899805217755,1.45413491791002,1.78248689192361,2.52829406348653,2.10837217149998,4.12542172992747,1.70219802876894,1.62054984628179,2.45781499187234,1.28602221018955,1.77340233642274,1.60531935841864,1.64549020602121,2.43571959291679,1.17335854031855,1.27099242518292,2.20528398054962,0.98931751764888,2.26050197374268,0.965006798850494,1.43246812803764,0.164140899745061,2.91480836629851,0.741701208042039,3.2465467351592,3.30218988741156,1.29636169158798,1.69531611304222,1.50363650493128,1.60144721244566,44.7043270883839,49.5428141225749,48.2317908577439,4.77335309007557,2.37251995185852,3.25311147402958,1.40406943068342,1.04544148007234,1.9652630737156,1.34864346384821,1.73572257023205,1.04702376793612,1.16653475962614,0,0,1.94371509857172,2.48187735685646,2.33341426012857,3.22899558694328,1.520605129417,2.58185925020659,1.3020438484395,1.78260885523708,0.483168241652012,0.288030006257865,0.948033361884535,4.25722952109345,2.36235201479103,4.54722880422283,2.68540043501222,3.57626438606277,2.28371354087941,2.65841148914239,2.82706059854813,1.600342939755,1.81487133246313,1.8516997340553,1.53938946624527,1.63627663054197,0.906921534460845,87.9064375361296,96.5321097117959,80.5846158547577,1.35232715822533,2.064507229963,1.46521299413812,2.14368379079066,1.00314420807073,0,0.460325236507177,0,19.5912627871804,0.685082519770642,0,0,0.45032120322422,0,0,1.764384908931,0,0.682934423016537,1.45864030240976,2.09613162627982,2.02227859295016,0.888986911206461,1.85431551515005,1.60459604795908,2.27427490587418,1.77435509923168,2.26351609663291,1.40462261204824,1.47257850531199,0.976402972245426,1.90517476513229,0.463537303779422,0.964546102318525,1.23625770240992,2.50238164228475,1.71434626192708,1.95223386775271,1.43061713968393,2.32554266611726,1.03520318456864,1.35383372626682,1.09756783723664,0.789209134313529,1.35804113845862,1.12228454331548,1.06771516311757,0.886540341380071,1.22769312950907,2.01417893541756,1.54325288784913,1.99848462350357,0.935726433781634,1.50409737833809,1.91288332068843,1.32354851471709,1.15933917810211 | ||
|short_description=p1@ENSMUST00000074353 | |short_description=p1@ENSMUST00000074353 | ||
}} | }} |
Latest revision as of 08:31, 4 August 2015
Short description: | p1@ENSMUST00000074353 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENSMUST00000074353_5end |
Coexpression cluster: | MCL_coexpression_mm9:81 |
Association with transcript: | -30bp_to_ENSMUST00000074353_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 2.49e-13 | 32 |
hematopoietic oligopotent progenitor cell | 2.49e-13 | 32 |
hematopoietic stem cell | 2.49e-13 | 32 |
hematopoietic multipotent progenitor cell | 2.49e-13 | 32 |
connective tissue cell | 2.90e-12 | 46 |
mesenchymal cell | 2.90e-12 | 46 |
hematopoietic lineage restricted progenitor cell | 1.92e-11 | 25 |
motile cell | 3.81e-11 | 54 |
lymphoid lineage restricted progenitor cell | 6.94e-09 | 12 |
stem cell | 1.67e-08 | 97 |
T cell | 3.37e-08 | 11 |
pro-T cell | 3.37e-08 | 11 |
endo-epithelial cell | 5.25e-08 | 15 |
lymphocyte | 1.78e-07 | 13 |
common lymphoid progenitor | 1.78e-07 | 13 |
mature alpha-beta T cell | 1.84e-07 | 9 |
alpha-beta T cell | 1.84e-07 | 9 |
immature T cell | 1.84e-07 | 9 |
mature T cell | 1.84e-07 | 9 |
immature alpha-beta T cell | 1.84e-07 | 9 |
common myeloid progenitor | 3.44e-07 | 19 |
leukocyte | 3.49e-07 | 17 |
nongranular leukocyte | 3.49e-07 | 17 |
epithelial cell | 6.14e-07 | 25 |
CD4-positive, alpha-beta T cell | 9.17e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 2.90e-12 | 46 |
hemolymphoid system | 1.33e-08 | 48 |
immune system | 1.33e-08 | 48 |
hematopoietic system | 2.41e-08 | 45 |
blood island | 2.41e-08 | 45 |
unilaminar epithelium | 7.41e-07 | 66 |