FFCP PHASE1:Mm9::chr5:141124934..141124968,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=78339 | |EntrezGene=78339 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1085 | |MCL_coexpression_id=1085 | ||
|TSSclassifier=NA | |||
|UniProt=Q6P5F7 | |UniProt=Q6P5F7 | ||
|association_with_transcript=16bp_to_ENSMUST00000042661,NM_175274,uc009ahw.2,uc012egc.1_5end | |association_with_transcript=16bp_to_ENSMUST00000042661,NM_175274,uc009ahw.2,uc012egc.1_5end | ||
|cluster_id=chr5:141124934..141124968,- | |||
|description=CAGE_peak_2_at_Ttyh3_5end | |description=CAGE_peak_2_at_Ttyh3_5end | ||
|id=chr5:141124934..141124968,- | |id=chr5:141124934..141124968,- | ||
|ontology_enrichment_celltype=CL:0000117!1.19e-12!23;CL:0000337!1.19e-12!23;CL:0002319!8.10e-12!43;CL:0000221!1.34e-11!44;CL:0000133!1.34e-11!44;CL:0000540!8.40e-10!33;CL:0000047!8.40e-10!33;CL:0000031!8.40e-10!33;CL:0000404!8.40e-10!33;CL:0000055!3.50e-08!50 | |ontology_enrichment_celltype=CL:0000117!1.19e-12!23;CL:0000337!1.19e-12!23;CL:0002319!8.10e-12!43;CL:0000221!1.34e-11!44;CL:0000133!1.34e-11!44;CL:0000540!8.40e-10!33;CL:0000047!8.40e-10!33;CL:0000031!8.40e-10!33;CL:0000404!8.40e-10!33;CL:0000055!3.50e-08!50 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.19e-12,23;CL:0000337,1.19e-12,23;CL:0002319,8.10e-12,43;CL:0000221,1.33e-11,44;CL:0000133,1.33e-11,44;CL:0000540,8.40e-10,33;CL:0000047,8.40e-10,33;CL:0000031,8.40e-10,33;CL:0000404,8.40e-10,33 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!6.10e-25!73;UBERON:0005743!6.10e-25!73;UBERON:0004121!7.66e-24!102;UBERON:0000924!7.66e-24!102;UBERON:0006601!7.66e-24!102;UBERON:0000073!5.90e-23!75;UBERON:0001016!5.90e-23!75;UBERON:0002346!4.00e-22!71;UBERON:0003075!4.00e-22!71;UBERON:0007284!4.00e-22!71;UBERON:0001049!1.65e-21!52;UBERON:0005068!1.65e-21!52;UBERON:0006241!1.65e-21!52;UBERON:0007135!1.65e-21!52;UBERON:0000955!9.55e-20!50;UBERON:0006238!9.55e-20!50;UBERON:0002020!1.65e-19!34;UBERON:0002616!4.05e-19!49;UBERON:0002791!3.15e-16!29;UBERON:0003528!3.15e-16!29;UBERON:0001893!3.15e-16!29;UBERON:0000033!3.33e-16!63;UBERON:0003080!4.66e-16!40;UBERON:0002780!1.20e-15!39;UBERON:0001890!1.20e-15!39;UBERON:0006240!1.20e-15!39;UBERON:0003056!4.60e-15!49;UBERON:0000956!2.85e-12!21;UBERON:0001869!2.85e-12!21;UBERON:0000203!2.85e-12!21;UBERON:0002619!7.17e-10!17;UBERON:0000153!1.76e-09!94;UBERON:0007811!1.32e-08!86 | |ontology_enrichment_uberon=UBERON:0001017!6.10e-25!73;UBERON:0005743!6.10e-25!73;UBERON:0004121!7.66e-24!102;UBERON:0000924!7.66e-24!102;UBERON:0006601!7.66e-24!102;UBERON:0000073!5.90e-23!75;UBERON:0001016!5.90e-23!75;UBERON:0002346!4.00e-22!71;UBERON:0003075!4.00e-22!71;UBERON:0007284!4.00e-22!71;UBERON:0001049!1.65e-21!52;UBERON:0005068!1.65e-21!52;UBERON:0006241!1.65e-21!52;UBERON:0007135!1.65e-21!52;UBERON:0000955!9.55e-20!50;UBERON:0006238!9.55e-20!50;UBERON:0002020!1.65e-19!34;UBERON:0002616!4.05e-19!49;UBERON:0002791!3.15e-16!29;UBERON:0003528!3.15e-16!29;UBERON:0001893!3.15e-16!29;UBERON:0000033!3.33e-16!63;UBERON:0003080!4.66e-16!40;UBERON:0002780!1.20e-15!39;UBERON:0001890!1.20e-15!39;UBERON:0006240!1.20e-15!39;UBERON:0003056!4.60e-15!49;UBERON:0000956!2.85e-12!21;UBERON:0001869!2.85e-12!21;UBERON:0000203!2.85e-12!21;UBERON:0002619!7.17e-10!17;UBERON:0000153!1.76e-09!94;UBERON:0007811!1.32e-08!86 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,6.09e-25,73;UBERON:0001016,5.89e-23,75;UBERON:0000073,1.87e-22,54;UBERON:0001049,1.65e-21,52;UBERON:0005068,1.65e-21,52;UBERON:0006241,1.65e-21,52;UBERON:0007135,1.65e-21,52;UBERON:0004121,3.69e-21,95;UBERON:0000924,3.69e-21,95;UBERON:0006601,3.69e-21,95;UBERON:0010371,3.52e-20,73;UBERON:0002346,1.18e-19,64;UBERON:0003075,1.18e-19,64;UBERON:0007284,1.18e-19,64;UBERON:0002020,1.65e-19,34;UBERON:0000955,1.73e-18,47;UBERON:0006238,1.73e-18,47;UBERON:0002616,7.20e-18,46;UBERON:0003528,3.15e-16,29;UBERON:0002791,3.15e-16,29;UBERON:0001893,3.15e-16,29;UBERON:0003080,4.66e-16,40;UBERON:0002780,1.20e-15,39;UBERON:0001890,1.20e-15,39;UBERON:0006240,1.20e-15,39;UBERON:0003056,4.60e-15,49;UBERON:0010314,1.56e-12,92;UBERON:0000956,2.85e-12,21;UBERON:0001869,2.85e-12,21;UBERON:0000203,2.85e-12,21;UBERON:0002619,7.17e-10,17 | |||
