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FFCP PHASE1:Mm9::chrX:20265684..20265696,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=18555
|EntrezGene=18555
|HGNC=
|HGNC=
|MCL_coexpression_id=60
|MCL_coexpression_id=60
|TSSclassifier=NA
|UniProt=Q04735,Q543G3
|UniProt=Q04735,Q543G3
|association_with_transcript=65bp_to_NM_011049,uc009sto.1_5end
|association_with_transcript=65bp_to_NM_011049,uc009sto.1_5end
|cluster_id=chrX:20265684..20265696,+
|description=CAGE_peak_4_at_Cdk16_5end
|description=CAGE_peak_4_at_Cdk16_5end
|id=chrX:20265684..20265696,+
|id=chrX:20265684..20265696,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!1.25e-13!75;UBERON:0001016!1.25e-13!75;UBERON:0004121!9.98e-13!102;UBERON:0000924!9.98e-13!102;UBERON:0006601!9.98e-13!102;UBERON:0001017!1.21e-12!73;UBERON:0005743!1.21e-12!73;UBERON:0002346!2.84e-12!71;UBERON:0003075!2.84e-12!71;UBERON:0007284!2.84e-12!71;UBERON:0001049!4.08e-11!52;UBERON:0005068!4.08e-11!52;UBERON:0006241!4.08e-11!52;UBERON:0007135!4.08e-11!52;UBERON:0000955!9.94e-11!50;UBERON:0006238!9.94e-11!50;UBERON:0002616!3.03e-10!49;UBERON:0000033!4.11e-10!63;UBERON:0003103!5.04e-08!43;UBERON:0002021!7.28e-08!10;UBERON:0000411!7.28e-08!10;UBERON:0001950!7.28e-08!10;UBERON:0002020!1.05e-07!34
|ontology_enrichment_uberon=UBERON:0000073!1.25e-13!75;UBERON:0001016!1.25e-13!75;UBERON:0004121!9.98e-13!102;UBERON:0000924!9.98e-13!102;UBERON:0006601!9.98e-13!102;UBERON:0001017!1.21e-12!73;UBERON:0005743!1.21e-12!73;UBERON:0002346!2.84e-12!71;UBERON:0003075!2.84e-12!71;UBERON:0007284!2.84e-12!71;UBERON:0001049!4.08e-11!52;UBERON:0005068!4.08e-11!52;UBERON:0006241!4.08e-11!52;UBERON:0007135!4.08e-11!52;UBERON:0000955!9.94e-11!50;UBERON:0006238!9.94e-11!50;UBERON:0002616!3.03e-10!49;UBERON:0000033!4.11e-10!63;UBERON:0003103!5.04e-08!43;UBERON:0002021!7.28e-08!10;UBERON:0000411!7.28e-08!10;UBERON:0001950!7.28e-08!10;UBERON:0002020!1.05e-07!34
|ontology_enrichment_uberon_v019_2=UBERON:0010314,3.15e-18,92;UBERON:0001016,1.39e-17,75;UBERON:0001017,3.66e-16,73;UBERON:0000073,3.71e-16,54;UBERON:0001049,7.17e-15,52;UBERON:0005068,7.17e-15,52;UBERON:0006241,7.17e-15,52;UBERON:0007135,7.17e-15,52;UBERON:0000955,6.55e-13,47;UBERON:0006238,6.55e-13,47;UBERON:0002616,3.24e-12,46;UBERON:0004121,7.14e-12,95;UBERON:0000924,7.14e-12,95;UBERON:0006601,7.14e-12,95;UBERON:0002346,2.39e-11,64;UBERON:0003075,2.39e-11,64;UBERON:0007284,2.39e-11,64;UBERON:0002021,3.79e-11,10;UBERON:0000411,3.79e-11,10;UBERON:0001950,3.79e-11,10;UBERON:0002020,5.13e-11,34;UBERON:0002619,1.27e-09,17;UBERON:0003080,2.26e-09,40;UBERON:0003528,2.73e-09,29;UBERON:0002791,2.73e-09,29;UBERON:0001893,2.73e-09,29;UBERON:0010371,4.65e-09,73;UBERON:0000025,4.85e-09,114;UBERON:0002780,1.04e-08,39;UBERON:0001890,1.04e-08,39;UBERON:0006240,1.04e-08,39;UBERON:0000956,2.87e-08,21;UBERON:0001869,2.87e-08,21;UBERON:0000203,2.87e-08,21;UBERON:0004111,6.73e-08,122;UBERON:0003056,1.57e-07,49;UBERON:0003076,6.54e-07,12;UBERON:0003057,6.54e-07,12
|phase1_expression=1.28119077683835,0.348975407639361,1.81999695755814,0.60492842261366,0,0,0,0.129123323441576,0.84473233291,0.234064526321993,0.171217968225505,0.239316476986009,0,0.0874204024189974,0,0,0,0,0,0,6.63337663178344,0.0992909512008853,0,0.319984845586813,0.45881856213434,0,0,0.430942465371778,0.190023419456374,0,0.221730510655305,0,0,0,0,0.166234645358492,0.204169356262369,0,0,0,0,0,0,0.629484089877886,0.912392380975631,2.0190142737785,1.56478268869608,0.872100625521786,3.29529274101708,1.55543919259427,1.81982348112971,0,0,0,0.336093799142464,1.54355661621568,0.286533439938757,2.06268836910977,0.809265843438391,0,0,1.69422266034566,1.77858959222228,1.7997994345628,0.988866362566974,1.4209602298922,1.49800055259202,1.92109152660777,0.207379224616955,0.270011876663381,0,3.99911378165325,2.87129103237098,0.122490799214954,0.287536413054709,0,2.20231761998777,6.00130489000382,5.83704826373725,0.791317726381163,1.18933936683133,0,5.30447698102624,2.25105044012672,2.75036845998258,1.76777151284201,2.27794689278565,0.931997229126503,3.10477392666055,7.40601289046498,0.289864488701678,0,5.439770669662,0,0,0,0.702222100658759,0.511290967734173,1.29893002301434,0.35333957451034,0.422530259330042,0,0,0,3.46385665617943,2.78695852022608,3.0331466700887,0.45673551887624,