FFCP PHASE1:Hg19::chr2:239047337..239047362,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:239047337..239047362,+
|short_description=p2@KLHL30
|description=CAGE_peak_2_at_KLHL30_5end
|association_with_transcript=0bp_to_ENST00000305959,ENST0000040...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=377007 | |EntrezGene=377007 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24770 | |HGNC=24770 | ||
|TSSclassifier=strong | |||
|UniProt=Q0D2K2 | |UniProt=Q0D2K2 | ||
|association_with_transcript=0bp_to_ENST00000305959,ENST00000409223,NM_198582_5end | |||
|cluster_id=chr2:239047337..239047362,+ | |||
|coexpression_cluster_id=C72 | |||
|description=CAGE_peak_2_at_KLHL30_5end | |||
|id=chr2:239047337..239047362,+ | |||
|ontology_enrichment_celltype=CL:0000188!1.46e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000515;2.45e-11;3!CL:0000056;1.30e-08;4!CL:0000680;3.03e-08;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000515,1.36e-08,4 | |||
|ontology_enrichment_development_v019=UBERON:0005062;9.44e-09;4!UBERON:0007284;9.44e-09;4!CL:0000515;1.30e-08;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:114;2.60e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:114,3.02e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!8.91e-14!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0001134;1.52e-21;16!UBERON:0002036;1.52e-21;16!UBERON:0004151;3.51e-12;3!UBERON:0003978;1.59e-11;3!UBERON:0000946;1.59e-11;3!UBERON:0007100;1.75e-10;25!UBERON:0002385;6.29e-10;31!UBERON:0001015;6.29e-10;31!UBERON:0000383;6.29e-10;31!UBERON:0005090;4.87e-09;2!UBERON:0001630;4.87e-09;2!UBERON:0000341;7.42e-09;2!UBERON:0002081;1.39e-08;2!UBERON:0002133;5.02e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004151,2.86e-12,3;UBERON:0003978,1.01e-11,3;UBERON:0009751,1.01e-11,3;UBERON:0000946,1.01e-11,3;UBERON:0002523,1.01e-11,3;UBERON:0005983,1.01e-11,3;UBERON:0002165,1.01e-11,3;UBERON:0002062,1.01e-11,3;UBERON:0007280,1.01e-11,3;UBERON:0007100,1.26e-09,27;UBERON:0005090,5.16e-09,2;UBERON:0001630,5.16e-09,2;UBERON:0000341,7.87e-09,2;UBERON:0003103,1.06e-08,68;UBERON:0002081,1.15e-08,2;UBERON:0010227,1.15e-08,2;UBERON:0002133,3.25e-08,2;UBERON:0007023,2.90e-07,114 | |||
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| ||
|short_description=p2@KLHL30 | |||
}} | }} |
Latest revision as of 05:30, 16 September 2015
Short description: | p2@KLHL30 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_KLHL30_5end |
Coexpression cluster: | C72_skeletal_tongue_throat_heart_diaphragm_penis_left |
Association with transcript: | 0bp_to_ENST00000305959, ENST00000409223, NM_198582_5end |
EntrezGene: | KLHL30 |
HGNC: | 24770 |
UniProt: | Q0D2K2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skeletal muscle myoblast | 1.36e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
cardiac chamber | 2.86e-12 | 3 |
valve | 1.01e-11 | 3 |
cardiac mesenchyme | 1.01e-11 | 3 |
cardial valve | 1.01e-11 | 3 |
tunica intima | 1.01e-11 | 3 |
heart layer | 1.01e-11 | 3 |
endocardium | 1.01e-11 | 3 |
endocardial cushion | 1.01e-11 | 3 |
presumptive endocardium | 1.01e-11 | 3 |
primary circulatory organ | 1.26e-09 | 27 |
muscle structure | 5.16e-09 | 2 |
muscle organ | 5.16e-09 | 2 |
throat | 7.87e-09 | 2 |
compound organ | 1.06e-08 | 68 |
cardiac atrium | 1.15e-08 | 2 |
future cardiac atrium | 1.15e-08 | 2 |
atrioventricular valve | 3.25e-08 | 2 |
adult organism | 2.90e-07 | 114 |
Ontology term | p-value | n |
---|---|---|
heart disease | 3.02e-08 | 2 |