FFCP PHASE1:Mm9::chr4:40669494..40669545,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=15502 | |EntrezGene=15502 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=60 | |MCL_coexpression_id=60 | ||
|TSSclassifier=NA | |||
|UniProt=P63037,Q5NTY0 | |UniProt=P63037,Q5NTY0 | ||
|association_with_transcript=0bp_to_ENSMUST00000030118,NM_008298,uc008sht.2_5end | |association_with_transcript=0bp_to_ENSMUST00000030118,NM_008298,uc008sht.2_5end | ||
|cluster_id=chr4:40669494..40669545,+ | |||
|description=CAGE_peak_1_at_Dnaja1_5end | |description=CAGE_peak_1_at_Dnaja1_5end | ||
|id=chr4:40669494..40669545,+ | |id=chr4:40669494..40669545,+ | ||
|ontology_enrichment_celltype=CL:0000540!1.79e-13!33;CL:0000047!1.79e-13!33;CL:0000031!1.79e-13!33;CL:0000404!1.79e-13!33;CL:0000117!1.48e-12!23;CL:0000337!1.48e-12!23;CL:0000393!1.48e-09!39;CL:0000211!1.48e-09!39;CL:0002319!4.04e-07!43;CL:0000221!4.46e-07!44;CL:0000133!4.46e-07!44 | |ontology_enrichment_celltype=CL:0000540!1.79e-13!33;CL:0000047!1.79e-13!33;CL:0000031!1.79e-13!33;CL:0000404!1.79e-13!33;CL:0000117!1.48e-12!23;CL:0000337!1.48e-12!23;CL:0000393!1.48e-09!39;CL:0000211!1.48e-09!39;CL:0002319!4.04e-07!43;CL:0000221!4.46e-07!44;CL:0000133!4.46e-07!44 | ||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.79e-13,33;CL:0000047,1.79e-13,33;CL:0000031,1.79e-13,33;CL:0000404,1.79e-13,33;CL:0000117,1.48e-12,23;CL:0000337,1.48e-12,23;CL:0000393,1.48e-09,39;CL:0000211,1.48e-09,39;CL:0002319,4.07e-07,43;CL:0000221,4.50e-07,44;CL:0000133,4.50e-07,44 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!6.30e-22!73;UBERON:0005743!6.30e-22!73;UBERON:0000073!2.13e-21!75;UBERON:0001016!2.13e-21!75;UBERON:0002346!9.76e-21!71;UBERON:0003075!9.76e-21!71;UBERON:0007284!9.76e-21!71;UBERON:0001049!2.10e-19!52;UBERON:0005068!2.10e-19!52;UBERON:0006241!2.10e-19!52;UBERON:0007135!2.10e-19!52;UBERON:0000033!2.94e-19!63;UBERON:0000955!2.30e-18!50;UBERON:0006238!2.30e-18!50;UBERON:0003056!3.57e-18!49;UBERON:0002616!8.15e-18!49;UBERON:0004121!3.21e-17!102;UBERON:0000924!3.21e-17!102;UBERON:0006601!3.21e-17!102;UBERON:0002020!2.56e-16!34;UBERON:0003080!3.20e-16!40;UBERON:0002780!1.01e-15!39;UBERON:0001890!1.01e-15!39;UBERON:0006240!1.01e-15!39;UBERON:0002791!1.21e-13!29;UBERON:0003528!1.21e-13!29;UBERON:0001893!1.21e-13!29;UBERON:0000153!6.80e-12!94;UBERON:0007811!1.26e-11!86;UBERON:0000956!1.62e-09!21;UBERON:0001869!1.62e-09!21;UBERON:0000203!1.62e-09!21;UBERON:0002021!8.10e-08!10;UBERON:0000411!8.10e-08!10;UBERON:0001950!8.10e-08!10;UBERON:0002619!1.28e-07!17;UBERON:0000468!1.67e-07!333 | |ontology_enrichment_uberon=UBERON:0001017!6.30e-22!73;UBERON:0005743!6.30e-22!73;UBERON:0000073!2.13e-21!75;UBERON:0001016!2.13e-21!75;UBERON:0002346!9.76e-21!71;UBERON:0003075!9.76e-21!71;UBERON:0007284!9.76e-21!71;UBERON:0001049!2.10e-19!52;UBERON:0005068!2.10e-19!52;UBERON:0006241!2.10e-19!52;UBERON:0007135!2.10e-19!52;UBERON:0000033!2.94e-19!63;UBERON:0000955!2.30e-18!50;UBERON:0006238!2.30e-18!50;UBERON:0003056!3.57e-18!49;UBERON:0002616!8.15e-18!49;UBERON:0004121!3.21e-17!102;UBERON