0,2.22663208597237,0.520455980298408,1.82679286987285,1.15307748628029,0.753613202763113,1.76383060703557,1.0053327306374,0.988779870937496,0.289198713839823,0,1.29413479957927,0.441683036920787,0.969750506270444,0,5.5628351432194,5.02672096352292,0,0.838705871541442,1.19980546198682,0.762421362438388,5.54225365797844,3.20250421973039,0.376963056338593,8.16974304903699,12.2743419518559,4.57133698031032,5.353961681236,1.12023300235348,0,0.758168275301024,0.210441855886474,0.390361328888111,0.459804208866946,0.540186389416048,0.753524089178575,1.7009124787832,0.640568601424249,0.655912071918102,1.81092359517311,0.431135985865684,0.756424320671277,0.175951124163949,0.219195732427575,0.278047249225598,1.39300866608867,0.411564272815887,0,0.702213187313235,0.772043721344145,1.13665399758237,1.03562886267751,0.469052119962192,0.720248245844059,1.18372367792605,0.983821158737019,1.69693824176116,2.32533944750408,2.68273401399619,3.38619492864792,2.63295759861569,3.11918181750281,4.62092214411378,5.26319954731196,5.04965265169416,4.42881181909227,2.52347938276953,1.13195073617213,0,0.264450566663544,0.639864751605702,0,0.38660238396628,0.605050573870028,0.444756087689741,0.190225626112559,0,0.329397909448022,0,0.596869416123452,0.58489226135736,0,0.216138049874694,0,0.569003702859245,0.342745537829186,1.1270773567308,0.407302655690628,0.581857461502877,1.26244475802573,0.822074982615345,0.147610147979602,0.627994911365499,0.740382983530803,0,0.166845105716094,0,0,0.202860121388503,0,0,0,0.486405680325106,0,0,0,0.312037673114561,0.252578877947112,0,0,0.369506380333209,0.189491411770485,0.325929952884052,0.169745085775188,0,0,0.238043640886014,1.56106918286239,0,0,0.478364305972461,0.327726629431476,0.172684981865896,0.144649058581512,0,0,0,0,10.1146871692309,10.0802050469295,3.77050374366353,0.757412781613119,0.94652465824877,0.390438744296638,0.646270193198397,0.955875191810208,2.22798674082394,0,1.21443210502468,0.584511715822624,1.97643888973262,4.81981974632711,1.70328102249922,0.35613120733451,0.81443479676788,0.329940245945071,0,0,0.302323556964751,0,0.295301892880773,0.307435147943927,1.03371317267288,0.363533729477506,0.712994756769443,0.316036757935816,0,0,0,0.18006109403131,0.258717367565509,0.643011105094777,0.354680467284547,0.713475270408282,1.64549020602121,3.34911444026059,2.11204537257339,0.847328283455281,0.220528398054962,0.49465875882444,0.484393280087717,0.422190474497091,0.238744688006273,0.164140899745061,0,10.9400928186201,0.170870880797853,0.206386867963223,0.185194527369712,0.188368457004691,0.136694227721025,0,1.86976272993241,1.25956307091292,1.79659965945751,0,0.632671987162271,0.406638934253697,0.216010681643603,0.209088296014469,0,0.269728692769641,0.247960367176008,0.26175594198403,0,0,25.9298751794728,0.448549638131936,0.66183396182839,0.972255941720238,0.516639293910924,0.675824501963113,0.469428954583016,1.43224823328345,1.78260885523708,0.241584120826006,2.88030006257865,0,0,0,0.25984164595559,0.179026695667481,0.198681354781265,0,0,0.100966449948148,0.15241361331,0,0,0,0,0.906921534460845,0,0.448569283047378,0.335769232728157,0.772758376128762,1.87682475451182,0.36630324853453,0.428736758158132,0.501572104035363,11.2950368523413,7.82552902062201,8.59343270159095,9.6237782112465,7.53590771747707,12.8416962556249,7.42524750254986,4.5032120322422,7.70342095273148,8.80192529978094,0.62272408550506,0,0.853668028770671,0.486213434136588,0.838452650511929,1.10306105070008,0.666740183404846,1.03017528619447,0.962757628775446,0.758091635291392,1.2673964994512,1.13175804831646,0.655490552289177,0.960377286073039,1.09127391015665,0,0.927074607558844,0.77163688185482,0.824171801606613,1.03039244094078,0,0.532427418478012,0.953744759789284,0.145346416632329,0.0941093804153306,0.592302255241736,0.548783918618318,0.789209134313529,0.271608227691724,1.68342681497322,0.118635018124174,0.394017929502254,0.818462086339379,0.929621047115796,0.578719832943424,1.74867404556562,1.16965804222704,0.859484216193193,3.44318997723918,1.76473135295612,0.463735671240843
