FFCP PHASE1:Mm9::chr9:108392852..108392878,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=66 | |MCL_coexpression_id=66 | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr9:108392852..108392878,- | |||
|description=CAGE_peak_at_chr9:108392852..108392878,- | |description=CAGE_peak_at_chr9:108392852..108392878,- | ||
|id=chr9:108392852..108392878,- | |id=chr9:108392852..108392878,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000624,2.77e-12,8;CL:0000791,6.05e-11,9;CL:0000789,6.05e-11,9;CL:0002420,6.05e-11,9;CL:0002419,6.05e-11,9;CL:0000790,6.05e-11,9;CL:0000084,5.44e-09,11;CL:0000827,5.44e-09,11;CL:0000838,2.95e-08,12;CL:0000815,1.20e-07,1;CL:0000792,1.20e-07,1;CL:0000542,1.24e-07,13;CL:0000051,1.24e-07,13;CL:0000213,2.11e-07,1;CL:0002078,2.11e-07,1;CL:0000115,2.11e-07,1;CL:0002262,2.11e-07,1;CL:1000398,2.11e-07,1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2=DOID:0060100,7.10e-09,3;DOID:4045,7.10e-09,3 | |||
|ontology_enrichment_uberon=UBERON:0001242!5.24e-07!13;UBERON:0000060!5.24e-07!13;UBERON:0001262!5.24e-07!13;UBERON:0004786!5.24e-07!13;UBERON:0000485!5.50e-07!11;UBERON:0000344!8.80e-07!15 | |ontology_enrichment_uberon=UBERON:0001242!5.24e-07!13;UBERON:0000060!5.24e-07!13;UBERON:0001262!5.24e-07!13;UBERON:0004786!5.24e-07!13;UBERON:0000485!5.50e-07!11;UBERON:0000344!8.80e-07!15 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002394,2.11e-07,1;UBERON:0001281,2.11e-07,1;UBERON:0000353,2.11e-07,1;UBERON:0003497,2.11e-07,1;UBERON:0003909,2.11e-07,1;UBERON:0003928,2.11e-07,1;UBERON:0003835,2.11e-07,1;UBERON:0003513,2.11e-07,1;UBERON:0001280,2.11e-07,1;UBERON:0004647,2.11e-07,1;UBERON:0002294,2.11e-07,1;UBERON:0001173,2.11e-07,1;UBERON:0004912,2.11e-07,1;UBERON:0005171,2.11e-07,1;UBERON:0001153,4.21e-07,1;UBERON:0001045,4.21e-07,1 | |||
|phase1_expression=0.640595388419176,0.697950815278722,0.454999239389536,1.20985684522732,1.50268718983904,0.671517087647559,0,6.06879620175408,0.985521055061667,0.936258105287974,0,0,3.42401459862411,2.01066925563694,0,0,0,0.157731082679119,0.274228867211478,0,0,0.496454756004426,0.261199789138935,0,0.45881856213434,0,0.430761996159075,0.430942465371778,0,0.504060259519861,0.443461021310609,0.635030673459631,0,0,0.866554859253824,0.498703936075477,2.24586291888606,2.09265815368454,0.7813353445238,2.09409497589519,2.35292595212406,4.09827290975067,0.971020706062307,0,0.101376931219515,0,0.782391344348039,0,0,0,0.139986421625363,0,0.335565212115473,1.45072428402269,0.672187598284928,0,0,0.515672092277442,0.404632921719196,0.528990979272033,0,0,0,0,0,0,0,0,0,0.135005938331691,0,0,0.220868540951614,0.244981598429908,0.0958454710182364,0,0,0.127687338085188,0,0.131886287730194,0.182975287204819,0.52091337055676,0,0,0,0,0.142371680799103,0.186399445825301,0.151452386666368,0.0755715601067855,2.31891590961342,0,0,0,0,0,0,0.170430322578058,0,0,0.14084341977668,0,0,0,0,0.253359865475099,0,0.11418387971906,0.258937883647172,0.148442139064825,0,0,0.230615497256059,0,0,0,0,0,0,0,0,0,1.86391761218122,0.292780797011547,0.628340120440365,0,0.11981512450592,0,0.635351135365324,0.149790639404823,0,0.125654352112864,0,0,0,0.162241263067758,0,0,0,0,0,0.459804208866946,0.180062129805349,0,0.136072998302656,0.12811372028485