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|phase1_expression=7.68714466103011,5.93258192986914,6.3699893514535,16.6355316218757,26.5474736871564,7.21880869221126,7.70921713965235,8.90950931746876,6.19470377467334,9.83071010552373,1.54096171402954,0.797721589953364,18.8320802924326,18.8828069225034,3.33109761815663,3.03712901084739,6.29605690315332,9.46386496074713,9.04955261797876,12.7316895539409,13.7770130044733,10.1276770224903,4.4403964153619,3.83981814704176,5.73523202667925,5.7423196411502,4.73838195774982,4.30942465371778,17.29213117053,13.8616571367962,4.6563407237614,1.90509202037889,4.92051830067656,0,4.62162591602039,4.82080471539628,7.9626048942324,7.53356935326434,8.5946887897618,2.61761871986899,13.5293242247133,23.9065919735456,9.71020706062307,5.03587271902309,4.46058497365864,6.24058957349717,17.2126095756569,63.4453205067099,45.6947260087701,33.2475127417025,31.4969448657066,27.3129872293446,6.04017381807851,17.4086914082723,8.4023449785616,5.14518872071894,8.02293631828519,4.64104883049698,44.1049884673923,25.3915670050576,32.3254015788151,21.3472055203553,9.78224275722253,31.0465402462083,17.7995945262055,30.5506449426823,34.1544125990981,64.5486752940212,45.6234294157302,46.0370249711065,51.73994049244,55.9875929431455,32.2468069789356,36.6247489652713,31.629005436018,27.5765635983006,19.82085857989,32.0495218593821,29.9532739849675,39.0383411681374,42.3587789879157,36.4639359389732,22.8930059181132,19.1339287410771,31.6292372897997,53.0331453852602,50.5419466836815,48.4638559145781,2.34751199332871,3.24957708459178,10.4351215932604,5.16254326188832,0.679971333707751,2.15881276655127,0.649776417447669,1.34408066129201,5.19644354487482,19.9403477416328,13.768658243952,12.3668851078619,10.8449433228044,19.2489716121477,33.1246811618639,28.4426681261332,1.5154372870785,1.26679932737549,1.51657333504435,6.8510327831436,16.3130866697718,14.2504453502232,15.7871647357184,24.6617037432834,34.5923245884088,22.9098413639986,29.5147654910619,28.9033160058254,1.73036477414062,2.89198713839823,11.4999371753484,11.6472131962135,6.62524555381181,7.27312879702833,0,12.296793474485,25.3430515244281,7.40825460104915,1.55759661857696,1.19980546198682,1.01656181658452,28.9095934051308,54.4425717354165,39.2041578592137,33.8957424374939,43.7273432034865,29.0903262383384,40.3980745038717,14.8685471221462,17.7901967972433,34.1175723885461,2.31486041475121,10.7999967659044,12.644615743841,12.4242869565691,14.9197769657358,15.7844678031081,14.2206229516183,19.021450085625,15.5222022443409,11.4251036254406,14.9393803332577,15.8356011747554,17.3164628617784,12.5121262151519,14.9748431604532,13.1700567301084,17.5150154800274,2.1066395619397,0.772043721344145,1.70498099637356,8.49215667395558,7.97388603935727,8.4629168886677,10.6535131013345,9.24791889212798,6.17068451549513,6.27841650826101,7.24338183778972,5.3712057488898,6.91151369636618,5.25335885053105,5.99909190639332,4.23979963533464,2.41505126820156,3.22095405024892,29.6508827475419,62.6689089389842,2.97376904685418,3.17340679996253,11.5175655289026,12.5407802804637,11.7269389803105,16.1346819698674,16.4559752445204,18.6421113590308,12.3377556001573,11.1995289212327,11.3100843960121,13.7279965708394,13.4525220112193,11.6846523125049,4.75503709724327,5.57595565112228,9.293727146