|phase1_expression=1.28119077683835,0.348975407639361,1.81999695755814,0.60492842261366,0,0,0,0.129123323441576,0.84473233291,0.234064526321993,0.171217968225505,0.239316476986009,0,0.0874204024189974,0,0,0,0,0,0,6.63337663178344,0.0992909512008853,0,0.319984845586813,0.45881856213434,0,0,0.430942465371778,0.190023419456374,0,0.221730510655305,0,0,0,0,0.166234645358492,0.204169356262369,0,0,0,0,0,0,0.629484089877886,0.912392380975631,2.0190142737785,1.56478268869608,0.872100625521786,3.29529274101708,1.55543919259427,1.81982348112971,0,0,0,0.336093799142464,1.54355661621568,0.286533439938757,2.06268836910977,0.809265843438391,0,0,1.69422266034566,1.77858959222228,1.7997994345628,0.988866362566974,1.4209602298922,1.49800055259202,1.92109152660777,0.207379224616955,0.270011876663381,0,3.99911378165325,2.87129103237098,0.122490799214954,0.287536413054709,0,2.20231761998777,6.00130489000382,5.83704826373725,0.791317726381163,1.18933936683133,0,5.30447698102624,2.25105044012672,2.75036845998258,1.76777151284201,2.27794689278565,0.931997229126503,3.10477392666055,7.40601289046498,0.289864488701678,0,5.439770669662,0,0,0,0.702222100658759,0.511290967734173,1.29893002301434,0.35333957451034,0.422530259330042,0,0,0,3.46385665617943,2.78695852022608,3.0331466700887,0.45673551887624,0,2.22663208597237,0.520455980298408,1.82679286987285,1.15307748628029,0.753613202763113,1.76383060703557,1.0053327306374,0.988779870937496,0.289198713839823,0,1.29413479957927,0.441683036920787,0.969750506270444,0,5.5628351432194,5.02672096352292,0,0.838705871541442,1.19980546198682,0.762421362438388,5.54225365797844,3.20250421973039,0.376963056338593,8.16974304903699,12.2743419518559,4.57133698031032,5.353961681236,1.12023300235348,0,0.758168275301024,0.210441855886474,0.390361328888111,0.459804208866946,0.540186389416048,0.753524089178575,1.7009124787832,0.640568601424249,0.655912071918102,1.81092359517311,0.431135985865684,0.756424320671277,0.175951124163949,0.219195732427575,0.278047249225598,1.39300866608867,0.411564272815887,0,0.702213187313235,0.772043721344145,1.13665399758237,1.03562886267751,0.469052119962192,0.720248245844059,1.18372367792605,0.983821158737019,1.69693824176116,2.32533944750408,2.68273401399619,3.38619492864792,2.63295759861569,3.11918181750281,4.62092214411378,5.26319954731196,5.04965265169416,4.42881181909227,2.52347938276953,1.13195073617213,0,0.264450566663544,0.639864751605702,0,0.38660238396628,0.605050573870028,0.444756087689741,0.190225626112559,0,0.329397909448022,0,0.596869416123452,0.58489226135736,0,0.216138049874694,0,0.569003702859245,0.342745537829186,1.1270773567308,0.407302655690628,0.581857461502877,1.26244475802573,0.822074982615345,0.147610147979602,0.627994911365499,0.740382983530803,0,0.166845105716094,0,0,0.202860121388503,0,0,0,0.486405680325106,0,0,0,0.312037673114561,0.252578877947112,0,0,0.369506380333209,0.189491411770485,0.325929952884052,0.169745085775188,0,0,0.238043640886014,1.56106918286239,0,0,0.478364305972461,0.327726629431476,0.172684981865896,0.144649058581512,0,0,0,0,10.1146871692309,10.0802050469295,3.77050374366353,0.757412781613119,0.94652465824877,0.390438744296638,0.646270193198397,0.955875191810208,2.22798674082394,0,1.21443210502468,0.584511715822624,1.97643888973262,4.81981974632711,1.70328102249922,0.35613120733451,0.81443479676788,0.329940245945071,0,0,0.302323556964751,0,0.295301892880773,0.307435147943927,1.03371317267288,0.363533729477506,0.712994756769443,0.316036757935816,0,0,0,0.18006109403131,0.258717367565509,0.643011105094777,0.354680467284547,0.713475270408282,1.64549020602121,3.34911444026059,2.11204537257339,0.847328283455281,0.220528398054962,0.49465875882444,0.484393280087717,0.422190474497091,0.238744688006273,0.164140899745061,0,10.9400928186201,0.170870880797853,0.206386867963223,0.185194527369712,0.188368457004691,0.136694227721025,0,1.86976272993241,1.25956307091292,1.79659965945751,0,0.632671987162271,0.406638934253697,0.216010681643603,0.209088296014469,0,0.269728692769641,0.247960367176008,0.26175594198403,0,0,25.9298751794728,0.448549638131936,0.66183396182839,0.972255941720238,0.516639293910924,0.675824501963113,0.469428954583016,1.43224823328345,1.78260885523708,0.241584120826006,2.88030006257865,0,0,0,0.25984164595559,0.179026695667481,0.198681354781265,0,0,0.100966449948148,0.15241361331,0,0,0,0,0.906921534460845,0,0.448569283047378,0.335769232728157,0.772758376128762,1.87682475451182,0.36630324853453,0.428736758158132,0.501572104035363,11.2950