:0000924!3.21e-17!102;UBERON:0006601!3.21e-17!102;UBERON:0002020!2.56e-16!34;UBERON:0003080!3.20e-16!40;UBERON:0002780!1.01e-15!39;UBERON:0001890!1.01e-15!39;UBERON:0006240!1.01e-15!39;UBERON:0002791!1.21e-13!29;UBERON:0003528!1.21e-13!29;UBERON:0001893!1.21e-13!29;UBERON:0000153!6.80e-12!94;UBERON:0007811!1.26e-11!86;UBERON:0000956!1.62e-09!21;UBERON:0001869!1.62e-09!21;UBERON:0000203!1.62e-09!21;UBERON:0002021!8.10e-08!10;UBERON:0000411!8.10e-08!10;UBERON:0001950!8.10e-08!10;UBERON:0002619!1.28e-07!17;UBERON:0000468!1.67e-07!333 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,4.02e-22,64;UBERON:0003075,4.02e-22,64;UBERON:0007284,4.02e-22,64;UBERON:0001017,6.37e-22,73;UBERON:0001016,2.15e-21,75;UBERON:0000073,1.30e-20,54;UBERON:0001049,2.10e-19,52;UBERON:0005068,2.10e-19,52;UBERON:0006241,2.10e-19,52;UBERON:0007135,2.10e-19,52;UBERON:0010314,1.96e-18,92;UBERON:0003056,3.57e-18,49;UBERON:0004121,8.80e-18,95;UBERON:0000924,8.80e-18,95;UBERON:0006601,8.80e-18,95;UBERON:0010371,3.39e-17,73;UBERON:0000955,1.14e-16,47;UBERON:0006238,1.14e-16,47;UBERON:0002020,2.56e-16,34;UBERON:0003080,3.20e-16,40;UBERON:0002616,3.91e-16,46;UBERON:0002780,1.01e-15,39;UBERON:0001890,1.01e-15,39;UBERON:0006240,1.01e-15,39;UBERON:0003528,1.21e-13,29;UBERON:0002791,1.21e-13,29;UBERON:0001893,1.21e-13,29;UBERON:0000956,1.62e-09,21;UBERON:0001869,1.62e-09,21;UBERON:0000203,1.62e-09,21;UBERON:0002021,8.10e-08,10;UBERON:0000411,8.10e-08,10;UBERON:0001950,8.10e-08,10;UBERON:0002619,1.28e-07,17;UBERON:0000922,1.91e-07,320 | |||
|phase1_expression=17.7765220286321,1.39590163055744,0.454999239389536,3.0246421130683,2.00358291978539,3.3575854382378,6.07392865548367,4.13194635013044,1.267098499365,1.40438715793196,3.93801326918661,6.06268408364557,5.47842335779858,4.02133851127388,15.6561588053361,18.0202987976945,35.6776557845355,4.25873923233621,4.52477630898938,6.36584477697045,61.5713420693745,10.1276770224903,16.194386926614,4.7997726838022,3.44113921600755,2.29692785646008,2.58457197695445,4.09395342103189,3.23039813075836,3.2763916868791,3.99114919179548,1.90509202037889,3.69038872550742,0,4.04392267651784,11.137721239019,6.53341940039581,3.76678467663217,9.37602413428561,4.71171369576418,1.76469446409304,4.09827290975067,2.91306211818692,6.29484089877886,7.50189291024408,5.32285581268876,4.69434806608824,2.39827672018491,1.97717564461025,5.24960727500565,2.79972843250725,17.2503077237966,2.51673909086605,5.80289713609076,7.39406358113421,6.43148590089868,5.73066879877513,6.18806510732931,32.7752666592548,29.6234948392338,43.1005354384202,2.37191172448392,3.55717918444456,1.3498495759221,0.988866362566974,0.7104801149461,0.898800331555214,3.45796474789399,34.4249512864146,30.7813539396255,34.703618622978,29.7077023779956,29.5963844875162,37.6046753589909,25.4948952908509,33.0918763179608,30.8324466798288,47.4996897676898,52.0726147738665,39.0383411681374,39.4311743926386,53.6540771673463,42.1566328492085,34.3285192119325,40.9499304041851,39.7748590389451,50.5419466836815,61.5118171223492,9.61722655331437,10.2777321745228,