FFCP PHASE1:Mm9::chrX:160347064..160347101,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=108012 | |EntrezGene=108012 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=9 | |MCL_coexpression_id=9 | ||
|TSSclassifier=NA | |||
|UniProt=Q3TIV9,Q8BW87,Q9DB50 | |UniProt=Q3TIV9,Q8BW87,Q9DB50 | ||
|association_with_transcript=0bp_to_ENSMUST00000033734,ENSMUST00000112294,NM_026887,uc009uuw.1,uc009uux.1,uc009uuy.1_5end | |association_with_transcript=0bp_to_ENSMUST00000033734,ENSMUST00000112294,NM_026887,uc009uuw.1,uc009uux.1,uc009uuy.1_5end | ||
|cluster_id=chrX:160347064..160347101,+ | |||
|description=CAGE_peak_1_at_Ap1s2_5end | |description=CAGE_peak_1_at_Ap1s2_5end | ||
|id=chrX:160347064..160347101,+ | |id=chrX:160347064..160347101,+ | ||
|ontology_enrichment_celltype=CL:0000393!1.85e-13!39;CL:0000211!1.85e-13!39;CL:0000540!2.05e-12!33;CL:0000047!2.05e-12!33;CL:0000031!2.05e-12!33;CL:0000404!2.05e-12!33;CL:0000055!6.64e-12!50;CL:0002319!1.72e-11!43;CL:0000221!2.67e-11!44;CL:0000133!2.67e-11!44;CL:0000117!1.31e-10!23;CL:0000337!1.31e-10!23 | |ontology_enrichment_celltype=CL:0000393!1.85e-13!39;CL:0000211!1.85e-13!39;CL:0000540!2.05e-12!33;CL:0000047!2.05e-12!33;CL:0000031!2.05e-12!33;CL:0000404!2.05e-12!33;CL:0000055!6.64e-12!50;CL:0002319!1.72e-11!43;CL:0000221!2.67e-11!44;CL:0000133!2.67e-11!44;CL:0000117!1.31e-10!23;CL:0000337!1.31e-10!23 | ||
|ontology_enrichment_celltype_v019_2=CL:0000393,1.85e-13,39;CL:0000211,1.85e-13,39;CL:0000540,2.05e-12,33;CL:0000047,2.05e-12,33;CL:0000031,2.05e-12,33;CL:0000404,2.05e-12,33;CL:0002319,1.72e-11,43;CL:0000221,2.67e-11,44;CL:0000133,2.67e-11,44;CL:0000117,1.31e-10,23;CL:0000337,1.31e-10,23 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!6.73e-17!75;UBERON:0001016!6.73e-17!75;UBERON:0001017!5.90e-16!73;UBERON:0005743!5.90e-16!73;UBERON:0004121!1.28e-14!102;UBERON:0000924!1.28e-14!102;UBERON:0006601!1.28e-14!102;UBERON:0002346!2.76e-12!71;UBERON:0003075!2.76e-12!71;UBERON:0007284!2.76e-12!71;UBERON:0001049!3.15e-12!52;UBERON:0005068!3.15e-12!52;UBERON:0006241!3.15e-12!52;UBERON:0007135!3.15e-12!52;UBERON:0000033!1.02e-11!63;UBERON:0000955!3.51e-11!50;UBERON:0006238!3.51e-11!50;UBERON:0002616!1.21e-10!49;UBERON:0003056!3.43e-09!49;UBERON:0002020!1.08e-08!34;UBERON:0003080!1.97e-08!40;UBERON:0002780!5.96e-08!39;UBERON:0001890!5.96e-08!39;UBERON:0006240!5.96e-08!39 | |ontology_enrichment_uberon=UBERON:0000073!6.73e-17!75;UBERON:0001016!6.73e-17!75;UBERON:0001017!5.90e-16!73;UBERON:0005743!5.90e-16!73;UBERON:0004121!1.28e-14!102;UBERON:0000924!1.28e-14!102;UBERON:0006601!1.28e-14!102;UBERON:0002346!2.76e-12!71;UBERON:0003075!2.76e-12!71;UBERON:0007284!2.76e-12!71;UBERON:0001049!3.15e-12!52;UBERON:0005068!3.15e-12!52;UBERON:0006241!3.15e-12!52;UBERON:0007135!3.15e-12!52;UBERON:0000033!1.02e-11!63;UBERON:0000955!3.51e-11!50;UBERON:0006238!3.51e-11!50;UBERON:0002616!1.21e-10!49;UBERON:0003056!3.43e-09!49;UBERON:0002020!1.08e-08!34;UBERON:0003080!1.97e-08!40;UBERON:0002780!5.96e-08!39;UBERON:0001890!5.96e-08!39;UBERON:0006240!5.96e-08!39 