368523413,7.82552902062201,8.59343270159095,9.6237782112465,7.53590771747707,12.8416962556249,7.42524750254986,4.5032120322422,7.70342095273148,8.80192529978094,0.62272408550506,0,0.853668028770671,0.486213434136588,0.838452650511929,1.10306105070008,0.666740183404846,1.03017528619447,0.962757628775446,0.758091635291392,1.2673964994512,1.13175804831646,0.655490552289177,0.960377286073039,1.09127391015665,0,0.927074607558844,0.77163688185482,0.824171801606613,1.03039244094078,0,0.532427418478012,0.953744759789284,0.145346416632329,0.0941093804153306,0.592302255241736,0.548783918618318,0.789209134313529,0.271608227691724,1.68342681497322,0.118635018124174,0.394017929502254,0.818462086339379,0.929621047115796,0.578719832943424,1.74867404556562,1.16965804222704,0.859484216193193,3.44318997723918,1.76473135295612,0.463735671240843
|short_description=p4@Cdk16
|short_description=p4@Cdk16
}}
}}

Latest revision as of 19:27, 1 October 2015

Short description:p4@Cdk16
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Cdk16_5end
Coexpression cluster:MCL_coexpression_mm9:60
Association with transcript: 65bp_to_NM_011049, uc009sto.1_5end
EntrezGene:Cdk16
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Cdk16

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.28
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I61.82
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.60
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.84
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.24
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.09
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A36.63
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.32
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.46
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.43
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.63
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.91
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B32.02
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B71.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.87
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B83.30
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.56
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.82
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.54
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C52.06
Mouse Granule cells, donor1.CNhs12131.11713-123C30.81
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.69
Mouse Meningeal cells, donor3.CNhs12109.11639-122D11.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C71.80
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D21.42
Mouse Microglia, donor1.CNhs12629.11718-123C81.50
Mouse Microglia, donor2.CNhs12634.11736-123E81.92
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.21
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.27
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F14.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.87
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.29
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F36.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D75.84
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.79
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.19
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E45.30
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.25
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.75
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.77
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.28
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.93
Mouse Schwann, donor1.CNhs12507.11728-123D93.10
Mouse Schwann, donor2.CNhs12573.11746-123F97.41
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C45.44
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.70
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.51
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.30
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.42
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G13.46
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G22.79
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G33.03
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.46
