FFCP PHASE1:Mm9::chr6:113647068..113647153,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=381801 | |EntrezGene=381801 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1919 | |MCL_coexpression_id=1919 | ||
|TSSclassifier=NA | |||
|UniProt=F8VQE6 | |UniProt=F8VQE6 | ||
|association_with_transcript=24bp_to_ENSMUST00000089018_5end | |association_with_transcript=24bp_to_ENSMUST00000089018_5end | ||
|cluster_id=chr6:113647068..113647153,+ | |||
|description=CAGE_peak_1_at_Tatdn2_5end | |description=CAGE_peak_1_at_Tatdn2_5end | ||
|id=chr6:113647068..113647153,+ | |id=chr6:113647068..113647153,+ | ||
|ontology_enrichment_celltype=CL:0000988!2.11e-10!32;CL:0002032!2.11e-10!32;CL:0000037!2.11e-10!32;CL:0000566!2.11e-10!32;CL:0000837!2.11e-10!32;CL:0000034!2.30e-08!97;CL:0000117!4.63e-08!23;CL:0000337!4.63e-08!23;CL:0002031!9.06e-08!25;CL:0000791!2.25e-07!9;CL:0000789!2.25e-07!9;CL:0002420!2.25e-07!9;CL:0002419!2.25e-07!9;CL:0000790!2.25e-07!9;CL:0000838!5.43e-07!12;CL:0000542!6.54e-07!13;CL:0000051!6.54e-07!13 | |ontology_enrichment_celltype=CL:0000988!2.11e-10!32;CL:0002032!2.11e-10!32;CL:0000037!2.11e-10!32;CL:0000566!2.11e-10!32;CL:0000837!2.11e-10!32;CL:0000034!2.30e-08!97;CL:0000117!4.63e-08!23;CL:0000337!4.63e-08!23;CL:0002031!9.06e-08!25;CL:0000791!2.25e-07!9;CL:0000789!2.25e-07!9;CL:0002420!2.25e-07!9;CL:0002419!2.25e-07!9;CL:0000790!2.25e-07!9;CL:0000838!5.43e-07!12;CL:0000542!6.54e-07!13;CL:0000051!6.54e-07!13 | ||
|ontology_enrichment_celltype_v019_2=CL:0000988,2.10e-10,32;CL:0002032,2.10e-10,32;CL:0000037,2.10e-10,32;CL:0000837,2.10e-10,32;CL:0000034,2.29e-08,97;CL:0000117,4.63e-08,23;CL:0000337,4.63e-08,23;CL:0002031,9.02e-08,25;CL:0000791,2.25e-07,9;CL:0000789,2.25e-07,9;CL:0002420,2.25e-07,9;CL:0002419,2.25e-07,9;CL:0000790,2.25e-07,9;CL:0000838,5.43e-07,12;CL:0000542,6.54e-07,13;CL:0000051,6.54e-07,13 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007811!2.31e-12!86;UBERON:0000153!3.59e-11!94;UBERON:0002020!3.08e-10!34;UBERON:0001049!6.36e-10!52;UBERON:0005068!6.36e-10!52;UBERON:0006241!6.36e-10!52;UBERON:0007135!6.36e-10!52;UBERON:0000955!1.80e-08!50;UBERON:0006238!1.80e-08!50;UBERON:0002791!3.77e-08!29;UBERON:0003528!3.77e-08!29;UBERON:0001893!3.77e-08!29;UBERON:0002616!4.02e-08!49;UBERON:0002780!6.06e-08!39;UBERON:0001890!6.06e-08!39;UBERON:0006240!6.06e-08!39;UBERON:0003080!6.35e-08!40;UBERON:0000033!7.59e-08!63;UBERON:0002390!9.58e-08!45;UBERON:0003061!9.58e-08!45;UBERON:0003056!7.14e-07!49 | |ontology_enrichment_uberon=UBERON:0007811!2.31e-12!86;UBERON:0000153!3.59e-11!94;UBERON:0002020!3.08e-10!34;UBERON:0001049!6.36e-10!52;UBERON:0005068!6.36e-10!52;UBERON:0006241!6.36e-10!52;UBERON:0007135!6.36e-10!52;UBERON:0000955!1.80e-08!50;UBERON:0006238!1.80e-08!50;UBERON:0002791!3.77e-08!29;UBERON:0003528!3.77e-08!29;UBERON:0001893!3.77e-08!29;UBERON:0002616!4.02e-08!49;UBERON:0002780!6.06e-08!39;UBERON:0001890!6.06e-08!39;UBERON:0006240!6.06e-08!39;UBERON:0003080!6.35e-08!40;UBERON:0000033!7.59e-08!63;UBERON:0002390!9.58e-08!45;UBERON:0003061!9.58e-08!45;UBERON:0003056!7.14e-07!49 