FFCP PHASE1:Hg19::chr2:241374742..241374790,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr2:241374742..241374790,+
|short_description=p2@GPC1
|description=CAGE_peak_2_at_GPC1_5end
|association_with_transcript=-297bp_to_ENST00000264039_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2817 | |EntrezGene=2817 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4449 | |HGNC=4449 | ||
|TSSclassifier=strong | |||
|UniProt=P35052 | |UniProt=P35052 | ||
|association_with_transcript=-297bp_to_ENST00000264039_5end | |||
|cluster_id=chr2:241374742..241374790,+ | |||
|description=CAGE_peak_2_at_GPC1_5end | |||
|id=chr2:241374742..241374790,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.20e-23!180;CL:0000183!7.97e-13!59;CL:0000393!2.63e-12!60;CL:0000211!2.63e-12!60;CL:0000680!1.22e-11!57;CL:0000056!1.22e-11!57;CL:0000355!1.22e-11!57;CL:0002321!4.44e-11!248;CL:0000220!4.95e-11!246;CL:0000187!5.11e-11!54;CL:0000192!9.67e-09!42;CL:0000514!9.67e-09!42;CL:0000222!1.56e-08!119;CL:0000057!7.68e-08!75;CL:0000359!3.97e-07!32 | |||
|ontology_enrichment_celltype_v019=CL:0000393;2.98e-07;61!CL:0000211;2.98e-07;61!CL:0000192;3.69e-07;43!CL:0000359;5.09e-07;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000393,1.11e-12,61;CL:0000211,1.11e-12,61;CL:0000680,5.29e-12,58;CL:0000056,5.29e-12,58;CL:0000355,5.29e-12,58;CL:0000187,2.28e-11,55;CL:0002321,3.44e-11,250;CL:0000192,4.74e-09,43;CL:0000514,4.74e-09,43;CL:0000222,6.02e-09,121;CL:0000057,4.33e-08,76;CL:0000359,3.22e-07,32 | |||
|ontology_enrichment_development_v019=CL:0000514;3.69e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0001869;1.99e-09;32!UBERON:0003528;6.20e-09;34!UBERON:0002020;6.20e-09;34!UBERON:0002791;9.31e-09;32!UBERON:0001893;1.78e-08;34!UBERON:0000956;2.84e-08;25!UBERON:0000203;2.84e-08;25!UBERON:0002385;7.44e-08;31!UBERON:0001015;7.44e-08;31!UBERON:0000383;7.44e-08;31!UBERON:0002619;2.48e-07;22!UBERON:0002780;3.83e-07;41!UBERON:0001890;3.83e-07;41!UBERON:0007100;5.07e-07;25!UBERON:0000955;5.87e-07;68!UBERON:0000073;7.55e-07;53!UBERON:0002616;7.55e-07;53 | |||
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| ||
|short_description=p2@GPC1 | |||
}} | }} |
Latest revision as of 07:20, 16 September 2015
Short description: | p2@GPC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_GPC1_5end |
Coexpression cluster: | NA |
Association with transcript: | -297bp_to_ENST00000264039_5end |
EntrezGene: | GPC1 |
HGNC: | 4449 |
UniProt: | P35052 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
electrically responsive cell | 1.11e-12 | 61 |
electrically active cell | 1.11e-12 | 61 |
muscle precursor cell | 5.29e-12 | 58 |
myoblast | 5.29e-12 | 58 |
multi-potent skeletal muscle stem cell | 5.29e-12 | 58 |
muscle cell | 2.28e-11 | 55 |
embryonic cell | 3.44e-11 | 250 |
smooth muscle cell | 4.74e-09 | 43 |
smooth muscle myoblast | 4.74e-09 | 43 |
mesodermal cell | 6.02e-09 | 121 |
fibroblast | 4.33e-08 | 76 |
vascular associated smooth muscle cell | 3.22e-07 | 32 |