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D72.23
adrenal gland, embryo E14.CNhs11038.406-44C50.52
adrenal gland, embryo E16.CNhs11004.1254-43D61.83
adrenal gland, embryo E17.CNhs11043.1263-45I11.15
adrenal gland, embryo E18.CNhs11026.1262-18F50.75
adrenal gland, neonate N00.CNhs11191.1311-23C11.76
adrenal gland, neonate N25.CNhs11223.1377-27I31.01
amnion, adult pregnant day17.5.CNhs10488.583-22A80.99
aorta, adult.CNhs10498.46-23H10.29
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F51.29
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B25.56
cerebellum, neonate N30.CNhs11135.1395-42I25.03
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.84
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.76
corpora quadrigemina, adult.CNhs10501.16-22A45.54
corpus striatum, adult.CNhs10487.19-21D83.20
corpus striatum, neonate N00.CNhs11226.630-43F10.38
cortex, adult.CNhs10473.12-14D58.17
cortex, neonate N30.CNhs11107.1392-42F212.27
diencephalon, adult.CNhs10482.20-12F24.57
diencephalon, neonate N30.CNhs11201.1388-42B25.35
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.12
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.76
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.39
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C90.54
eyeball, embryo E17.CNhs11023.1261-18D40.75
eyeball, neonate N00.CNhs11207.633-15C61.70
eyeball, neonate N01.CNhs11140.1532-43E70.64
eyeball, neonate N02.CNhs11205.1551-44G80.66
eyeball, neonate N16.CNhs11188.777-19A21.81
forelimb, embryo E11.CNhs10596.335-25E20.43
forelimb, embryo E12.CNhs10600.359-14H20.76
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C41.39
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.77
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.14
heart, embryo E11.CNhs10586.331-24E91.04
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.72
heart, embryo E14.CNhs10597.403-26D41.18
heart, embryo E15.CNhs11017.431-16C80.98
heart, embryo E16.CNhs11021.457-17C61.70
heart, embryo E17.CNhs11025.479-18E52.33
heart, embryo E18.CNhs11030.1283-20G32.68
heart, neonate N00.CNhs11213.639-21E33.39
heart, neonate N03.CNhs11221.1349-25I22.63
heart, neonate N10.CNhs11118.749-24G13.12
heart, neonate N16.CNhs11209.782-15G14.62
heart, neonate N20.CNhs11127.821-26I65.26
heart, neonate N25.CNhs11196.1351-25D35.05
heart, neonate N30.CNhs11202.1390-42D24.43
hippocampus, adult.CNhs10478.13-16E82.52
hippocampus, neonate N00.CNhs11228.627-43G11.13
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.64
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.39
intestine, embryo E16.CNhs10585.463-22H40.61
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.60
intestine, neonate N10.CNhs11098.755-23A50.58
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.57
kidney, embryo E15.CNhs10997.434-16F80.34
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.58
kidney, neonate N00.CNhs11214.646-21G71.26
kidney, neonate N10.CNhs11206.758-6D50.82
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.63
kidney, neonate N30.CNhs11203.1385-42H10.74
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.49
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.37
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C61.56
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.48
lung, neonate N20.CNhs11109.822-18A40.33
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C210.11
medulla oblongata, neonate N30.CNhs11200.1396-42A310.08
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C73.77
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.76
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.95
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.65
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.96
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D82.23
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.21
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.98
olfactory brain, adult.CNhs10489.18-22I94.82
ovary, adult.CNhs10507.91-2I71.70
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.81
oviduct, adult pregnant day01.CNhs10500.988-6G60.33
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G91.03
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A50.64
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F60.71
