FFCP PHASE1:Mm9::chr8:86939247..86939291,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=12286 | |EntrezGene=12286 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=30 | |MCL_coexpression_id=30 | ||
|TSSclassifier=NA | |||
|UniProt=P97445,E9Q1R5,Q3UHA5,Q3UHN4 | |UniProt=P97445,E9Q1R5,Q3UHA5,Q3UHN4 | ||
|association_with_transcript=0bp_to_ENSMUST00000121390,ENSMUST00000122053,NM_001252059,NM_001252060,NM_001252061,NM_007578,uc009mmn.2_5end | |association_with_transcript=0bp_to_ENSMUST00000121390,ENSMUST00000122053,NM_001252059,NM_001252060,NM_001252061,NM_007578,uc009mmn.2_5end | ||
|cluster_id=chr8:86939247..86939291,+ | |||
|description=CAGE_peak_2_at_Cacna1a_5end | |description=CAGE_peak_2_at_Cacna1a_5end | ||
|id=chr8:86939247..86939291,+ | |id=chr8:86939247..86939291,+ | ||
|ontology_enrichment_celltype=CL:0000221!3.35e-12!44;CL:0000133!3.35e-12!44;CL:0000055!4.42e-12!50;CL:0002319!5.68e-12!43;CL:0000117!4.15e-09!23;CL:0000337!4.15e-09!23;CL:0000540!5.50e-09!33;CL:0000047!5.50e-09!33;CL:0000031!5.50e-09!33;CL:0000404!5.50e-09!33;CL:0000393!6.87e-09!39;CL:0000211!6.87e-09!39 | |ontology_enrichment_celltype=CL:0000221!3.35e-12!44;CL:0000133!3.35e-12!44;CL:0000055!4.42e-12!50;CL:0002319!5.68e-12!43;CL:0000117!4.15e-09!23;CL:0000337!4.15e-09!23;CL:0000540!5.50e-09!33;CL:0000047!5.50e-09!33;CL:0000031!5.50e-09!33;CL:0000404!5.50e-09!33;CL:0000393!6.87e-09!39;CL:0000211!6.87e-09!39 | ||
|ontology_enrichment_celltype_v019_2=CL:0000221,8.56e-13,44;CL:0000133,8.56e-13,44;CL:0002319,1.64e-12,43;CL:0000117,5.00e-10,23;CL:0000337,5.00e-10,23;CL:0000393,3.84e-09,39;CL:0000211,3.84e-09,39;CL:0000540,4.59e-09,33;CL:0000047,4.59e-09,33;CL:0000031,4.59e-09,33;CL:0000404,4.59e-09,33 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!6.40e-28!75;UBERON:0001016!6.40e-28!75;UBERON:0001017!1.50e-27!73;UBERON:0005743!1.50e-27!73;UBERON:0004121!1.08e-24!102;UBERON:0000924!1.08e-24!102;UBERON:0006601!1.08e-24!102;UBERON:0000033!1.68e-21!63;UBERON:0001049!2.81e-21!52;UBERON:0005068!2.81e-21!52;UBERON:0006241!2.81e-21!52;UBERON:0007135!2.81e-21!52;UBERON:0002346!3.69e-21!71;UBERON:0003075!3.69e-21!71;UBERON:0007284!3.69e-21!71;UBERON:0000955!4.87e-20!50;UBERON:0006238!4.87e-20!50;UBERON:0002616!2.28e-19!49;UBERON:0003056!2.41e-17!49;UBERON:0003080!1.47e-15!40;UBERON:0002020!1.90e-15!34;UBERON:0002780!7.07e-15!39;UBERON:0001890!7.07e-15!39;UBERON:0006240!7.07e-15!39;UBERON:0002791!1.01e-12!29;UBERON:0003528!1.01e-12!29;UBERON:0001893!1.01e-12!29;UBERON:0002619!2.77e-09!17;UBERON:0000956!4.66e-09!21;UBERON:0001869!4.66e-09!21;UBERON:0000203!4.66e-09!21;UBERON:0007811!9.15e-08!86;UBERON:0000468!1.12e-07!333;UBERON:0004111!4.96e-07!122;UBERON:0000025!5.41e-07!114;UBERON:0000153!6.01e-07!94;UBERON:0002021!9.42e-07!10;UBERON:0000411!9.42e-07!10;UBERON:0001950!9.42e-07!10 | |ontology_enrichment_uberon=UBERON:0000073!6.40e-28!75;UBERON:0001016!6.40e-28!75;UBERON:0001017!1.50e-27!73;UBERON:0005743!1.50e-27!73;UBERON:0004121!1.08e-24!102;UBERON:0000924!1.08e-24!102;UBERON:0006601!1.08e-24!102;UBERON:0000033!1.68e-21!63;UBERON:0001049!2.81e-21!52;UBERON:0005068!2.81e-21!52;UBERON:0006241!2.81e-21!52;UBERON:0007135!2.81e-21!52;UBERON:0002346!3.69e-21!71;UBERON:0003075!3.69e-21!71;UBERON:0007284!3.69e-21!71;UBERON:0000955!4.87e-20!50;UBERON:0006238!4.87e-20!50;UBERON:0002616!2.28e-19!49;UBERON:0003056!2.41e-17!49;UBERON:0003080!1.47e-15!40;UBERON:0002020!1.90e-15!34;UBERON:0002780!7.07e-15!39;UBERON:0001890!7.07e-15!39;UBERON:0006240!7.07e-15!39;UBERON:0002791!1.01e-12!29;UBERON:0003528!1.01e-12!29;UBERON:0001893!1.01e-12!29;UBERON:0002619!2.77e-09!17;UBERON:0000956!4.66e-09!21;UBERON:0001869!4.66e-09!21;UBERON:0000203!4.66e-09!21;UBERON:0007811!9.15e-08!86;UBERON:0000468!1.12e-07!333;UBERON:0004111!4.96e-07!122;UBERON:0000025!5.41e-07!114;UBERON:0000153!6.01e-07!94;UBERON:0002021!9.42e-07!10;UBERON:0000411!9.42e-07!10;UBERON:0001950!9.42e-07!10 