FFCP PHASE1:Mm9::chr10:89208554..89208568,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=639 | |MCL_coexpression_id=639 | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:89208554..89208568,- | |||
|description=CAGE_peak_at_chr10:89208554..89208568,- | |description=CAGE_peak_at_chr10:89208554..89208568,- | ||
|id=chr10:89208554..89208568,- | |id=chr10:89208554..89208568,- | ||
|ontology_enrichment_celltype=CL:0000355!3.61e-07!9;CL:0000838!8.60e-07!12;CL:0000791!9.15e-07!9;CL:0000789!9.15e-07!9;CL:0002420!9.15e-07!9;CL:0002419!9.15e-07!9;CL:0000790!9.15e-07!9 | |ontology_enrichment_celltype=CL:0000355!3.61e-07!9;CL:0000838!8.60e-07!12;CL:0000791!9.15e-07!9;CL:0000789!9.15e-07!9;CL:0002420!9.15e-07!9;CL:0002419!9.15e-07!9;CL:0000790!9.15e-07!9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000355,2.39e-10,9;CL:0000034,6.99e-10,97;CL:0002320,5.03e-07,46;CL:0000134,5.03e-07,46;CL:0000723,5.76e-07,91;CL:0000048,5.76e-07,91;CL:0000988,6.76e-07,32;CL:0002032,6.76e-07,32;CL:0000037,6.76e-07,32;CL:0000837,6.76e-07,32 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2=DOID:0060100,2.12e-12,3;DOID:4045,2.12e-12,3 | |||
|ontology_enrichment_uberon=UBERON:0000383!6.60e-08!10;UBERON:0000914!1.00e-07!17;UBERON:0001134!3.61e-07!9;UBERON:0002036!3.61e-07!9;UBERON:0002385!3.61e-07!9;UBERON:0000486!3.61e-07!9;UBERON:0001015!3.61e-07!9;UBERON:0004290!3.61e-07!9;UBERON:0003082!3.61e-07!9;UBERON:0002329!8.80e-07!11;UBERON:0003077!8.80e-07!11;UBERON:0003059!8.80e-07!11;UBERON:0007282!8.80e-07!11;UBERON:0009618!8.80e-07!11;UBERON:0007285!8.80e-07!11 | |ontology_enrichment_uberon=UBERON:0000383!6.60e-08!10;UBERON:0000914!1.00e-07!17;UBERON:0001134!3.61e-07!9;UBERON:0002036!3.61e-07!9;UBERON:0002385!3.61e-07!9;UBERON:0000486!3.61e-07!9;UBERON:0001015!3.61e-07!9;UBERON:0004290!3.61e-07!9;UBERON:0003082!3.61e-07!9;UBERON:0002329!8.80e-07!11;UBERON:0003077!8.80e-07!11;UBERON:0003059!8.80e-07!11;UBERON:0007282!8.80e-07!11;UBERON:0009618!8.80e-07!11;UBERON:0007285!8.80e-07!11 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,2.39e-10,9;UBERON:0002036,2.39e-10,9;UBERON:0002385,2.39e-10,9;UBERON:0000486,2.39e-10,9;UBERON:0007503,2.39e-10,9;UBERON:0001015,2.39e-10,9;UBERON:0002329,2.39e-10,9;UBERON:0003082,2.39e-10,9;UBERON:0003059,2.39e-10,9;UBERON:0007282,2.39e-10,9;UBERON:0004290,2.39e-10,9;UBERON:0009618,2.39e-10,9;UBERON:0000383,2.70e-09,10;UBERON:0007524,1.97e-08,11;UBERON:0003077,1.97e-08,11;UBERON:0007285,1.97e-08,11;UBERON:0002384,5.03e-07,46 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,8.58811205125167,5.38348410540585,0.513653904676515,0.478632953972018,0.856003649656029,0.437102012094987,0,0,0,0,0.137114433605739,0,0,0.198581902401771,0,0.159992422793407,0,0,0,0.215471232685889,0,0,0.221730510655305,0,0.61506478758457,0,0,0.166234645358492,0,8.37063261473815,2.3440060335714,2.09409497589519,15.2940186888064,4.78131839470912,9.22469670759192,0.125896817975577,0.202753862439029,0.183546752161682,0,0,0.219686182734472,0,0,0,0.335565212115473,1.45072428402269,0.336093799142464,1.02903774414379,0.286533439938757,1.03134418455488,0,0,0,0,0,0.449949858640699,0,0,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.757261933331841,0.226714680320357,1.73918693221007,0.860423876981386,4.75979933595425,0,0.649776417447669,0,0.561777680527007,0.170430322578058,0,0,0,1.28326477414318,0,0,0,0,0,0.68510327831436,0,0.29688427812965,0,0,0.461230994512117,0.301445281105245,0.23517741427141,0.125666591329675,0.494389935468748,1.15679485535929,0,0.485300549842228,0.220841518460394,0.484875253135222,0,0,0,0,2.51611761462433,0,4.70159840170339,0,0,0,0,0,0,0.162241263067758,0.203678727700633,0.124406970610093,0,0.210441855886474,0,0,0,0,0.204109497453984,0,0,0.258703370739016,0,0,0,0,0,0,0,0,2.80885274925294,2.57347907114715,4.26245249093389,0.207125772535502,0,0,0,0,0,0,0,0,0.16455984991348,0.164167464079095,0.324275238183423,0.292399974850665,0.219550115291051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0.398282546508734,0,0,0,0.203651327845314,0.193952487167626,0,0,0,0,0,0,0,0,0.224862112384854,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0,0,0,0,0,0,0,0.780534591431195,0,0.44292937929755,0,0.163863314715738,0.172684981865896,0.289298117163023,0,0,0,0,0,0,0.491804836130026,0.504941854408746,0,0,0,0.238968797952552,0,0,0,0,0,0,0.283880170416537,0,0,0.164970122972535,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0,0.304464949114599,0,0.42366414172764,0,0,0.161464426695906,0.0603129249281559,0,0.164140899745061,0,0,0,0,0.185194527369712,0,0,0,2.88963330989554,1.53946597556024,2.48759952847963,0.954670618015114,0,0,0,0,0,0,0.247960367176008,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147689527174577,0.100966449948148,0.15241361331,0,0,0.0962118416403295,0,0.453460767230423,0,0.0897138566094757,0,0,0.375364950902364,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0.183843508450014,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147198920134397,0,0,0,0,0,0.0846146078916765,0,0,0.135804113845862,0,0,0,0,0,0,0,0,0,0.191288332068843,0.220591419119515,0.231867835620421 | |phase1_expression=0.320297694209588,0,0,0,0,0,0,0,8.58811205125167,5.38348410540585,0.513653904676515,0.478632953972018,0.856003649656029,0.437102012094987,0,0,0,0,0.137114433605739,0,0,0.198581902401771,0,0.159992422793407,0,0,0,0.215471232685889,0,0,0.221730510655305,0,0.61506478758457,0,0,0.166234645358492,0,8.37063261473815,2.3440060335714,2.09409497589519,15.2940186888064,4.78131839470912,9.22469670759192,0.125896817975577,0.202753862439029,0.183546752161682,0,0,0.219686182734472,0,0,0,0.335565212115473,1.45072428402269,0.336093799142464,1.02903774414379,0.286533439938757,1.03134418455488,0,0,0,0,0,0.449949858640699,0,0,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.757261933331841,0.226714680320357,1.73918693221007,0.860423876981386,4.75979933595425,0,0.649776417447669,0,0.561777680527007,0.170430322578058,0,0,0,1.28326477414318,0,0,0,0,0,0.68510327831436,0,0.29688427812965,0,0,0.461230994512117,0.301445281105245,0.23517741427141,0.125666591329675,0.494389935468748,1.15679485535929,0,0.485300549842228,0.220841518460394,0.484875253135222,0,0,0,0,2.51611761462433,0,4.70159840170339,0,0,0,0,0,0,0.162241263067758,0.203678727700633,0.124406970610093,0,0.210441855886474,0,0,0,0,0.204109497453984,0,0,0.258703370739016,0,0,0,0,0,0,0,0,2.80885274925294,2.57347907114715,4.26245249093389,0.207125772535502,0,0,0,0,0,0,0,0,0.16455984991348,0.164167464079095,0.324275238183423,0.292399974850665,0.219550115291051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0.398282546508734,0,0,0,0.203651327845314,0.193952487167626,0,0,0,0,0,0,0,0,0.224862112384854,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0,0,0,0,0,0,0,0.780534591431195,0,0.44292937929755,0,0.163863314715738,0.172684981865896,0.289298117163023,0,0,0,0,0,0,0.491804836130026,0.504941854408746,0,0,0,0.238968797952552,0,0,0,0,0,0,0.283880170416537,0,0,0.164970122972535,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0,0.304464949114599,0,0.42366414172764,0,0,0.161464426695906,0.0603129249281559,0,0.164140899745061,0,0,0,0,0.185194527369712,0,0,0,2.88963330989554,1.53946597556024,2.48759952847963,0.954670618015114,0,0,0,0,0,0,0.247960367176008,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147689527174577,0.100966449948148,0.15241361331,0,0,0.0962118416403295,0,0.453460767230423,0,0.0897138566094757,0,0,0.375364950902364,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0.183843508450014,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147198920134397,0,0,0,0,0,0.0846146078916765,0,0,0.135804113845862,0,0,0,0,0,0,0,0,0,0.191288332068843,0.220591419119515,0.231867835620421 | ||
|short_description=p@chr10:89208554..89208568,- | |short_description=p@chr10:89208554..89208568,- | ||
}} | }} |
Latest revision as of 00:26, 5 August 2015
Short description: | p@chr10:89208554..89208568, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:89208554..89208568, - |
Coexpression cluster: | MCL_coexpression_mm9:639 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi-potent skeletal muscle stem cell | 2.39e-10 | 9 |
stem cell | 6.99e-10 | 97 |
connective tissue cell | 5.03e-07 | 46 |
mesenchymal cell | 5.03e-07 | 46 |
somatic stem cell | 5.76e-07 | 91 |
multi fate stem cell | 5.76e-07 | 91 |
hematopoietic cell | 6.76e-07 | 32 |
hematopoietic oligopotent progenitor cell | 6.76e-07 | 32 |
hematopoietic stem cell | 6.76e-07 | 32 |
hematopoietic multipotent progenitor cell | 6.76e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 2.39e-10 | 9 |
striated muscle tissue | 2.39e-10 | 9 |
muscle tissue | 2.39e-10 | 9 |
multilaminar epithelium | 2.39e-10 | 9 |
epithelial vesicle | 2.39e-10 | 9 |
musculature | 2.39e-10 | 9 |
somite | 2.39e-10 | 9 |
myotome | 2.39e-10 | 9 |
presomitic mesoderm | 2.39e-10 | 9 |
presumptive segmental plate | 2.39e-10 | 9 |
dermomyotome | 2.39e-10 | 9 |
trunk paraxial mesoderm | 2.39e-10 | 9 |
musculature of body | 2.70e-09 | 10 |
dense mesenchyme tissue | 1.97e-08 | 11 |
paraxial mesoderm | 1.97e-08 | 11 |
presumptive paraxial mesoderm | 1.97e-08 | 11 |
connective tissue | 5.03e-07 | 46 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 2.12e-12 | 3 |
muscle cancer | 2.12e-12 | 3 |