701,13.0243304375091,15.7790829942313,9.16430975303914,8.14600446104028,8.76697748628982,11.5722862937391,7.67572769493931,5.49495547444812,5.42947521255922,4.74324203339438,5.83957870006329,3.93117990226406,4.04751802292737,4.05720242777006,6.27060615356284,4.83789118384698,3.45235364940973,5.67473293712624,4.11842119782122,4.31304619582064,5.20997326735905,4.68056509671841,5.05157755894223,1.97337154874103,5.78932225636041,18.1058126363273,10.9905018826881,13.3631280682461,13.0703716046895,14.0814148973101,14.9080569123216,13.5684875305028,18.9279638422065,25.8521636334153,27.6830862060969,38.7475087837694,25.3988137809394,24.866637388689,25.7475324275091,13.5712155545345,9.79030230873677,47.2093702098275,17.1080782708934,20.3899249284496,31.6471553798949,16.3934945376675,2.27223834483936,10.4117712407365,7.80877488593277,13.1408272617007,14.3381278771531,10.0259403337077,10.4738316391868,14.5731852602962,12.5670018901864,11.8586333383957,41.7717711348349,10.7874464758284,16.9162323483892,16.2886959353576,10.2281476242972,3.98235415019888,8.49732226542435,9.67435382287203,4.71512699389745,12.6979813938732,5.22639751504677,5.68542244970086,8.36127577798263,4.63446591900138,3.79244109522979,2.10837217149998,1.03135543248187,6.46835250932197,9.72329907769075,15.264324686365,14.3605813471167,14.5418991586664,18.3719882130133,13.3284706687718,10.9607381681256,1.87737366450968,2.33015277950202,1.7642271844397,11.7069239588451,10.8181165886257,14.7766666073982,17.6671069124642,22.4873032650734,11.9507143018239,24.2907145633768,9.05615668228619,15.2726282292785,7.77817014952789,7.15800136617826,9.43190171275074,8.23601423543482,4.41943917984024,6.15786390224095,6.49539876880792,0.954670618015114,12.4952717464548,14.6390016331331,12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| ||
|short_description=p2@Ttyh3 | |short_description=p2@Ttyh3 | ||
}} | }} |
Latest revision as of 16:16, 25 September 2015
Short description: | p2@Ttyh3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Ttyh3_5end |
Coexpression cluster: | MCL_coexpression_mm9:1085 |
Association with transcript: | 16bp_to_ENSMUST00000042661, NM_175274, uc009ahw.2, uc012egc.1_5end |
EntrezGene: | Ttyh3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.19e-12 | 23 |
neuroblast (sensu Vertebrata) | 1.19e-12 | 23 |
neural cell | 8.10e-12 | 43 |
ectodermal cell | 1.33e-11 | 44 |
neurectodermal cell | 1.33e-11 | 44 |
neuron | 8.40e-10 | 33 |
neuronal stem cell | 8.40e-10 | 33 |
neuroblast | 8.40e-10 | 33 |
electrically signaling cell | 8.40e-10 | 33 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 6.09e-25 | 73 |
nervous system | 5.89e-23 | 75 |
regional part of nervous system | 1.87e-22 | 54 |
neural tube | 1.65e-21 | 52 |
neural rod | 1.65e-21 | 52 |
future spinal cord | 1.65e-21 | 52 |
neural keel | 1.65e-21 | 52 |
ectoderm-derived structure | 3.69e-21 | 95 |
ectoderm | 3.69e-21 | 95 |
presumptive ectoderm | 3.69e-21 | 95 |
ecto-epithelium | 3.52e-20 | 73 |
neurectoderm | 1.18e-19 | 64 |
neural plate | 1.18e-19 | 64 |
presumptive neural plate | 1.18e-19 | 64 |
gray matter | 1.65e-19 | 34 |
brain | 1.73e-18 | 47 |
future brain | 1.73e-18 | 47 |
regional part of brain | 7.20e-18 | 46 |
brain grey matter | 3.15e-16 | 29 |
regional part of telencephalon | 3.15e-16 | 29 |
telencephalon | 3.15e-16 | 29 |
anterior neural tube | 4.66e-16 | 40 |
regional part of forebrain | 1.20e-15 | 39 |
forebrain | 1.20e-15 | 39 |
future forebrain | 1.20e-15 | 39 |
pre-chordal neural plate | 4.60e-15 | 49 |
structure with developmental contribution from neural crest | 1.56e-12 | 92 |
cerebral cortex | 2.85e-12 | 21 |
cerebral hemisphere | 2.85e-12 | 21 |
pallium | 2.85e-12 | 21 |
regional part of cerebral cortex | 7.17e-10 | 17 |