FFCP PHASE1:Mm9::chr13:113257070..113257088,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=63 | |MCL_coexpression_id=63 | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:113257070..113257088,+ | |||
|description=CAGE_peak_at_chr13:113257070..113257088,+ | |description=CAGE_peak_at_chr13:113257070..113257088,+ | ||
|id=chr13:113257070..113257088,+ | |id=chr13:113257070..113257088,+ | ||
|ontology_enrichment_celltype=CL:0000791!1.05e-12!9;CL:0000789!1.05e-12!9;CL:0002420!1.05e-12!9;CL:0002419!1.05e-12!9;CL:0000790!1.05e-12!9;CL:0000624!1.71e-11!8;CL:0000838!1.03e-10!12;CL:0000084!6.03e-10!11;CL:0000827!6.03e-10!11;CL:0000542!1.11e-09!13;CL:0000051!1.11e-09!13;CL:0000893!8.52e-09!6;CL:0002489!8.52e-09!6;CL:0000898!8.52e-09!6;CL:0000809!8.52e-09!6;CL:0000810!8.52e-09!6;CL:0000895!8.52e-09!6;CL:0000808!8.52e-09!6;CL:0000894!8.52e-09!6;CL:0000806!8.52e-09!6;CL:0000807!8.52e-09!6;CL:0000805!8.52e-09!6;CL:0002425!8.52e-09!6;CL:0002436!8.52e-09!6;CL:0002427!8.52e-09!6;CL:0002428!8.52e-09!6;CL:0002429!8.52e-09!6;CL:0002433!8.52e-09!6;CL:0002431!8.52e-09!6;CL:0002432!8.52e-09!6;CL:0000222!8.56e-08!7;CL:0000738!8.71e-07!17;CL:0002087!8.71e-07!17 | |ontology_enrichment_celltype=CL:0000791!1.05e-12!9;CL:0000789!1.05e-12!9;CL:0002420!1.05e-12!9;CL:0002419!1.05e-12!9;CL:0000790!1.05e-12!9;CL:0000624!1.71e-11!8;CL:0000838!1.03e-10!12;CL:0000084!6.03e-10!11;CL:0000827!6.03e-10!11;CL:0000542!1.11e-09!13;CL:0000051!1.11e-09!13;CL:0000893!8.52e-09!6;CL:0002489!8.52e-09!6;CL:0000898!8.52e-09!6;CL:0000809!8.52e-09!6;CL:0000810!8.52e-09!6;CL:0000895!8.52e-09!6;CL:0000808!8.52e-09!6;CL:0000894!8.52e-09!6;CL:0000806!8.52e-09!6;CL:0000807!8.52e-09!6;CL:0000805!8.52e-09!6;CL:0002425!8.52e-09!6;CL:0002436!8.52e-09!6;CL:0002427!8.52e-09!6;CL:0002428!8.52e-09!6;CL:0002429!8.52e-09!6;CL:0002433!8.52e-09!6;CL:0002431!8.52e-09!6;CL:0002432!8.52e-09!6;CL:0000222!8.56e-08!7;CL:0000738!8.71e-07!17;CL:0002087!8.71e-07!17 | ||
|ontology_enrichment_celltype_v019_2=CL:0000624,3.61e-15,8;CL:0000791,1.61e-13,9;CL:0000789,1.61e-13,9;CL:0002420,1.61e-13,9;CL:0002419,1.61e-13,9;CL:0000790,1.61e-13,9;CL:0000084,4.07e-11,11;CL:0000827,4.07e-11,11;CL:0000192,1.42e-10,3;CL:0000359,1.42e-10,3;CL:0002539,1.42e-10,3;CL:0000514,1.42e-10,3;CL:0000838,3.26e-10,12;CL:0000222,4.99e-10,7;CL:0000542,1.90e-09,13;CL:0000051,1.90e-09,13;CL:0000213,7.41e-09,1;CL:0002078,7.41e-09,1;CL:0000115,7.41e-09,1;CL:0002262,7.41e-09,1;CL:1000398,7.41e-09,1;CL:0000815,1.24e-08,1;CL:0000792,1.24e-08,1;CL:0000738,2.81e-07,17;CL:0002087,2.81e-07,17 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!1.14e-09!88;UBERON:0000055!2.86e-08!5;UBERON:0001981!2.86e-08!5;UBERON:0002049!2.86e-08!5;UBERON:0007500!2.86e-08!5;UBERON:0007798!2.86e-08!5;UBERON:0004537!2.86e-08!5;UBERON:0006965!2.86e-08!5;UBERON:0007023!2.53e-07!51;UBERON:0000161!2.77e-07!5;UBERON:0000914!6.21e-07!17;UBERON:0000947!7.41e-07!4;UBERON:0001637!7.41e-07!4;UBERON:0003509!7.41e-07!4;UBERON:0004573!7.41e-07!4;UBERON:0004571!7.41e-07!4;UBERON:0010191!7.41e-07!4;UBERON:0004572!7.41e-07!4;UBERON:0004177!8.17e-07!29 | |ontology_enrichment_uberon=UBERON:0003081!1.14e-09!88;UBERON:0000055!2.86e-08!5;UBERON:0001981!2.86e-08!5;UBERON:0002049!2.86e-08!5;UBERON:0007500!2.86e-08!5;UBERON:0007798!2.86e-08!5;UBERON:0004537!2.86e-08!5;UBERON:0006965!2.86e-08!5;UBERON:0007023!2.53e-07!51;UBERON:0000161!2.77e-07!5;UBERON:0000914!6.21e-07!17;UBERON:0000947!7.41e-07!4;UBERON:0001637!7.41e-07!4;UBERON:0003509!7.41e-07!4;UBERON:0004573!7.41e-07!4;UBERON:0004571!7.41e-07!4;UBERON:0010191!7.41e-07!4;UBERON:0004572!7.41e-07!4;UBERON:0004177!8.17e-07!29 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000055,1.44e-23,5;UBERON:0007500,1.44e-23,5;UBERON:0001981,1.44e-23,5;UBERON:0002049,1.44e-23,5;UBERON:0007798,1.44e-23,5;UBERON:0004537,1.44e-23,5;UBERON:0006965,1.44e-23,5;UBERON:0000947,8.26e-17,4;UBERON:0001637,8.26e-17,4;UBERON:0004573,8.26e-17,4;UBERON:0003509,8.26e-17,4;UBERON:0004571,8.26e-17,4;UBERON:0010191,8.26e-17,4;UBERON:0004572,8.26e-17,4;UBERON:0001135,1.42e-10,3;UBERON:0004237,1.42e-10,3;UBERON:0004695,1.42e-10,3;UBERON:0002111,1.42e-10,3;UBERON:0004178,1.42e-10,3;UBERON:0000029,4.39e-09,1;UBERON:0001097,4.39e-09,1;UBERON:0003968,4.39e-09,1;UBERON:0001467,4.39e-09,1;UBERON:0002394,7.41e-09,1;UBERON:0001281,7.41e-09,1;UBERON:0000353,7.41e-09,1;UBERON:0003497,7.41e-09,1;UBERON:0003909,7.41e-09,1;UBERON:0003928,7.41e-09,1;UBERON:0003835,7.41e-09,1;UBERON:0003513,7.41e-09,1;UBERON:0001280,7.41e-09,1;UBERON:0004647,7.41e-09,1;UBERON:0002294,7.41e-09,1;UBERON:0001173,7.41e-09,1;UBERON:0004912,7.41e-09,1;UBERON:0005171,7.41e-09,1;UBERON:0001723,2.89e-08,1;UBERON:0001033,2.89e-08,1;UBERON:0010056,2.89e-08,1 | |||
|phase1_expression=0,0,0,0,0,0,0,2.1950964985068,5.06839399746,4.91535505276186,0.68487187290202,0.159544317990673,0.856003649656029,0.699363219351979,0,0,0,0,0.274228867211478,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.26614272356039,1.4192770370732,0.734187008646726,0,0,0,0,0,0,0.167782606057736,1.45072428402269,0.672187598284928,0,0.85960031981627,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30559649555362,0,0,0,0,0,4.34796733052517,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0,15.5362730188303,0,0,0,0,0,0.117588707135705,0,0,1.73519228303894,3.5384422077995,0,0.220841518460394,0.484875253135222,0,0,0,0,0,0,0.127070227073065,0,0,0,0,0,0,0,0,0.373220911830279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.268273401399619,0,0,0,0,0.146199987425332,0,0.134206418760372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0,0,0,0,0,0,0,0,0.147610147979602,0,0,0.296452627087149,0,0,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0.275936746304732,0.160550589987792,0.234423373184406,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.659880491890142,0,0,0,0,0,0,0.258428293168221,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0.21183207086382,0.441056796109924,0.16488625294148,0,0.0603129249281559,0,0,0.291480836629851,0,0.341741761595705,0,0,0,0.546776910884101,0.457556346413045,0,0,0,0.954670618015114,0,0,0,0,0,0,0,0,0.129614973291793,0.621339313086926,0,0,0,0,0,0,0,0,0.104859344425711,0,0,1.89606672376907,0,0,0,0,0.198681354781265,0.120195449519969,0,0,0,0,0.292373642219257,0.192423683280659,0.116876902181569,1.13365191807606,0,0,0,0.579568782096571,0.563047426353546,0.549454872801795,0.428736758158132,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0,0,0.0640251524048693,0,0,0.115884325944855,0,0,0,0,0,0,0,0,0,0,0,0.135804113845862,0,0,0,0.409231043169689,