3.76823835312181,4.30211938490693,1.3599426674155,2.15881276655127,2.59910566979068,1.79210754838934,12.0782201313307,4.4311883870295,5.71529210126311,4.59341446863442,11.9716906810178,3.84979432242953,20.3844191765317,14.2213340630666,10.3915699685383,10.8944742154292,12.1325866803548,11.0758363327488,7.76813650941515,7.57054909230606,12.1439728736295,11.8741536541735,10.3776973765226,12.3592565253151,9.28950786372068,13.8233250462643,5.43828929015623,6.79616977523585,8.84610551949874,12.4560474459505,13.0296495891632,11.6370060752453,5.59175283654366,33.3770108593164,38.3287473468623,3.83185582812887,6.82946209683746,7.19883277192089,7.24300294316469,35.0510096207285,29.2800385803921,48.8795429719043,51.4519987769138,42.1930504595045,39.8953045554355,43.9673822913623,12.220723662038,6.34475550111474,6.57079171927554,7.57590681191306,25.1132454918018,24.8294272788151,23.7682011343061,22.4550178575215,18.5739642683125,23.4448108121275,23.0506242416933,15.0047955028629,16.5987354558289,22.6927296201383,20.2343792788541,14.4669183402199,11.3999372182495,9.05455632957633,8.64284972913362,18.9082553477569,6.31991868581911,7.46308930632674,5.11494298912067,18.2270679831242,18.2930326785255,22.5077576826269,17.0456209621351,16.1346670032871,20.6717931269087,19.3003174142839,15.0233104783787,12.1435956061856,11.3546296440302,9.19337798842933,8.35008738322314,6.72519942156529,7.90380415047782,6.57611451925822,55.3062564723655,48.5709770430223,4.95628174475697,7.40461586657924,21.3288250535234,21.5980104830208,10.4382643670896,8.0673409849337,8.00560957841533,6.27744566171445,7.59246498471219,6.58795818896044,7.03738584640755,5.76973768919337,3.11942539390592,5.39291645192533,6.05186539649144,5.97423819763102,8.91439134479484,14.8523066392647,14.6520056375005,13.2373363099454,9.50367187121366,10.5905088034381,8.85311519739602,6.19962621514329,6.12295038581362,5.30607804863742,2.07516838961004,16.3508203601772,15.1350426237166,11.9176919563972,13.7944882544182,10.3706178693539,9.67578236769395,8.0554918486227,5.5125977103512,6.31491250332587,7.18841032636773,5.20997326735905,3.12037673114561,3.03094653536534,2.51156378930677,2.8946611281802,5.91210208533135,18.759649765278,12.711268162478,13.7493519477902,13.1426539041561,7.03526281255626,6.18913466303636,8.58588050574315,9.77337893458384,6.2010113101657,10.5240147313941,6.55453258862952,8.80693407516067,5.35201516751593,4.52373851817817,11.4220193601929,2.45882136509518,7.45029215022778,34.6789274373631,42.5478422329697,3.11476396215683,5.04941854408746,18.9304931649754,13.6653560503823,19.6035291936847,13.1432838873904,12.0311284004493,18.6830510320629,21.8597778904443,16.9508397588561,22.9266911208984,39.5225219198823,7.94864477166304,16.2039699337202,12.3794089108718,7.58862565673663,13.2745138339963,13.595715624679,10.883648050731,5.84675747243284,3.83892460745005,6.7635732547664,3.6179961043551,5.08947221268508,7.84294232446387,7.26884543252377,4.21674434299995,6.18813259489121,21.1072555567349,24.3082476942269,15.9111181052788,20.1476812929697,17.3793428