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,6.73e-17,75;UBERON:0004121,3.58e-16,95;UBERON:0000924,3.58e-16,95;UBERON:0006601,3.58e-16,95;UBERON:0001017,5.90e-16,73;UBERON:0002346,3.43e-14,64;UBERON:0003075,3.43e-14,64;UBERON:0007284,3.43e-14,64;UBERON:0000073,5.81e-13,54;UBERON:0010314,7.22e-13,92;UBERON:0001049,3.15e-12,52;UBERON:0005068,3.15e-12,52;UBERON:0006241,3.15e-12,52;UBERON:0007135,3.15e-12,52;UBERON:0010371,8.26e-12,73;UBERON:0000955,5.60e-10,47;UBERON:0006238,5.60e-10,47;UBERON:0002616,1.85e-09,46;UBERON:0003056,3.43e-09,49;UBERON:0002020,1.08e-08,34;UBERON:0003080,1.97e-08,40;UBERON:0002780,5.96e-08,39;UBERON:0001890,5.96e-08,39;UBERON:0006240,5.96e-08,39 | |||
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| ||
|short_description=p1@Ap1s2 | |short_description=p1@Ap1s2 | ||
}} | }} |
Latest revision as of 18:02, 1 October 2015
Short description: | p1@Ap1s2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Ap1s2_5end |
Coexpression cluster: | MCL_coexpression_mm9:9 |
Association with transcript: | 0bp_to_ENSMUST00000033734, ENSMUST00000112294, NM_026887, uc009uuw.1, uc009uux.1, uc009uuy.1_5end |
EntrezGene: | Ap1s2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
electrically responsive cell | 1.85e-13 | 39 |
electrically active cell | 1.85e-13 | 39 |
neuron | 2.05e-12 | 33 |
neuronal stem cell | 2.05e-12 | 33 |
neuroblast | 2.05e-12 | 33 |
electrically signaling cell | 2.05e-12 | 33 |
neural cell | 1.72e-11 | 43 |
ectodermal cell | 2.67e-11 | 44 |
neurectodermal cell | 2.67e-11 | 44 |
CNS neuron (sensu Vertebrata) | 1.31e-10 | 23 |
neuroblast (sensu Vertebrata) | 1.31e-10 | 23 |
Ontology term | p-value | n |
---|---|---|
nervous system | 6.73e-17 | 75 |
ectoderm-derived structure | 3.58e-16 | 95 |
ectoderm | 3.58e-16 | 95 |
presumptive ectoderm | 3.58e-16 | 95 |
central nervous system | 5.90e-16 | 73 |
neurectoderm | 3.43e-14 | 64 |
neural plate | 3.43e-14 | 64 |
presumptive neural plate | 3.43e-14 | 64 |
regional part of nervous system | 5.81e-13 | 54 |
structure with developmental contribution from neural crest | 7.22e-13 | 92 |
neural tube | 3.15e-12 | 52 |
neural rod | 3.15e-12 | 52 |
future spinal cord | 3.15e-12 | 52 |
neural keel | 3.15e-12 | 52 |
ecto-epithelium | 8.26e-12 | 73 |
brain | 5.60e-10 | 47 |
future brain | 5.60e-10 | 47 |
regional part of brain | 1.85e-09 | 46 |
pre-chordal neural plate | 3.43e-09 | 49 |
gray matter | 1.08e-08 | 34 |
anterior neural tube | 1.97e-08 | 40 |
regional part of forebrain | 5.96e-08 | 39 |
forebrain | 5.96e-08 | 39 |
future forebrain | 5.96e-08 | 39 |