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,3.08e-10,34;UBERON:0000073,4.76e-10,54;UBERON:0001049,6.36e-10,52;UBERON:0005068,6.36e-10,52;UBERON:0006241,6.36e-10,52;UBERON:0007135,6.36e-10,52;UBERON:0000955,3.34e-08,47;UBERON:0006238,3.34e-08,47;UBERON:0003528,3.77e-08,29;UBERON:0002791,3.77e-08,29;UBERON:0001893,3.77e-08,29;UBERON:0002780,6.06e-08,39;UBERON:0001890,6.06e-08,39;UBERON:0006240,6.06e-08,39;UBERON:0003080,6.35e-08,40;UBERON:0002616,7.49e-08,46;UBERON:0002390,9.58e-08,45;UBERON:0003061,9.58e-08,45;UBERON:0002346,4.11e-07,64;UBERON:0003075,4.11e-07,64;UBERON:0007284,4.11e-07,64;UBERON:0003056,7.14e-07,49;UBERON:0003081,7.24e-07,87;UBERON:0010314,7.60e-07,92 | |||
|phase1_expression=11.69086583865,10.4692622291808,10.9199817453489,7.56160528267075,8.5152274090879,13.766100296775,12.3814699515629,33.1846941244851,66.0299106891317,68.8149707386661,33.0450678675225,34.2222562089993,31.8433357672043,30.0726184321351,13.9906099962578,15.7930708564064,14.6907994406911,23.6596624018678,27.1486578539363,27.585327366872,11.1406710097901,9.92909512008853,10.9703911438353,6.87967418011649,5.27641346454491,11.4846392823004,7.75371593086335,6.03319451520489,3.80046838912748,4.28451220591882,3.54768817048488,16.5107975099504,14.1464901144451,0,10.1098066912946,10.9714865936605,9.59595974433135,16.3227335987394,20.3147189576188,12.0410461113974,15.8822501768374,24.589637458504,15.0508209439658,5.79125362687656,7.09638518536602,5.32285581268876,8.60630478782843,7.84890562969608,8.34807494390993,6.9994763666742,5.31948402176378,5.75010257459886,58.7239121202077,53.6767985088395,54.4471954610792,5.65970759279083,5.15760191889762,11.3447860301037,19.624696703381,15.869729378161,17.747279298173,8.13226876965917,14.2287167377782,13.9484456178617,9.88866362566974,12.7886420690298,10.1864037576258,8.4528027170742,15.6571314585801,18.4958135514416,15.5640471400023,22.8520787523043,17.4486147351775,16.9037302916637,18.5940213775379,13.7882817991503,13.2139057199266,13.6625451751151,11.366883460962,19.5191705840687,17.7486028588675,13.022834263919,12.8424179540635,12.9435400307286,16.8078072554491,18.2669722993674,15.0913981647049,21.9951346073855,10.0715837133135,5.51672388779534,19.1310562543107,3.44169550792555,17.6792546764015,2.69851595818909,1.29955283489534,3.58421509677868,8.98844288843212,5.62420064507591,7.27400812888033,8.83348936275851,15.7744630149882,5.13305909657271,15.2883143823987,21.3320010945999,6.49473123033642,6.58735650235256,6.57181778519218,5.59501010623394,4.91981978929626,8.16431764856536,7.98032503124225,6.39377504455497,7.37969591219387,6.78251882486802,8.46638691377075,7.41432888845085,8.65182387070309,4.33798070759735,9.73071607144862,14.0737159454246,13.471332626084,12.1218813283806,1.86391761218122,18.4451902117275,14.6612694769419,4.85368404896324,36.3039827252938,19.7967901227825,27.574239274855,11.3840885947665,15.0975198930147,27.8952661690559,15.2965401769203,24.2929684463814,13.714010940931,13.7905073607594,16.2942982160506,8.21086006026614,8.08712826987759,8.20723237957248,8.58794923553845,8.27647575960503,9.18316862007281,9.49440352365005,18.5739642683125,15.8861013153214,16.6789069716317,8.2785078636485,12.0718076042392,14.3720620927543,11.0849208223288,10.7405908889512,9.73165372289593,7.66154766348766,9.05441