969428,22.652839835463,20.0749805134588,7.00269382963578,10.0908834467395,11.2270997557825,9.2621927183084,4.9465875882444,6.62004149453213,7.84068024066026,4.65552141612232,2.9545361954111,3.49777003955821,37.6413363081335,14.8657666294132,12.5895989457566,11.8524497516615,17.706634958441,19.2738861086645,11.4389086603261,3.90950388985867,5.318155188299,5.52799895217695,7.63736494412091,20.2455035891927,16.4688768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| |phase1_expression=17.7765220286321,1.39590163055744,0.454999239389536,3.0246421130683,2.00358291978539,3.3575854382378,6.07392865548367,4.13194635013044,1.267098499365,1.40438715793196,3.93801326918661,6.06268408364557,5.47842335779858,4.02133851127388,15.6561588053361,18.0202987976945,35.6776557845355,4.25873923233621,4.52477630898938,6.36584477697045,61.5713420693745,10.1276770224903,16.194386926614,4.7997726838022,3.44113921600755,2.29692785646008,2.58457197695445,4.09395342103189,3.23039813075836,3.2763916868791,3.99114919179548,1.90509202037889,3.69038872550742,0,4.04392267651784,11.137721239019,6.53341940039581,3.76678467663217,9.37602413428561,4.71171369576418,1.76469446409304,4.09827290975067,2.91306211818692,6.29484089877886,7.50189291024408,5.32285581268876,4.69434806608824,2.39827672018491,1.97717564461025,5.24960727500565,2.79972843250725,17.2503077237966,2.51673909086605,5.80289713609076,7.39406358113421,6.43148590089868,5.73066879877513,6.18806510732931,32.7752666592548,29.6234948392338,43.1005354384202,2.37191172448392,3.55717918444456,1.3498495759221,0.988866362566974,0.7104801149461,0.898800331555214,3.45796474789399,34.4249512864146,30.7813539396255,34.703618622978,29.7077023779956,29.5963844875162,37.6046753589909,25.4948952908509,33.0918763179608,30.8324466798288,47.4996897676898,52.0726147738665,39.0383411681374,39.4311743926386,53.6540771673463,42.1566328492085,34.3285192119325,40.9499304041851,39.7748590389451,50.5419466836815,61.5118171223492,9.61722655331437,10.2777321745228,3.76823835312181,4.30211938490693,1.3599426674155,2.15881276655127,2.59910566979068,1.79210754838934,12.0782201313307,4.4311883870295,5.71529210126311,4.59341446863442,11.9716906810178,3.84979432242953,20.3844191765317,14.2213340630666,10.3915699685383,10.8944742154292,12.1325866803548,11.0758363327488,7.76813650941515,7.57054909230606,12.1439728736295,11.8741536541735,10.3776973765226,12.3592565253151,9.28950786372068,13.8233250462643,5.43828929015623,6.79616977523585,8.84610551949874,12.4560474459505,13.0296495891632,11.6370060752453,5.59175283654366,33.3770108593164,38.3287473468623,3.83185582812887,6.82946209683746,7.19883277192089,7.24300294316469,35.0510096207285,29.2800385803921,48.8795429719043,51.4519987769138,42.1930504595045,39.8953045554355,43.9673822913623,12.220723662038,6.34475550111474,6.57079171927554,7.57590681191306,25.1132454918018,24.8294272788151,23.7682011343061,22.4550178575215,18.5739642683125,23.4448108121275,23.0506242416933,15.0047955028629,16.5987354558289,22.6927296201383,20.2343792788541,14.4669183402199,11.3999