FFCP PHASE1:Mm9::chr11:102308911..102308924,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=217219 | |EntrezGene=217219 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=22 | |MCL_coexpression_id=22 | ||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-3bp_to_ENSMUST00000152015_5end | |association_with_transcript=-3bp_to_ENSMUST00000152015_5end | ||
|cluster_id=chr11:102308911..102308924,- | |||
|description=CAGE_peak_3_at_Fam171a2_5end | |description=CAGE_peak_3_at_Fam171a2_5end | ||
|id=chr11:102308911..102308924,- | |id=chr11:102308911..102308924,- | ||
|ontology_enrichment_celltype=CL:0000221!5.45e-17!44;CL:0000133!5.45e-17!44;CL:0000540!7.48e-17!33;CL:0000047!7.48e-17!33;CL:0000031!7.48e-17!33;CL:0000404!7.48e-17!33;CL:0002319!1.93e-16!43;CL:0000055!3.99e-15!50;CL:0000393!6.68e-15!39;CL:0000211!6.68e-15!39;CL:0000117!1.49e-14!23;CL:0000337!1.49e-14!23 | |ontology_enrichment_celltype=CL:0000221!5.45e-17!44;CL:0000133!5.45e-17!44;CL:0000540!7.48e-17!33;CL:0000047!7.48e-17!33;CL:0000031!7.48e-17!33;CL:0000404!7.48e-17!33;CL:0002319!1.93e-16!43;CL:0000055!3.99e-15!50;CL:0000393!6.68e-15!39;CL:0000211!6.68e-15!39;CL:0000117!1.49e-14!23;CL:0000337!1.49e-14!23 | ||
|ontology_enrichment_celltype_v019_2=CL:0000540,4.44e-19,33;CL:0000047,4.44e-19,33;CL:0000031,4.44e-19,33;CL:0000404,4.44e-19,33;CL:0000221,7.83e-18,44;CL:0000133,7.83e-18,44;CL:0002319,3.24e-17,43;CL:0000393,5.74e-17,39;CL:0000211,5.74e-17,39;CL:0000117,1.92e-16,23;CL:0000337,1.92e-16,23;CL:0002321,2.29e-07,70 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.23e-25,73;UBERON:0001016,1.85e-24,75;UBERON:0004121,1.34e-22,95;UBERON:0000924,1.34e-22,95;UBERON:0006601,1.34e-22,95;UBERON:0002346,2.05e-18,64;UBERON:0003075,2.05e-18,64;UBERON:0007284,2.05e-18,64;UBERON:0000073,5.98e-18,54;UBERON:0010371,1.38e-16,73;UBERON:0001049,2.15e-16,52;UBERON:0005068,2.15e-16,52;UBERON:0006241,2.15e-16,52;UBERON:0007135,2.15e-16,52;UBERON:0002020,4.89e-16,34;UBERON:0003056,1.72e-14,49;UBERON:0002780,1.07e-13,39;UBERON:0001890,1.07e-13,39;UBERON:0006240,1.07e-13,39;UBERON:0000955,2.69e-13,47;UBERON:0006238,2.69e-13,47;UBERON:0003080,5.82e-13,40;UBERON:0002616,7.35e-13,46;UBERON:0003528,2.14e-12,29;UBERON:0002791,2.14e-12,29;UBERON:0001893,2.14e-12,29;UBERON:0010314,6.97e-12,92;UBERON:0000956,9.52e-09,21;UBERON:0001869,9.52e-09,21;UBERON:0000203,9.52e-09,21 | |||
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| ||
|short_description=p3@Fam171a2 | |short_description=p3@Fam171a2 | ||
}} | }} |
Latest revision as of 18:33, 26 September 2015
Short description: | p3@Fam171a2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Fam171a2_5end |
Coexpression cluster: | MCL_coexpression_mm9:22 |
Association with transcript: | -3bp_to_ENSMUST00000152015_5end |
EntrezGene: | Fam171a2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 4.44e-19 | 33 |
neuronal stem cell | 4.44e-19 | 33 |
neuroblast | 4.44e-19 | 33 |
electrically signaling cell | 4.44e-19 | 33 |
ectodermal cell | 7.83e-18 | 44 |
neurectodermal cell | 7.83e-18 | 44 |
neural cell | 3.24e-17 | 43 |
electrically responsive cell | 5.74e-17 | 39 |
electrically active cell | 5.74e-17 | 39 |
CNS neuron (sensu Vertebrata) | 1.92e-16 | 23 |
neuroblast (sensu Vertebrata) | 1.92e-16 | 23 |
embryonic cell | 2.29e-07 | 70 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 3.23e-25 | 73 |
nervous system | 1.85e-24 | 75 |
ectoderm-derived structure | 1.34e-22 | 95 |
ectoderm | 1.34e-22 | 95 |
presumptive ectoderm | 1.34e-22 | 95 |
neurectoderm | 2.05e-18 | 64 |
neural plate | 2.05e-18 | 64 |
presumptive neural plate | 2.05e-18 | 64 |
regional part of nervous system | 5.98e-18 | 54 |
ecto-epithelium | 1.38e-16 | 73 |
neural tube | 2.15e-16 | 52 |
neural rod | 2.15e-16 | 52 |
future spinal cord | 2.15e-16 | 52 |
neural keel | 2.15e-16 | 52 |
gray matter | 4.89e-16 | 34 |
pre-chordal neural plate | 1.72e-14 | 49 |
regional part of forebrain | 1.07e-13 | 39 |
forebrain | 1.07e-13 | 39 |
future forebrain | 1.07e-13 | 39 |
brain | 2.69e-13 | 47 |
future brain | 2.69e-13 | 47 |
anterior neural tube | 5.82e-13 | 40 |
regional part of brain | 7.35e-13 | 46 |
brain grey matter | 2.14e-12 | 29 |
regional part of telencephalon | 2.14e-12 | 29 |
telencephalon | 2.14e-12 | 29 |
structure with developmental contribution from neural crest | 6.97e-12 | 92 |
cerebral cortex | 9.52e-09 | 21 |
cerebral hemisphere | 9.52e-09 | 21 |
pallium | 9.52e-09 | 21 |