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.23e-31,73;UBERON:0001016,3.52e-31,75;UBERON:0004121,4.75e-28,95;UBERON:0000924,4.75e-28,95;UBERON:0006601,4.75e-28,95;UBERON:0002346,3.32e-26,64;UBERON:0003075,3.32e-26,64;UBERON:0007284,3.32e-26,64;UBERON:0000073,3.95e-26,54;UBERON:0001049,7.30e-25,52;UBERON:0005068,7.30e-25,52;UBERON:0006241,7.30e-25,52;UBERON:0007135,7.30e-25,52;UBERON:0010371,7.96e-22,73;UBERON:0000955,2.71e-21,47;UBERON:0006238,2.71e-21,47;UBERON:0002616,1.74e-20,46;UBERON:0003056,3.59e-19,49;UBERON:0002020,8.20e-18,34;UBERON:0003080,2.29e-17,40;UBERON:0002780,1.55e-16,39;UBERON:0001890,1.55e-16,39;UBERON:0006240,1.55e-16,39;UBERON:0010314,7.22e-16,92;UBERON:0003528,1.91e-14,29;UBERON:0002791,1.91e-14,29;UBERON:0001893,1.91e-14,29;UBERON:0002619,3.32e-11,17;UBERON:0000956,6.30e-10,21;UBERON:0001869,6.30e-10,21;UBERON:0000203,6.30e-10,21;UBERON:0003076,3.69e-08,12;UBERON:0003057,3.69e-08,12;UBERON:0002021,4.74e-08,10;UBERON:0000411,4.74e-08,10;UBERON:0001950,4.74e-08,10 | |||
|phase1_expression=0.640595388419176,0,0.454999239389536,0,0,1.00727563147134,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,6.88850650223665,0,0,0.639969691173627,0.45881856213434,0,0,0,0,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,3.39921408534059,3.95370031756107,1.28482726513177,0,10.247182349881,12.3024262331304,9.91592485278845,7.41928034614421,7.18762821824858,0,0,0,0.514518872071894,1.43266719969378,0,6.67644320836673,3.1739458756322,4.43681982454325,3.72728985276045,1.77858959222228,15.2982951937838,24.7216590641744,15.6305625288142,18.5752068521411,10.7581125490035,0.725827286159344,1.21505344498522,0.630974884054146,12.5686433137674,11.7060326704355,2.81728838194394,1.53352753629178,1.83843757322004,8.8092704799511,11.1087984134113,7.37311359629969,4.87979264601717,5.58074625974699,4.68822033501084,13.1216009530649,3.37657566019008,7.94550888439413,8.83885756421003,7.40332740155335,9.13357284543973,0.832988126665025,4.08086424576642,0.579728977403356,1.72084775396277,0,0,0,0,1.12355536105401,0,0,0,1.83096445709685,0,0,0,0,0,0,1.48439043634778,0.517875767294343,0.742210695324124,1.04091196059682,0.913396434936424,0.230615497256059,0.452167921657868,0.587943535678524,0.502666365318702,0,2.16899035379867,0,0.647067399789637,0.441683036920787,1.45462575940567,0,79.3435959901293,120.850749831364,0,0,0,0,22.9179678289379,10.0650132620098,6.15706325353036,11.6462294528825,12.5300574091862,15.1685272528479,14.7639549391659,0.509196819251581,1.24406970610093,0.505445516867349,2.31486041475121,0.650602214813519,1.37941262660084,1.26043490863744,2.56198190320716,1.97305847538851,2.17793324484245,2.52994656311268,3.88055056108524,0,0.378212160335639,0.351902248327898,1.09597866213787,1.66828349535359,0.348252166522167,0.823128545631774,1.39323986772945,0,0,0,1.03562886267751,0.234526059981096,0.180062061461015,0,0.983821158737019,0.617068451549513,0.697601834251224,0.536546802799238,0.583826711835847,0.658239399653922,0.656669856316381,1.21603214318784,1.90059983652932,1.09775057645525,1.61047702512446,10.7247873767705,5.76265829323993,0.660837565967596,0.528901133327089,0.426576501070468,0.928946687441754,0.644337306610467,0.80673409849337,0,0.570676878337677,1.42358718463353,0.823494773620054,0.502670417600539,0.596869416123452,1.16978452271472,1.79763881730844,0.432276099749388,0.