,0.187403449119458,0,0,0,0,0,0,0.348252166522167,0,0,0,0,0.284163499395593,0,0,0,0,0.196764231747404,0,0,0.268273401399619,0,0,0,0.162137619091711,0,0,0.134206418760372,0.210289948564127,0,0.330418782983798,0.264450566663544,0,0,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0,0.189667900953082,0,1.1270773567308,0.203651327845314,0.193952487167626,0,0.0632365371242573,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238043640886014,0,0,0,0.159454768657487,0,0,0.144649058581512,0,0,0,0,0.160550589987792,0.234423373184406,0,0,0.315508219416257,0,0.215423397732799,0.238968797952552,0,0.283076530788832,0,0.292255857911312,0,0,0,0,0,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0.517434735131018,0,0,0,0.329098041204242,0,0.23467170806371,0.21183207086382,0.441056796109924,0,0,0,0.358117032009409,0,0,0,0,0.206386867963223,0,0,0,0,0.509935289981566,0.419854356970974,0.552799895217695,0,0,0.203319467126849,0,0,0,0,0.0826534557253359,0,0,0.621339313086926,0,0,0.165458490457098,0,0.129159823477731,0,0,0.2604087696879,0.209718688851422,0.241584120826006,0,0,0,0,0,0,0,0,0.147689527174577,0.100966449948148,0.15241361331,0,0.0974578807397524,0.0962118416403295,0.350630706544707,0,0,0.179427713218951,0,0.19318959403219,0,0,0.214368379079066,0,0,0,0,0,0,0.755393897389701,0,0,0,1.55328093525546,0,0.399024873401031,0.341467211508268,0,0.209613162627982,0,0.222246727801615,0,0,0,0,0,0,0.0640251524048693,0.0574354689556133,0,0,0,0,0,0.342869252385415,0,0,0.145346416632329,0,0.0846146078916765,0,0,0.135804113845862,0,0,0,0,0.154936841185966,0.192906610981141,0.249810577937946,0,0,0,0.220591419119515,0 | |phase1_expression=0.640595388419176,0.697950815278722,0.454999239389536,1.20985684522732,1.50268718983904,0.671517087647559,0,6.06879620175408,0.985521055061667,0.936258105287974,0,0,3.42401459862411,2.01066925563694,0,0,0,0.157731082679119,0.274228867211478,0,0,0.496454756004426,0.261199789138935,0,0.45881856213434,0,0.430761996159075,0.430942465371778,0,0.504060259519861,0.443461021310609,0.635030673459631,0,0,0.866554859253824,0.498703936075477,2.24586291888606,2.09265815368454,0.7813353445238,2.09409497589519,2.35292595212406,4.09827290975067,0.971020706062307,0,0.101376931219515,0,0.782391344348039,0,0,0,0.139986421625363,0,0.335565212115473,1.45072428402269,0.672187598284928,0,0,0.515672092277442,0.404632921719196,0.528990979272033,0,0,0,0,0,0,0,0,0,0.135005938331691,0,0,0.220868540951614,0.244981598429908,0.0958454710182364,0,0,0.127687338085188,0,0.131886287730194,0.182975287204819,0.52091337055676,0,0,0,0,0.142371680799103,0.186399445825301,0.151452386666368,0.0755715601067855,2.31891590961342,0,0,0,0,0,0,0.170430322578058,0,0,0.14084341977668,0,0,0,0,0.253359865475099,0,0.11418387971906,0.258937883647172,0.148442139064825,0,0,0.230615497256059,0,0,0,0,0,0,0,0,0,1.86391761218122,0.292780797011547,0.628340120440365,0,0.11981512450592,0,0.635351135365324,0.149790639404823,0,0.125654352112864,0,0,0,0.162241263067758,0,0,0,0,0,0.459804208866946,0.180062129805349,0,0.136072998302656,0.12811372028485,0.187403449119458,0,0,0,0,0,0,0.348252166522167,0,0,0,0,0.284163499395593,0,0,0,0,0.196764231747404,0,0,0.268273401399619,0,0,0,0.162137619091711,0,0,0.134206418760372