FFCP PHASE1:Hg19::chr2:220325416..220325429,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr2:220325416..220325429,+
|short_description=p12@SPEG
|description=CAGE_peak_12_at_SPEG_5end
|association_with_transcript=-58bp_to_ENST00000396688_5end
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10290 | |EntrezGene=10290 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16901 | |HGNC=16901 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-58bp_to_ENST00000396688_5end | |||
|cluster_id=chr2:220325416..220325429,+ | |||
|coexpression_cluster_id=C4190 | |||
|description=CAGE_peak_12_at_SPEG_5end | |||
|id=chr2:220325416..220325429,+ | |||
|ontology_enrichment_celltype=CL:0000243!7.99e-08!15;CL:0000125!7.99e-08!15;CL:0000030!7.99e-08!15;CL:0000339!7.99e-08!15;CL:0000306!6.26e-07!4;CL:0002222!6.26e-07!4;CL:0002224!6.26e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0000306;3.94e-15;4!CL:0002222;3.94e-15;4!CL:0002224;3.94e-15;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000306,3.94e-15,4;CL:0002222,3.94e-15,4;CL:0002224,3.94e-15,4 | |||
|ontology_enrichment_development_v019=UBERON:0004140;5.55e-16;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5662;1.66e-15;1!DOID:114;2.07e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:5662,2.38e-15,1;DOID:114,2.00e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.13e-12!115;UBERON:0010077!6.26e-07!4;UBERON:0005389!6.26e-07!4;UBERON:0000484!6.26e-07!4;UBERON:0002546!6.26e-07!4;UBERON:0000965!6.26e-07!4;UBERON:0001803!6.26e-07!4;UBERON:0003073!6.26e-07!4;UBERON:0005426!6.26e-07!4;UBERON:0007625!6.27e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0006834;1.66e-15;1!UBERON:0002134;1.66e-15;1!UBERON:0005208;1.66e-15;1!UBERON:0004145;1.66e-15;1!UBERON:0005946;1.66e-15;1!UBERON:0005965;1.66e-15;1!UBERON:0002078;1.66e-15;1!UBERON:0010077;3.94e-15;4!UBERON:0005389;3.94e-15;4!UBERON:0000484;3.94e-15;4!UBERON:0000965;3.94e-15;4!UBERON:0001803;3.94e-15;4!UBERON:0007100;2.00e-09;25!UBERON:0002081;2.07e-08;2!UBERON:0002133;2.07e-08;2!UBERON:0001155;2.56e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002134,1.16e-15,1;UBERON:0005208,1.16e-15,1;UBERON:0005946,1.16e-15,1;UBERON:0005965,1.16e-15,1;UBERON:0002078,1.16e-15,1;UBERON:0006834,3.66e-15,1;UBERON:0010077,3.94e-15,4;UBERON:0005389,3.94e-15,4;UBERON:0000484,3.94e-15,4;UBERON:0002546,3.94e-15,4;UBERON:0000965,3.94e-15,4;UBERON:0001803,3.94e-15,4;UBERON:0003073,3.94e-15,4;UBERON:0005426,3.94e-15,4;UBERON:0007100,8.07e-09,27;UBERON:0002081,1.73e-08,2;UBERON:0002133,1.73e-08,2;UBERON:0010227,1.73e-08,2;UBERON:0000076,5.00e-08,8;UBERON:0001155,2.68e-07,9 | |||
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| ||
|short_description=p12@SPEG | |||
}} | }} |
Latest revision as of 21:26, 24 September 2015
Short description: | p12@SPEG |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_SPEG_5end |
Coexpression cluster: | C4190_colon_heart_smooth_left_mesothelioma_esophagus_uterus |
Association with transcript: | -58bp_to_ENST00000396688_5end |
EntrezGene: | SPEG |
HGNC: | 16901 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
crystallin accumulating cell | 3.94e-15 | 4 |
vertebrate lens cell | 3.94e-15 | 4 |
lens epithelial cell | 3.94e-15 | 4 |
Ontology term | p-value | n |
---|---|---|
tricuspid valve | 1.16e-15 | 1 |
right atrium valve | 1.16e-15 | 1 |
outflow tract of atrium | 1.16e-15 | 1 |
outflow part of right atrium | 1.16e-15 | 1 |
right cardiac atrium | 1.16e-15 | 1 |
uterus or analog | 3.66e-15 | 1 |
cuboidal epithelium | 3.94e-15 | 4 |
transparent eye structure | 3.94e-15 | 4 |
simple cuboidal epithelium | 3.94e-15 | 4 |
cranial placode | 3.94e-15 | 4 |
lens of camera-type eye | 3.94e-15 | 4 |
epithelium of lens | 3.94e-15 | 4 |
lens placode | 3.94e-15 | 4 |
lens vesicle | 3.94e-15 | 4 |
primary circulatory organ | 8.07e-09 | 27 |
cardiac atrium | 1.73e-08 | 2 |
atrioventricular valve | 1.73e-08 | 2 |
future cardiac atrium | 1.73e-08 | 2 |
external ectoderm | 5.00e-08 | 8 |
colon | 2.68e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
pleomorphic carcinoma | 2.38e-15 | 1 |
heart disease | 2.00e-08 | 2 |