199141273254367,0.379335801906163,0.685491075658373,1.1270773567308,0.407302655690628,0,0.631222379012867,0.758838445491087,1.18088118383682,0.941992367048249,0.863780147452604,0,0.166845105716094,0,0.224862112384854,0,0,0,0,0.162135226775035,0.274561413188081,0,0.372140947668503,0.312037673114561,0.505157755894224,0.358794827043824,0,0.923765950833023,0.37898282354097,0.651859905768103,0.169745085775188,0.469380496577004,0.502518772325447,0.476087281772027,0.390267295715598,0.315270288212382,0.44292937929755,0.797273843287435,0.163863314715738,0.518054945597687,0.723245292907558,36.1899081454253,17.9488875660174,0,0,11.2385412991454,14.5342491374332,0,0.757412781613119,1.26203287766503,0.780877488593277,1.29254038639679,0,2.45078541490634,2.54768877709949,0.809621403349789,3.21481443702443,2.37172666767914,14.1381379225595,1.13552068166615,0,0.977321756121456,1.64970122972535,1.32745138339963,0,0.906970670894253,0.377210159511796,0.295301892880773,0.307435147943927,0.516856586336442,0.363533729477506,1.78248689192361,1.26414703174326,2.10837217149998,1.03135543248187,2.04263763452273,2.34079422240703,1.68166288917581,1.07168517515796,0.886701168211368,1.24858172321449,1.64549020602121,2.43571959291679,0,0,0.661585194164886,1.6488625294148,0.322928853391811,0.361877549568935,0.477489376012546,0.820704498725306,1.1659233465194,13.7214723487777,0.170870880797853,0,0,0,0.27338845544205,0,0,0,0,0,0.158167996790568,1.01659733563424,0.756037385752609,0.627264888043406,0.436725127492355,0.539457385539283,0.41326727862668,0.523511883968059,0.648074866458964,0.621339313086926,0,0.149516546043979,0.330916980914195,0.777804753376191,0.516639293910924,1.18269287843545,0.469428954583016,0.651021924219751,0.419437377702843,0.241584120826006,0.576060012515731,0.316011120628178,0.202725215290164,0,0.129920822977795,0,0,0.120195449519969,0.147689527174577,0,0.15241361331,0,0,0.0962118416403295,0.116876902181569,0.906921534460845,0.443971906748129,1.34570784914214,0.503653849092235,0.386379188064381,0.375364950902364,0.183151624267265,0.214368379079066,2.50786052017682,12.4245405375755,11.0478056761722,10.3121192419091,10.998603669996,8.22099023724771,8.3093328712867,9.45031500324528,9.45674526770863,9.9691329976525,15.0150490408028,0.415149390336707,3.19219898720825,1.70733605754134,3.64660075602441,1.04806581313991,1.47074806760011,1.55572709461131,3.09052585858341,2.56735367673452,0.758091635291392,2.5347929989024,0.943131706930381,0.842773567228942,2.24088033417042,1.78049953762401,2.38146845641537,2.0859178670074,1.35036454324594,1.23625770240992,1.61918812147837,2.05721551431249,1.4198064492747,2.62279808942053,1.30811774969096,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| ||
|short_description=p2@Cacna1a | |short_description=p2@Cacna1a | ||
}} | }} |
Latest revision as of 21:24, 25 September 2015
Short description: | p2@Cacna1a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Cacna1a_5end |
Coexpression cluster: | MCL_coexpression_mm9:30 |
Association with transcript: | 0bp_to_ENSMUST00000121390, ENSMUST00000122053, NM_001252059, NM_001252060, NM_001252061, NM_007578, uc009mmn.2_5end |
EntrezGene: | Cacna1a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 8.56e-13 | 44 |
neurectodermal cell | 8.56e-13 | 44 |
neural cell | 1.64e-12 | 43 |
CNS neuron (sensu Vertebrata) | 5.00e-10 | 23 |
neuroblast (sensu Vertebrata) | 5.00e-10 | 23 |
electrically responsive cell | 3.84e-09 | 39 |
electrically active cell | 3.84e-09 | 39 |
neuron | 4.59e-09 | 33 |
neuronal stem cell | 4.59e-09 | 33 |
neuroblast | 4.59e-09 | 33 |
electrically signaling cell | 4.59e-09 | 33 |