FFCP PHASE1:Mm9::chr7:149620677..149620694,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=55925 | |EntrezGene=55925 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1339 | |MCL_coexpression_id=1339 | ||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-60bp_to_ENSMUST00000150192_5end | |association_with_transcript=-60bp_to_ENSMUST00000150192_5end | ||
|cluster_id=chr7:149620677..149620694,+ | |||
|description=CAGE_peak_4_at_Syt8_5end | |description=CAGE_peak_4_at_Syt8_5end | ||
|id=chr7:149620677..149620694,+ | |id=chr7:149620677..149620694,+ | ||
|ontology_enrichment_celltype=CL:0000068!5.79e-07!3;CL:0002202!5.79e-07!3;CL:0000069!5.79e-07!3;CL:0002632!5.79e-07!3;CL:0002368!5.79e-07!3;CL:0000307!5.79e-07!3;CL:0000377!5.79e-07!3 | |ontology_enrichment_celltype=CL:0000068!5.79e-07!3;CL:0002202!5.79e-07!3;CL:0000069!5.79e-07!3;CL:0002632!5.79e-07!3;CL:0002368!5.79e-07!3;CL:0000307!5.79e-07!3;CL:0000377!5.79e-07!3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000068,1.52e-21,3;CL:0002202,1.52e-21,3;CL:0000069,1.52e-21,3;CL:0002632,1.52e-21,3;CL:0002368,1.52e-21,3;CL:0000307,1.52e-21,3;CL:0000377,1.52e-21,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000014!3.35e-09!5;UBERON:0001003!3.35e-09!5;UBERON:0002097!3.35e-09!5;UBERON:0002199!3.35e-09!5;UBERON:0007029!3.35e-09!5;UBERON:0007376!3.35e-09!5;UBERON:0002416!3.35e-09!5;UBERON:0007383!3.35e-09!5;UBERON:0003102!9.52e-09!23;UBERON:0003126!5.79e-07!3;UBERON:0001005!5.79e-07!3;UBERON:0007196!5.79e-07!3;UBERON:0001558!5.79e-07!3 | |ontology_enrichment_uberon=UBERON:0000014!3.35e-09!5;UBERON:0001003!3.35e-09!5;UBERON:0002097!3.35e-09!5;UBERON:0002199!3.35e-09!5;UBERON:0007029!3.35e-09!5;UBERON:0007376!3.35e-09!5;UBERON:0002416!3.35e-09!5;UBERON:0007383!3.35e-09!5;UBERON:0003102!9.52e-09!23;UBERON:0003126!5.79e-07!3;UBERON:0001005!5.79e-07!3;UBERON:0007196!5.79e-07!3;UBERON:0001558!5.79e-07!3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003126,1.52e-21,3;UBERON:0001005,1.52e-21,3;UBERON:0007196,1.52e-21,3;UBERON:0001558,1.52e-21,3;UBERON:0000162,1.95e-10,3;UBERON:0001353,1.95e-10,3;UBERON:0000163,1.95e-10,3;UBERON:0006866,1.95e-10,3;UBERON:0001046,1.95e-10,3;UBERON:0000164,1.95e-10,3;UBERON:0000931,1.95e-10,3;UBERON:0001255,1.56e-08,1;UBERON:0001556,1.56e-08,1;UBERON:0000996,2.54e-08,1;UBERON:0000305,5.62e-08,1;UBERON:0000945,7.57e-07,16;UBERON:0010039,7.57e-07,16 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279972843250725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.89683873820185,4.30711771307668,2.02209778005913,0,0,0,0,0,0,0,0,0,1.97755974187499,0,0,0.161766849947409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0.631325567659422,0,0,0,0.30140963567143,0,0.12811372028485,0,1.55222022443409,0,0,0,0,0.278047249225598,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0.164167464079095,0,0,0,0,0,0,0,0,0,0,0.257734922644187,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0.387904974335251,0.280543279561274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335012514883631,0,0,0,0,0,0.327726629431476,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42366414172764,0.220528398054962,0.49465875882444,0.322928853391811,0.301564624640779,0.358117032009409,2.1338316966858,0,0,0,0,0,0,0,0,0,0,0.138199973804424,0,0,0.203319467126849,1.40406943068342,1.67270636811