400194951,11.9420560091096,14.0442637462647,15.1835265197682,25.5747149456033,12.2204205795946,10.3191466391682,12.42428224081,10.180023630164,11.8058539048442,13.5755059340893,13.0219009060228,15.8281306825775,15.2962598500992,18.2661433403963,13.9542344467231,22.6992666728396,20.3217982521212,15.1489579550825,17.5810408576087,12.1968170167194,26.6522946062347,2.64335026387038,6.87571473325215,12.3707185310436,10.9151235774406,10.0516619831233,7.66397393568702,6.67134131534611,4.1849637744763,4.74529061544512,8.72904460037258,9.0480675168097,7.95825888164603,8.38345574612217,7.19055526923377,5.40345124686736,6.37252074413975,8.15571974098251,8.79713547094912,9.01661885384643,8.14605311381257,9.30971938404604,15.5701520156507,10.9399209224965,13.5801336141234,6.27994911365499,9.99517027766584,4.74324203339438,9.84386123724955,11.4004217165658,9.66907083254871,6.28866376304359,9.16473207059184,8.91190481234969,6.61701116136864,11.1873306474774,6.86403532970204,7.18841032636773,7.81495990103857,3.12037673114561,6.56705082662491,5.9201146462231,5.30687873499704,8.49864674766381,11.3694847062291,7.00749398700711,8.65699937453459,9.62230017982859,7.03526281255626,8.33152743101048,15.6106918286239,11.1920952315396,11.9590932410338,14.8292934851463,8.52089236521838,11.9152637487468,9.40218880779825,19.6028669121054,10.8781136763742,7.86822836830458,8.27810238914197,11.559642479121,13.7137673312878,7.54100748732707,11.8661335786055,4.73262329124385,5.46614242015294,4.73931475012158,7.64700153448166,10.0259403337077,3.67999490025482,5.66734982344852,5.84511715822624,9.88219444866309,17.0300297703558,7.52282451603824,12.6426578603751,16.7773568134183,9.56826713240706,7.96470830039777,8.98288353773431,6.65111825322452,7.35559811048003,8.56375489354241,7.99331384654211,11.3708448994017,13.4507479906677,9.9819265947722,10.7452497698177,11.5960469432499,10.3135543248187,13.6175842301515,9.54323798365944,10.2193360188376,12.6458850668639,10.4630737848941,11.2372355089304,9.3792941743209,16.4411072521884,10.560226862867,14.192748747876,4.19003956304428,6.76033637060068,8.55761461488299,12.002272060703,11.2210003362948,12.6388492803697,7.28702091574627,13.5360470467672,9.05615668228619,13.6215332855727,8.51894825900674,13.7508973613424,12.1657862671712,13.0403558727718,49.9736584181935,40.0261153645662,48.0935908839395,0.954670618015114,8.69923982348122,9.5560149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|phase1_expression=11.69086583865,10.4692622291808,10.9199817453489,7.56160528267075,8.5152274090879,13.766100296775,12.3814699515629,33.1846941244851,66.0299106891317,68.8149707386661,33.0450678675225,34.2222562089993,31.8433357672043,30.0726184321351,13.9906099962578,15.7930708564064,14.6907994406911,23.6596624018678,27.1486578539363,27.585327366872,11.1406710097901,9.92909512008853,10.9703911438353,6.87967418011649,5.27641346454491,11.4846392823004,7.75371593086335,6.03319451520489,3.80046838912748,4.28451220591882,3.54768817048488,16.5107975099504,14.1464901144451,0,10.1098066912946,10.9714865936605,9.59595974433135,16.3227335987394,20.3147189576188,12.0410461113974,15.8822501768374,24.589637458504,15.0508209439658,5.79125362