FFCP PHASE1:Hg19::chr2:224467409..224467423,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr2:224467409..224467423,-
|short_description=p3@SCG2
|description=CAGE_peak_3_at_SCG2_5end
|association_with_transcript=-188bp_to_ENST00000305409_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7857 | |EntrezGene=7857 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10575 | |HGNC=10575 | ||
|TSSclassifier=strong | |||
|UniProt=P13521 | |UniProt=P13521 | ||
|association_with_transcript=-188bp_to_ENST00000305409_5end | |||
|cluster_id=chr2:224467409..224467423,- | |||
|coexpression_cluster_id=C152 | |||
|description=CAGE_peak_3_at_SCG2_5end | |||
|id=chr2:224467409..224467423,- | |||
|ontology_enrichment_celltype=CL:0002274!1.98e-07!5;CL:0000457!1.98e-07!5;CL:0002191!1.98e-07!5;CL:0000097!1.98e-07!5;CL:0000831!1.98e-07!5;CL:0002028!1.98e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0002553;5.16e-21;1!CL:0002616;5.16e-21;1!CL:0000047;3.34e-11;2!CL:0002579;6.78e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002616,2.82e-21,1;CL:0002553,3.45e-21,1;CL:0002579,8.29e-08,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:171!3.25e-10!10 | |||
|ontology_enrichment_disease_v019=DOID:171;2.66e-32;10!DOID:3095;5.98e-15;22!DOID:2994;5.98e-15;22 | |||
|ontology_enrichment_disease_v019_2=DOID:171,2.89e-32,10;DOID:3095,6.20e-15,22;DOID:2994,6.20e-15,22 | |||
|ontology_enrichment_uberon=UBERON:0001017!1.81e-28!82;UBERON:0000073!5.70e-28!94;UBERON:0001016!5.70e-28!94;UBERON:0005743!7.36e-27!86;UBERON:0001049!3.19e-21!57;UBERON:0005068!3.19e-21!57;UBERON:0006241!3.19e-21!57;UBERON:0007135!3.19e-21!57;UBERON:0000955!2.47e-20!69;UBERON:0006238!2.47e-20!69;UBERON:0002346!4.34e-20!90;UBERON:0002616!3.47e-18!59;UBERON:0000924!7.43e-16!173;UBERON:0006601!7.43e-16!173;UBERON:0003075!1.42e-15!86;UBERON:0007284!1.42e-15!86;UBERON:0002780!1.18e-14!41;UBERON:0001890!1.18e-14!41;UBERON:0006240!1.18e-14!41;UBERON:0003080!3.06e-14!42;UBERON:0002020!2.46e-13!34;UBERON:0003528!2.46e-13!34;UBERON:0004121!1.26e-12!169;UBERON:0000988!2.67e-12!3;UBERON:0001869!9.09e-12!32;UBERON:0007023!1.01e-11!115;UBERON:0002298!1.57e-11!8;UBERON:0001893!5.74e-11!34;UBERON:0002308!9.06e-11!9;UBERON:0000125!9.06e-11!9;UBERON:0000033!2.27e-10!123;UBERON:0000153!1.18e-09!129;UBERON:0007811!1.18e-09!129;UBERON:0000369!1.85e-09!4;UBERON:0002435!1.85e-09!4;UBERON:0000204!1.85e-09!4;UBERON:0010082!1.85e-09!4;UBERON:0002791!2.02e-09!33;UBERON:0003056!6.26e-09!61;UBERON:0002148!7.00e-09!2;UBERON:0009662!7.00e-09!2;UBERON:0001870!1.03e-08!2;UBERON:0003076!2.02e-08!15;UBERON:0003057!2.02e-08!15;UBERON:0002360!2.90e-08!2;UBERON:0000094!2.90e-08!2;UBERON:0007645!2.90e-08!2;UBERON:0001950!4.95e-08!20;UBERON:0004733!1.36e-07!12;UBERON:0002028!1.36e-07!12;UBERON:0007277!1.36e-07!12;UBERON:0002619!3.00e-07!22;UBERON:0002420!3.09e-07!9;UBERON:0007245!3.09e-07!9;UBERON:0010009!3.09e-07!9;UBERON:0010011!3.09e-07!9;UBERON:0000454!3.09e-07!9;UBERON:0004732!5.52e-07!13 | |||
|ontology_enrichment_uberon_v019=UBERON:0002346;1.97e-45;4!UBERON:0000923;1.97e-45;4!UBERON:0010316;1.97e-45;4!UBERON:0005291;1.97e-45;4!UBERON:0002050;1.57e-36;5!UBERON:0005423;1.57e-36;5!UBERON:0001874;5.16e-21;1!UBERON:0005406;3.34e-11;2!UBERON:0005383;6.78e-08;3!UBERON:0005382;6.78e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001874,7.72e-21,1;UBERON:0005406,2.47e-11,2;UBERON:0005383,7.76e-08,3;UBERON:0005382,7.76e-08,3 | |||
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| ||
|short_description=p3@SCG2 | |||
}} | }} |
Latest revision as of 00:15, 25 September 2015
Short description: | p3@SCG2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SCG2_5end |
Coexpression cluster: | C152_peripheral_neuroectodermal_neuroepithelioma_neuroblastoma_testicular_carcinoid_lung |
Association with transcript: | -188bp_to_ENST00000305409_5end |
EntrezGene: | SCG2 |
HGNC: | 10575 |
UniProt: | P13521 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
perirenal adipocyte cell | 2.82e-21 | 1 |
lung fibroblast | 3.45e-21 | 1 |
omentum preadipocyte | 8.29e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
putamen | 7.72e-21 | 1 |
perirenal fat | 2.47e-11 | 2 |
caudate-putamen | 7.76e-08 | 3 |
dorsal striatum | 7.76e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 2.89e-32 | 10 |
germ cell and embryonal cancer | 6.20e-15 | 22 |
germ cell cancer | 6.20e-15 | 22 |