575,1.52853794622324,0.809186078308924,0.909188012978695,2.09404753587224,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.453460767230423,0.221985953374065,0,0.335769232728157,11.3981860478992,0,2.19781949120718,2.57242054894879,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0,0.209613162627982,0,0,0,0,0.252697211763798,0.25347929989024,0.188626341386076,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0.188218760830661,0.0846146078916765,0,0,0,0,0,0.0985044823755635,0,0,0.192906610981141,0,0,0,0,0.220591419119515,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279972843250725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.89683873820185,4.30711771307668,2.02209778005913,0,0,0,0,0,0,0,0,0,1.97755974187499,0,0,0.161766849947409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0.631325567659422,0,0,0,0.30140963567143,0,0.12811372028485,0,1.55222022443409,0,0,0,0,0.278047249225598,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0.164167464079095,0,0,0,0,0,0,0,0,0,0,0.257734922644187,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0.387904974335251,0.280543279561274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335012514883631,0,0,0,0,0,0.327726629431476,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42366414172764,0.220528398054962,0.49465875882444,0.322928853391811,0.301564624640779,0.358117032009409,2.1338316966858,0,0,0,0,0,0,0,0,0,0,0.138199973804424,0,0,0.203319467126849,1.40406943068342,1.67270636811575,1.52853794622324,0.809186078308924,0.909188012978695,2.09404753587224,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.453460767230423,0.221985953374065,0,0.335769232728157,11.3981860478992,0,2.19781949120718,2.57242054894879,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0,0.209613162627982,0,0,0,0,0.252697211763798,0.25347929989024,0.188626341386076,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0.188218760830661,0.0846146078916765,0,0,0,0,0,0.0985044823755635,0,0,0.192906610981141,0,0,0,0,0.220591419119515,0 | ||
|short_description=p4@Syt8 | |short_description=p4@Syt8 | ||
}} | }} |
Latest revision as of 05:09, 26 September 2015
Short description: | p4@Syt8 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Syt8_5end |
Coexpression cluster: | MCL_coexpression_mm9:1339 |
Association with transcript: | -60bp_to_ENSMUST00000150192_5end |
EntrezGene: | Syt8 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 1.52e-21 | 3 |
epithelial cell of tracheobronchial tree | 1.52e-21 | 3 |
branched duct epithelial cell | 1.52e-21 | 3 |
epithelial cell of lower respiratory tract | 1.52e-21 | 3 |
respiratory epithelial cell | 1.52e-21 | 3 |
tracheal epithelial cell | 1.52e-21 | 3 |
tracheoblast | 1.52e-21 | 3 |
Ontology term | p-value | n |
---|---|---|
trachea | 1.52e-21 | 3 |
respiratory airway | 1.52e-21 | 3 |
tracheobronchial tree | 1.52e-21 | 3 |
lower respiratory tract | 1.52e-21 | 3 |
cloaca | 1.95e-10 | 3 |
anal region | 1.95e-10 | 3 |
embryonic cloaca | 1.95e-10 | 3 |
terminal part of digestive tract | 1.95e-10 | 3 |
hindgut | 1.95e-10 | 3 |
primitive urogenital sinus | 1.95e-10 | 3 |
proctodeum | 1.95e-10 | 3 |
urinary bladder | 1.56e-08 | 1 |
lower urinary tract | 1.56e-08 | 1 |
vagina | 2.54e-08 | 1 |
amnion | 5.62e-08 | 1 |
stomach | 7.57e-07 | 16 |
food storage organ | 7.57e-07 | 16 |