687656,7.09638518536602,5.32285581268876,8.60630478782843,7.84890562969608,8.34807494390993,6.9994763666742,5.31948402176378,5.75010257459886,58.7239121202077,53.6767985088395,54.4471954610792,5.65970759279083,5.15760191889762,11.3447860301037,19.624696703381,15.869729378161,17.747279298173,8.13226876965917,14.2287167377782,13.9484456178617,9.88866362566974,12.7886420690298,10.1864037576258,8.4528027170742,15.6571314585801,18.4958135514416,15.5640471400023,22.8520787523043,17.4486147351775,16.9037302916637,18.5940213775379,13.7882817991503,13.2139057199266,13.6625451751151,11.366883460962,19.5191705840687,17.7486028588675,13.022834263919,12.8424179540635,12.9435400307286,16.8078072554491,18.2669722993674,15.0913981647049,21.9951346073855,10.0715837133135,5.51672388779534,19.1310562543107,3.44169550792555,17.6792546764015,2.69851595818909,1.29955283489534,3.58421509677868,8.98844288843212,5.62420064507591,7.27400812888033,8.83348936275851,15.7744630149882,5.13305909657271,15.2883143823987,21.3320010945999,6.49473123033642,6.58735650235256,6.57181778519218,5.59501010623394,4.91981978929626,8.16431764856536,7.98032503124225,6.39377504455497,7.37969591219387,6.78251882486802,8.46638691377075,7.41432888845085,8.65182387070309,4.33798070759735,9.73071607144862,14.0737159454246,13.471332626084,12.1218813283806,1.86391761218122,18.4451902117275,14.6612694769419,4.85368404896324,36.3039827252938,19.7967901227825,27.574239274855,11.3840885947665,15.0975198930147,27.8952661690559,15.2965401769203,24.2929684463814,13.714010940931,13.7905073607594,16.2942982160506,8.21086006026614,8.08712826987759,8.20723237957248,8.58794923553845,8.27647575960503,9.18316862007281,9.49440352365005,18.5739642683125,15.8861013153214,16.6789069716317,8.2785078636485,12.0718076042392,14.3720620927543,11.0849208223288,10.7405908889512,9.73165372289593,7.66154766348766,9.05441400194951,11.9420560091096,14.0442637462647,15.1835265197682,25.5747149456033,12.2204205795946,10.3191466391682,12.42428224081,10.180023630164,11.8058539048442,13.5755059340893,13.0219009060228,15.8281306825775,15.2962598500992,18.2661433403963,13.9542344467231,22.6992666728396,20.3217982521212,15.1489579550825,17.5810408576087,12.1968170167194,26.6522946062347,2.64335026387038,6.87571473325215,12.3707185310436,10.9151235774406,10.0516619831233,7.66397393568702,6.67134131534611,4.1849637744763,4.74529061544512,8.72904460037258,9.0480675168097,7.95825888164603,8.38345574612217,7.19055526923377,5.40345124686736,6.37252074413975,8.15571974098251,8.79713547094912,9.01661885384643,8.14605311381257,9.30971938404604,15.5701520156507,10.9399209224965,13.5801336141234,6.27994911365499,9.99517027766584,4.74324203339438,9.84386123724955,11.4004217165658,9.66907083254871,6.28866376304359,9.16473207059184,8.91190481234969,6.61701116136864,11.1873306474774,6.86403532970204,7.18841032636773,7.81495990103857,3.12037673114561,6.56705082662491,5.9201146462231,5.30687873499704,8.49864674766381,11.3694847062291,7.00749398700711,8.65699937453459,9.62230017982859,7.03526281255626,8.33152743101048,15.6106918286239,11.1920952315396,11.9590932410338,14.8292934851463,8.52089236521838,11.9152637487468,9.40218880779