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,2.1950964985068,5.06839399746,4.91535505276186,0.68487187290202,0.159544317990673,0.856003649656029,0.699363219351979,0,0,0,0,0.274228867211478,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.26614272356039,1.4192770370732,0.734187008646726,0,0,0,0,0,0,0.167782606057736,1.45072428402269,0.672187598284928,0,0.85960031981627,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30559649555362,0,0,0,0,0,4.34796733052517,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0,15.5362730188303,0,0,0,0,0,0.117588707135705,0,0,1.73519228303894,3.5384422077995,0,0.220841518460394,0.484875253135222,0,0,0,0,0,0,0.127070227073065,0,0,0,0,0,0,0,0,0.373220911830279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.268273401399619,0,0,0,0,0.146199987425332,0,0.134206418760372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0,0,0,0,0,0,0,0,0.147610147979602,0,0,0.296452627087149,0,0,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0.275936746304732,0.160550589987792,0.234423373184406,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.659880491890142,0,0,0,0,0,0,0.258428293168221,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0.21183207086382,0.441056796109924,0.16488625294148,0,0.0603129249281559,0,0,0.291480836629851,0,0.341741761595705,0,0,0,0.546776910884101,0.457556346413045,0,0,0,0.954670618015114,0,0,0,0,0,0,0,0,0.129614973291793,0.621339313086926,0,0,0,0,0,0,0,0,0.104859344425711,0,0,1.89606672376907,0,0,0,0,0.198681354781265,0.120195449519969,0,0,0,0,0.292373642219257,0.192423683280659,0.116876902181569,1.13365191807606,0,0,0,0.579568782096571,0.563047426353546,0.549454872801795,0.428736758158132,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0,0,0.0640251524048693,0,0,0.115884325944855,0,0,0,0,0,0,0,0,0,0,0,0.135804113845862,0,0,0,0.409231043169689,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr13:113257070..113257088,+ | |short_description=p@chr13:113257070..113257088,+ | ||
}} | }} |
Latest revision as of 14:53, 5 August 2015
Short description: | p@chr13:113257070..113257088, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:113257070..113257088, + |
Coexpression cluster: | MCL_coexpression_mm9:63 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD4-positive, alpha-beta T cell | 3.61e-15 | 8 |
mature alpha-beta T cell | 1.61e-13 | 9 |
alpha-beta T cell | 1.61e-13 | 9 |
immature T cell | 1.61e-13 | 9 |
mature T cell | 1.61e-13 | 9 |
immature alpha-beta T cell | 1.61e-13 | 9 |
T cell | 4.07e-11 | 11 |
pro-T cell | 4.07e-11 | 11 |
smooth muscle cell | 1.42e-10 | 3 |
vascular associated smooth muscle cell | 1.42e-10 | 3 |
aortic smooth muscle cell | 1.42e-10 | 3 |
smooth muscle myoblast | 1.42e-10 | 3 |
lymphoid lineage restricted progenitor cell | 3.26e-10 | 12 |
mesodermal cell | 4.99e-10 | 7 |
lymphocyte | 1.90e-09 | 13 |
common lymphoid progenitor | 1.90e-09 | 13 |
lining cell | 7.41e-09 | 1 |
meso-epithelial cell | 7.41e-09 | 1 |
endothelial cell | 7.41e-09 | 1 |
endothelial cell of sinusoid | 7.41e-09 | 1 |
endothelial cell of hepatic sinusoid | 7.41e-09 | 1 |
regulatory T cell | 1.24e-08 | 1 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 1.24e-08 | 1 |
leukocyte | 2.81e-07 | 17 |
nongranular leukocyte | 2.81e-07 | 17 |