FFCP PHASE1:Hg19::chr2:241507962..241507997,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:241507962..241507997,+
|short_description=p2@RNPEPL1
|description=CAGE_peak_2_at_RNPEPL1_5end
|association_with_transcript=-6bp_to_NM_018226_5end
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=57140 | |EntrezGene=57140 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10079 | |HGNC=10079 | ||
|TSSclassifier=strong | |||
|UniProt=Q9HAU8 | |UniProt=Q9HAU8 | ||
|association_with_transcript=-6bp_to_NM_018226_5end | |||
|cluster_id=chr2:241507962..241507997,+ | |||
|description=CAGE_peak_2_at_RNPEPL1_5end | |||
|id=chr2:241507962..241507997,+ | |||
|ontology_enrichment_celltype=CL:0002087!7.31e-26!119;CL:0000738!2.70e-24!140;CL:0002194!3.07e-24!63;CL:0000576!3.07e-24!63;CL:0000040!3.07e-24!63;CL:0000559!3.07e-24!63;CL:0000766!4.22e-24!76;CL:0002057!5.08e-24!42;CL:0000860!4.93e-23!45;CL:0000839!4.39e-22!70;CL:0002009!7.21e-22!65;CL:0002031!1.61e-21!124;CL:0000988!5.11e-19!182;CL:0000557!5.38e-19!71;CL:0002032!2.18e-18!165;CL:0000837!2.18e-18!165;CL:0000037!6.52e-18!172;CL:0000566!6.52e-18!172;CL:0000763!5.38e-15!112;CL:0000049!5.38e-15!112;CL:0000791!5.36e-10!18;CL:0000789!5.36e-10!18;CL:0002420!5.36e-10!18;CL:0002419!5.36e-10!18;CL:0000790!5.36e-10!18;CL:0000084!2.24e-07!25;CL:0000827!2.24e-07!25;CL:0000625!5.79e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.34e-18;33!CL:0002057;1.34e-18;33!CL:0000473;1.65e-16;39!CL:0000234;1.65e-16;39!CL:0000576;8.29e-16;48!CL:0000766;5.08e-12;69!CL:0000791;1.75e-10;18!CL:0000789;1.75e-10;18!CL:0002419;1.75e-10;18!CL:0002087;2.54e-08;104!CL:0000084;1.22e-07;25!CL:0000625;2.40e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0002087,4.44e-27,115;CL:0002194,1.21e-26,59;CL:0000576,1.21e-26,59;CL:0000040,1.21e-26,59;CL:0000559,1.21e-26,59;CL:0000473,1.52e-26,48;CL:0000234,1.52e-26,48;CL:0000766,1.68e-26,72;CL:0000738,2.87e-26,136;CL:0000860,3.18e-25,42;CL:0002057,3.18e-25,42;CL:0002009,1.40e-24,61;CL:0000839,2.24e-24,66;CL:0002031,4.56e-23,120;CL:0000557,1.79e-21,67;CL:0000988,1.40e-20,177;CL:0002032,7.42e-20,161;CL:0000837,7.42e-20,161;CL:0000037,1.00e-19,168;CL:0000763,6.82e-17,108;CL:0000049,6.82e-17,108;CL:0000791,1.90e-10,18;CL:0000789,1.90e-10,18;CL:0002420,1.90e-10,18;CL:0002419,1.90e-10,18;CL:0000790,1.90e-10,18;CL:0000084,1.52e-07,25;CL:0000827,1.52e-07,25;CL:0000625,2.97e-07,11 | |||
|ontology_enrichment_development_v019=CL:0002057;1.19e-18;42!CL:0000790;1.75e-10;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!6.97e-22!112;UBERON:0002390!8.65e-22!102;UBERON:0003061!8.65e-22!102;UBERON:0003081!3.19e-17!216;UBERON:0002371!3.04e-15!80;UBERON:0001474!4.22e-14!86;UBERON:0002405!1.51e-13!115;UBERON:0004765!8.48e-10!101;UBERON:0001434!8.48e-10!101;UBERON:0000178!7.53e-08!15;UBERON:0000179!7.53e-08!15;UBERON:0000463!7.53e-08!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.60e-08;15!UBERON:0000179;4.60e-08;15!UBERON:0000463;4.60e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.29e-25,108;UBERON:0002390,3.65e-25,98;UBERON:0003061,3.65e-25,98;UBERON:0002405,8.84e-19,93;UBERON:0003081,1.65e-18,203;UBERON:0002371,4.05e-18,76;UBERON:0001474,1.12e-16,82;UBERON:0004765,9.56e-13,90;UBERON:0001434,1.83e-10,100;UBERON:0000178,3.46e-08,15;UBERON:0000179,3.46e-08,15;UBERON:0000463,3.46e-08,15 | |||
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| ||
|short_description=p2@RNPEPL1 | |||
}} | }} |
Latest revision as of 08:06, 16 September 2015
Short description: | p2@RNPEPL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RNPEPL1_5end |
Coexpression cluster: | NA |
Association with transcript: | -6bp_to_NM_018226_5end |
EntrezGene: | RNPEPL1 |
HGNC: | 10079 |
UniProt: | Q9HAU8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nongranular leukocyte | 4.44e-27 | 115 |
monopoietic cell | 1.21e-26 | 59 |
monocyte | 1.21e-26 | 59 |
monoblast | 1.21e-26 | 59 |
promonocyte | 1.21e-26 | 59 |
defensive cell | 1.52e-26 | 48 |
phagocyte | 1.52e-26 | 48 |
myeloid leukocyte | 1.68e-26 | 72 |
leukocyte | 2.87e-26 | 136 |
classical monocyte | 3.18e-25 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.18e-25 | 42 |
macrophage dendritic cell progenitor | 1.40e-24 | 61 |
myeloid lineage restricted progenitor cell | 2.24e-24 | 66 |
hematopoietic lineage restricted progenitor cell | 4.56e-23 | 120 |
granulocyte monocyte progenitor cell | 1.79e-21 | 67 |
hematopoietic cell | 1.40e-20 | 177 |
hematopoietic oligopotent progenitor cell | 7.42e-20 | 161 |
hematopoietic multipotent progenitor cell | 7.42e-20 | 161 |
hematopoietic stem cell | 1.00e-19 | 168 |
myeloid cell | 6.82e-17 | 108 |
common myeloid progenitor | 6.82e-17 | 108 |
mature alpha-beta T cell | 1.90e-10 | 18 |
alpha-beta T cell | 1.90e-10 | 18 |
immature T cell | 1.90e-10 | 18 |
mature T cell | 1.90e-10 | 18 |
immature alpha-beta T cell | 1.90e-10 | 18 |
T cell | 1.52e-07 | 25 |
pro-T cell | 1.52e-07 | 25 |
CD8-positive, alpha-beta T cell | 2.97e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 2.29e-25 | 108 |
hematopoietic system | 3.65e-25 | 98 |
blood island | 3.65e-25 | 98 |
immune system | 8.84e-19 | 93 |
lateral plate mesoderm | 1.65e-18 | 203 |
bone marrow | 4.05e-18 | 76 |
bone element | 1.12e-16 | 82 |
skeletal element | 9.56e-13 | 90 |
skeletal system | 1.83e-10 | 100 |
blood | 3.46e-08 | 15 |
haemolymphatic fluid | 3.46e-08 | 15 |
organism substance | 3.46e-08 | 15 |