825,19.6028669121054,10.8781136763742,7.86822836830458,8.27810238914197,11.559642479121,13.7137673312878,7.54100748732707,11.8661335786055,4.73262329124385,5.46614242015294,4.73931475012158,7.64700153448166,10.0259403337077,3.67999490025482,5.66734982344852,5.84511715822624,9.88219444866309,17.0300297703558,7.52282451603824,12.6426578603751,16.7773568134183,9.56826713240706,7.96470830039777,8.98288353773431,6.65111825322452,7.35559811048003,8.56375489354241,7.99331384654211,11.3708448994017,13.4507479906677,9.9819265947722,10.7452497698177,11.5960469432499,10.3135543248187,13.6175842301515,9.54323798365944,10.2193360188376,12.6458850668639,10.4630737848941,11.2372355089304,9.3792941743209,16.4411072521884,10.560226862867,14.192748747876,4.19003956304428,6.76033637060068,8.55761461488299,12.002272060703,11.2210003362948,12.6388492803697,7.28702091574627,13.5360470467672,9.05615668228619,13.6215332855727,8.51894825900674,13.7508973613424,12.1657862671712,13.0403558727718,49.9736584181935,40.0261153645662,48.0935908839395,0.954670618015114,8.69923982348122,9.5560149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| ||
|short_description=p1@Tatdn2 | |short_description=p1@Tatdn2 | ||
}} | }} |
Latest revision as of 11:40, 26 September 2015
Short description: | p1@Tatdn2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Tatdn2_5end |
Coexpression cluster: | MCL_coexpression_mm9:1919 |
Association with transcript: | 24bp_to_ENSMUST00000089018_5end |
EntrezGene: | Tatdn2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 2.10e-10 | 32 |
hematopoietic oligopotent progenitor cell | 2.10e-10 | 32 |
hematopoietic stem cell | 2.10e-10 | 32 |
hematopoietic multipotent progenitor cell | 2.10e-10 | 32 |
stem cell | 2.29e-08 | 97 |
CNS neuron (sensu Vertebrata) | 4.63e-08 | 23 |
neuroblast (sensu Vertebrata) | 4.63e-08 | 23 |
hematopoietic lineage restricted progenitor cell | 9.02e-08 | 25 |
mature alpha-beta T cell | 2.25e-07 | 9 |
alpha-beta T cell | 2.25e-07 | 9 |
immature T cell | 2.25e-07 | 9 |
mature T cell | 2.25e-07 | 9 |
immature alpha-beta T cell | 2.25e-07 | 9 |
lymphoid lineage restricted progenitor cell | 5.43e-07 | 12 |
lymphocyte | 6.54e-07 | 13 |
common lymphoid progenitor | 6.54e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
gray matter | 3.08e-10 | 34 |
regional part of nervous system | 4.76e-10 | 54 |
neural tube | 6.36e-10 | 52 |
neural rod | 6.36e-10 | 52 |
future spinal cord | 6.36e-10 | 52 |
neural keel | 6.36e-10 | 52 |
brain | 3.34e-08 | 47 |
future brain | 3.34e-08 | 47 |
brain grey matter | 3.77e-08 | 29 |
regional part of telencephalon | 3.77e-08 | 29 |
telencephalon | 3.77e-08 | 29 |
regional part of forebrain | 6.06e-08 | 39 |
forebrain | 6.06e-08 | 39 |
future forebrain | 6.06e-08 | 39 |
anterior neural tube | 6.35e-08 | 40 |
regional part of brain | 7.49e-08 | 46 |
hematopoietic system | 9.58e-08 | 45 |
blood island | 9.58e-08 | 45 |
neurectoderm | 4.11e-07 | 64 |
neural plate | 4.11e-07 | 64 |
presumptive neural plate | 4.11e-07 | 64 |
pre-chordal neural plate | 7.14e-07 | 49 |
lateral plate mesoderm | 7.24e-07 | 87 |
structure with developmental contribution from neural crest | 7.60e-07 | 92 |