pituitary gland, embryo E17.CNhs11039.1265-44F51.65
pituitary gland, neonate N00.CNhs11190.1308-22E93.35
placenta, adult pregnant day10.CNhs10472.539-13I72.11
placenta, adult pregnant day17.CNhs10464.577-18G30.85
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.49
skin, neonate N00.CNhs11124.650-25G40.48
skin, neonate N03.CNhs11215.662-22H30.42
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C910.94
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.87
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.26
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.80
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.63
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.25
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G525.93
testis, embryo E13.CNhs11031.389-23F50.45
testis, embryo E15.CNhs11034.443-27C50.66
testis, embryo E16.CNhs11033.470-26G50.97
testis, embryo E17.CNhs11029.486-18I50.52
testis, embryo E18.CNhs11027.503-18G50.68
testis, neonate N00.CNhs11189.1300-22B70.47
testis, neonate N07.CNhs11222.726-26I41.43
testis, neonate N10.CNhs11204.763-44D91.78
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E22.88
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.26
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.15
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.91
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.45
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.34
urinary bladder, adult.CNhs10481.879-12E40.77
uterus, adult pregnant day19.CNhs10497.590-15F51.88
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A111.30
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A27.83
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A38.59
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D79.62
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A47.54
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A512.84
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A67.43
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A74.50
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A87.70
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A98.80
whole body, embryo E11.CNhs11014.324-5I80.62
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.85
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.84
whole body, embryo E16.CNhs10514.453-14F21.10
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.13
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.66
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.09
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.93
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.09
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.55
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.27
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.93
whole body, embryo E17.5.CNhs10513.490-9F90.58
whole body, embryo E17.CNhs10517.475-3I51.75
whole body, embryo E18.CNhs10516.493-3B31.17
whole body, neonate N00.CNhs10525.657-19C20.86
whole body, neonate N01.CNhs10576.659-23C63.44
whole body, neonate N06.CNhs10515.692-21D11.76
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
structure with developmental contribution from neural crest3.15e-1892
nervous system1.39e-1775
central nervous system3.66e-1673
regional part of nervous system3.71e-1654
neural tube7.17e-1552
neural rod7.17e-1552
future spinal cord7.17e-1552
neural keel7.17e-1552
brain6.55e-1347
future brain6.55e-1347
regional part of brain3.24e-1246
ectoderm-derived structure7.14e-1295
ectoderm7.14e-1295
presumptive ectoderm7.14e-1295
neurectoderm2.39e-1164
neural plate2.39e-1164
presumptive neural plate2.39e-1164
occipital lobe3.79e-1110
visual cortex3.79e-1110
neocortex3.79e-1110
gray matter5.13e-1134
regional part of cerebral cortex1.27e-0917
anterior neural tube2.26e-0940
brain grey matter2.73e-0929
regional part of telencephalon2.73e-0929
telencephalon2.73e-0929
ecto-epithelium4.65e-0973
tube4.85e-09114
regional part of forebrain1.04e-0839
forebrain1.04e-0839
future forebrain1.04e-0839
cerebral cortex2.87e-0821
cerebral hemisphere2.87e-0821
pallium2.87e-0821
anatomical conduit6.73e-08122
pre-chordal neural plate1.57e-0749
posterior neural tube6.54e-0712
chordal neural plate6.54e-0712
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