FFCP PHASE1:Hg19::chr2:238877479..238877500,+: Difference between revisions
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|id=chr2:238877479..238877500,+
|short_description=p3@UBE2F
|description=CAGE_peak_3_at_UBE2F_5end
|association_with_transcript=44bp_to_ENST00000434655_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=140739 | |EntrezGene=140739 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12480 | |HGNC=12480 | ||
|TSSclassifier=strong | |||
|UniProt=C9J9P8 | |UniProt=C9J9P8 | ||
|association_with_transcript=44bp_to_ENST00000434655_5end | |||
|cluster_id=chr2:238877479..238877500,+ | |||
|description=CAGE_peak_3_at_UBE2F_5end | |||
|id=chr2:238877479..238877500,+ | |||
|ontology_enrichment_celltype=CL:0000763!8.21e-26!112;CL:0000049!8.21e-26!112;CL:0002032!5.94e-24!165;CL:0000837!5.94e-24!165;CL:0000037!3.66e-23!172;CL:0000566!3.66e-23!172;CL:0000988!8.00e-21!182;CL:0000839!2.35e-20!70;CL:0000557!1.35e-18!71;CL:0002031!2.84e-18!124;CL:0000766!6.02e-18!76;CL:0000738!1.14e-17!140;CL:0002009!2.10e-14!65;CL:0002194!8.03e-14!63;CL:0000576!8.03e-14!63;CL:0000040!8.03e-14!63;CL:0000559!8.03e-14!63;CL:0002087!9.59e-12!119;CL:0000990!7.80e-10!8;CL:0002274!1.60e-08!5;CL:0000457!1.60e-08!5;CL:0002191!1.60e-08!5;CL:0000097!1.60e-08!5;CL:0000831!1.60e-08!5;CL:0002028!1.60e-08!5;CL:0000451!9.43e-08!10;CL:0002057!3.23e-07!42 | |||
|ontology_enrichment_celltype_v019=CL:0000990;6.85e-39;8!CL:0000451;1.08e-31;10!CL:0000453;9.79e-24;5!CL:0000840;2.25e-19;5!CL:0000473;4.80e-13;39!CL:0000234;4.80e-13;39!CL:0000860;1.86e-11;33!CL:0002057;1.86e-11;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000990,5.48e-39,8;CL:0000451,9.01e-32,10;CL:0000763,3.16e-25,108;CL:0000049,3.16e-25,108;CL:0000453,1.07e-23,5;CL:0002009,4.86e-20,61;CL:0000840,1.77e-19,5;CL:0001029,1.77e-19,5;CL:0002032,2.04e-19,161;CL:0000837,2.04e-19,161;CL:0000037,1.94e-18,168;CL:0000557,4.87e-18,67;CL:0002194,7.37e-18,59;CL:0000576,7.37e-18,59;CL:0000040,7.37e-18,59;CL:0000559,7.37e-18,59;CL:0000988,2.71e-17,177;CL:0000839,9.69e-16,66;CL:0000738,1.92e-15,136;CL:0000766,3.01e-14,72;CL:0000473,2.65e-13,48;CL:0000234,2.65e-13,48;CL:0002031,3.84e-12,120;CL:0002087,4.06e-11,115;CL:0000860,6.53e-10,42;CL:0002057,6.53e-10,42 | |||
|ontology_enrichment_development_v019=CL:0002057;1.32e-08;42!CL:0000049;6.42e-08;108 | |||
|ontology_enrichment_disease=DOID:1240!8.54e-07!39 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.69e-17!80;UBERON:0002390!5.46e-16!102;UBERON:0003061!5.46e-16!102;UBERON:0001474!1.64e-15!86;UBERON:0002193!2.29e-14!112;UBERON:0002405!1.58e-13!115;UBERON:0004765!1.23e-11!101;UBERON:0001434!1.23e-11!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.27e-15,76;UBERON:0001474,2.66e-14,82;UBERON:0004765,8.22e-13,90;UBERON:0002405,2.56e-12,93;UBERON:0002390,1.46e-11,98;UBERON:0003061,1.46e-11,98;UBERON:0001434,2.78e-11,100;UBERON:0002193,2.92e-10,108 | |||
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| ||
|short_description=p3@UBE2F | |||
}} | }} |
Latest revision as of 05:21, 16 September 2015
Short description: | p3@UBE2F |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_UBE2F_5end |
Coexpression cluster: | NA |
Association with transcript: | 44bp_to_ENST00000434655_5end |
EntrezGene: | UBE2F |
HGNC: | 12480 |
UniProt: | C9J9P8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
conventional dendritic cell | 5.48e-39 | 8 |
dendritic cell | 9.01e-32 | 10 |
myeloid cell | 3.16e-25 | 108 |
common myeloid progenitor | 3.16e-25 | 108 |
Langerhans cell | 1.07e-23 | 5 |
macrophage dendritic cell progenitor | 4.86e-20 | 61 |
immature conventional dendritic cell | 1.77e-19 | 5 |
common dendritic progenitor | 1.77e-19 | 5 |
hematopoietic oligopotent progenitor cell | 2.04e-19 | 161 |
hematopoietic multipotent progenitor cell | 2.04e-19 | 161 |
hematopoietic stem cell | 1.94e-18 | 168 |
granulocyte monocyte progenitor cell | 4.87e-18 | 67 |
monopoietic cell | 7.37e-18 | 59 |
monocyte | 7.37e-18 | 59 |
monoblast | 7.37e-18 | 59 |
promonocyte | 7.37e-18 | 59 |
hematopoietic cell | 2.71e-17 | 177 |
myeloid lineage restricted progenitor cell | 9.69e-16 | 66 |
leukocyte | 1.92e-15 | 136 |
myeloid leukocyte | 3.01e-14 | 72 |
defensive cell | 2.65e-13 | 48 |
phagocyte | 2.65e-13 | 48 |
hematopoietic lineage restricted progenitor cell | 3.84e-12 | 120 |
nongranular leukocyte | 4.06e-11 | 115 |
classical monocyte | 6.53e-10 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.53e-10 | 42 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.27e-15 | 76 |
bone element | 2.66e-14 | 82 |
skeletal element | 8.22e-13 | 90 |
immune system | 2.56e-12 | 93 |
hematopoietic system | 1.46e-11 | 98 |
blood island | 1.46e-11 | 98 |
skeletal system | 2.78e-11 | 100 |
hemolymphoid system | 2.92e-10 | 108 |