FFCP PHASE1:Mm9::chr11:86400172..86400191,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=75909 | |EntrezGene=75909 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1093 | |MCL_coexpression_id=1093 | ||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=191bp_to_ENSMUST00000150176_5end | |association_with_transcript=191bp_to_ENSMUST00000150176_5end | ||
|cluster_id=chr11:86400172..86400191,- | |||
|description=CAGE_peak_3_at_Vmp1_5end | |description=CAGE_peak_3_at_Vmp1_5end | ||
|id=chr11:86400172..86400191,- | |id=chr11:86400172..86400191,- | ||
|ontology_enrichment_celltype=CL:0000063!8.91e-16!66;CL:0000219!2.58e-13!54;CL:0002320!1.24e-10!46;CL:0000134!1.24e-10!46;CL:0000144!4.89e-09!121;CL:0000012!4.89e-09!121;CL:0000223!2.65e-08!20;CL:0000066!2.77e-08!25;CL:0002371!7.49e-08!118;CL:0000548!1.60e-07!115;CL:0000004!1.60e-07!115;CL:0000255!1.60e-07!115 | |ontology_enrichment_celltype=CL:0000063!8.91e-16!66;CL:0000219!2.58e-13!54;CL:0002320!1.24e-10!46;CL:0000134!1.24e-10!46;CL:0000144!4.89e-09!121;CL:0000012!4.89e-09!121;CL:0000223!2.65e-08!20;CL:0000066!2.77e-08!25;CL:0002371!7.49e-08!118;CL:0000548!1.60e-07!115;CL:0000004!1.60e-07!115;CL:0000255!1.60e-07!115 | ||
|ontology_enrichment_celltype_v019_2=CL:0000219,2.38e-13,54;CL:0002320,1.19e-10,46;CL:0000134,1.19e-10,46;CL:0000223,2.32e-08,20;CL:0000066,2.43e-08,25 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!1.24e-10!46;UBERON:0004119!3.05e-10!130;UBERON:0000925!3.05e-10!130;UBERON:0006595!3.05e-10!130;UBERON:0001007!9.69e-10!128;UBERON:0001555!9.69e-10!128;UBERON:0007026!9.69e-10!128;UBERON:0004921!5.01e-09!126;UBERON:0004185!5.01e-09!126;UBERON:0005256!2.06e-07!47;UBERON:0000926!9.25e-07!193;UBERON:0004120!9.25e-07!193;UBERON:0006603!9.25e-07!193 | |ontology_enrichment_uberon=UBERON:0002384!1.24e-10!46;UBERON:0004119!3.05e-10!130;UBERON:0000925!3.05e-10!130;UBERON:0006595!3.05e-10!130;UBERON:0001007!9.69e-10!128;UBERON:0001555!9.69e-10!128;UBERON:0007026!9.69e-10!128;UBERON:0004921!5.01e-09!126;UBERON:0004185!5.01e-09!126;UBERON:0005256!2.06e-07!47;UBERON:0000926!9.25e-07!193;UBERON:0004120!9.25e-07!193;UBERON:0006603!9.25e-07!193 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,3.68e-11,118;UBERON:0000925,3.68e-11,118;UBERON:0006595,3.68e-11,118;UBERON:0002384,1.19e-10,46;UBERON:0001007,1.23e-10,116;UBERON:0001555,1.23e-10,116;UBERON:0007026,1.23e-10,116;UBERON:0004921,7.03e-10,114;UBERON:0005256,7.32e-08,45 | |||
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| ||
|short_description=p3@Vmp1 | |short_description=p3@Vmp1 | ||
}} | }} |
Latest revision as of 21:36, 25 September 2015
Short description: | p3@Vmp1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Vmp1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1093 |
Association with transcript: | 191bp_to_ENSMUST00000150176_5end |
EntrezGene: | Vmp1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
motile cell | 2.38e-13 | 54 |
connective tissue cell | 1.19e-10 | 46 |
mesenchymal cell | 1.19e-10 | 46 |
endodermal cell | 2.32e-08 | 20 |
epithelial cell | 2.43e-08 | 25 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 3.68e-11 | 118 |
endoderm | 3.68e-11 | 118 |
presumptive endoderm | 3.68e-11 | 118 |
connective tissue | 1.19e-10 | 46 |
digestive system | 1.23e-10 | 116 |
digestive tract | 1.23e-10 | 116 |
primitive gut | 1.23e-10 | 116 |
subdivision of digestive tract | 7.03e-10 | 114 |
trunk mesenchyme | 7.32e-08 | 45 |