,0.210289948564127,0,0.330418782983798,0.264450566663544,0,0,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0,0.189667900953082,0,1.1270773567308,0.203651327845314,0.193952487167626,0,0.0632365371242573,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238043640886014,0,0,0,0.159454768657487,0,0,0.144649058581512,0,0,0,0,0.160550589987792,0.234423373184406,0,0,0.315508219416257,0,0.215423397732799,0.238968797952552,0,0.283076530788832,0,0.292255857911312,0,0,0,0,0,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0.517434735131018,0,0,0,0.329098041204242,0,0.23467170806371,0.21183207086382,0.441056796109924,0,0,0,0.358117032009409,0,0,0,0,0.206386867963223,0,0,0,0,0.509935289981566,0.419854356970974,0.552799895217695,0,0,0.203319467126849,0,0,0,0,0.0826534557253359,0,0,0.621339313086926,0,0,0.165458490457098,0,0.129159823477731,0,0,0.2604087696879,0.209718688851422,0.241584120826006,0,0,0,0,0,0,0,0,0.147689527174577,0.100966449948148,0.15241361331,0,0.0974578807397524,0.0962118416403295,0.350630706544707,0,0,0.179427713218951,0,0.19318959403219,0,0,0.214368379079066,0,0,0,0,0,0,0.755393897389701,0,0,0,1.55328093525546,0,0.399024873401031,0.341467211508268,0,0.209613162627982,0,0.222246727801615,0,0,0,0,0,0,0.0640251524048693,0.0574354689556133,0,0,0,0,0,0.342869252385415,0,0,0.145346416632329,0,0.0846146078916765,0,0,0.135804113845862,0,0,0,0,0.154936841185966,0.192906610981141,0.249810577937946,0,0,0,0.220591419119515,0 | ||
|short_description=p@chr9:108392852..108392878,- | |short_description=p@chr9:108392852..108392878,- | ||
}} | }} |
Latest revision as of 13:47, 4 August 2015
Short description: | p@chr9:108392852..108392878, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr9:108392852..108392878, - |
Coexpression cluster: | MCL_coexpression_mm9:66 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD4-positive, alpha-beta T cell | 2.77e-12 | 8 |
mature alpha-beta T cell | 6.05e-11 | 9 |
alpha-beta T cell | 6.05e-11 | 9 |
immature T cell | 6.05e-11 | 9 |
mature T cell | 6.05e-11 | 9 |
immature alpha-beta T cell | 6.05e-11 | 9 |
T cell | 5.44e-09 | 11 |
pro-T cell | 5.44e-09 | 11 |
lymphoid lineage restricted progenitor cell | 2.95e-08 | 12 |
regulatory T cell | 1.20e-07 | 1 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 1.20e-07 | 1 |
lymphocyte | 1.24e-07 | 13 |
common lymphoid progenitor | 1.24e-07 | 13 |
lining cell | 2.11e-07 | 1 |
meso-epithelial cell | 2.11e-07 | 1 |
endothelial cell | 2.11e-07 | 1 |
endothelial cell of sinusoid | 2.11e-07 | 1 |
endothelial cell of hepatic sinusoid | 2.11e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
bile duct | 2.11e-07 | 1 |
hepatic sinusoid | 2.11e-07 | 1 |
parenchyma | 2.11e-07 | 1 |
abdomen blood vessel | 2.11e-07 | 1 |
sinusoid | 2.11e-07 | 1 |
digestive system duct | 2.11e-07 | 1 |
abdominal segment blood vessel | 2.11e-07 | 1 |
trunk blood vessel | 2.11e-07 | 1 |
liver parenchyma | 2.11e-07 | 1 |
liver lobule | 2.11e-07 | 1 |
biliary system | 2.11e-07 | 1 |
biliary tree | 2.11e-07 | 1 |
biliary bud | 2.11e-07 | 1 |
hepatic duct | 2.11e-07 | 1 |
caecum | 4.21e-07 | 1 |
midgut | 4.21e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 7.10e-09 | 3 |
muscle cancer | 7.10e-09 | 3 |