372182495,9.05455632957633,8.64284972913362,18.9082553477569,6.31991868581911,7.46308930632674,5.11494298912067,18.2270679831242,18.2930326785255,22.5077576826269,17.0456209621351,16.1346670032871,20.6717931269087,19.3003174142839,15.0233104783787,12.1435956061856,11.3546296440302,9.19337798842933,8.35008738322314,6.72519942156529,7.90380415047782,6.57611451925822,55.3062564723655,48.5709770430223,4.95628174475697,7.40461586657924,21.3288250535234,21.5980104830208,10.4382643670896,8.0673409849337,8.00560957841533,6.27744566171445,7.59246498471219,6.58795818896044,7.03738584640755,5.76973768919337,3.11942539390592,5.39291645192533,6.05186539649144,5.97423819763102,8.91439134479484,14.8523066392647,14.6520056375005,13.2373363099454,9.50367187121366,10.5905088034381,8.85311519739602,6.19962621514329,6.12295038581362,5.30607804863742,2.07516838961004,16.3508203601772,15.1350426237166,11.9176919563972,13.7944882544182,10.3706178693539,9.67578236769395,8.0554918486227,5.5125977103512,6.31491250332587,7.18841032636773,5.20997326735905,3.12037673114561,3.03094653536534,2.51156378930677,2.8946611281802,5.91210208533135,18.759649765278,12.711268162478,13.7493519477902,13.1426539041561,7.03526281255626,6.18913466303636,8.58588050574315,9.77337893458384,6.2010113101657,10.5240147313941,6.55453258862952,8.80693407516067,5.35201516751593,4.52373851817817,11.4220193601929,2.45882136509518,7.45029215022778,34.6789274373631,42.5478422329697,3.11476396215683,5.04941854408746,18.9304931649754,13.6653560503823,19.6035291936847,13.1432838873904,12.0311284004493,18.6830510320629,21.8597778904443,16.9508397588561,22.9266911208984,39.5225219198823,7.94864477166304,16.2039699337202,12.3794089108718,7.58862565673663,13.2745138339963,13.595715624679,10.883648050731,5.84675747243284,3.83892460745005,6.7635732547664,3.6179961043551,5.08947221268508,7.84294232446387,7.26884543252377,4.21674434299995,6.18813259489121,21.1072555567349,24.3082476942269,15.9111181052788,20.1476812929697,17.3793428969428,22.652839835463,20.0749805134588,7.00269382963578,10.0908834467395,11.2270997557825,9.2621927183084,4.9465875882444,6.62004149453213,7.84068024066026,4.65552141612232,2.9545361954111,3.49777003955821,37.6413363081335,14.8657666294132,12.5895989457566,11.8524497516615,17.706634958441,19.2738861086645,11.4389086603261,3.90950388985867,5.318155188299,5.52799895217695,7.63736494412091,20.2455035891927,16.4688768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| ||
|short_description=p1@Dnaja1 | |short_description=p1@Dnaja1 | ||
}} | }} |
Latest revision as of 22:59, 26 September 2015
Short description: | p1@Dnaja1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Dnaja1_5end |
Coexpression cluster: | MCL_coexpression_mm9:60 |
Association with transcript: | 0bp_to_ENSMUST00000030118, NM_008298, uc008sht.2_5end |
EntrezGene: | Dnaja1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 1.79e-13 | 33 |
neuronal stem cell | 1.79e-13 | 33 |
neuroblast | 1.79e-13 | 33 |
electrically signaling cell | 1.79e-13 | 33 |
CNS neuron (sensu Vertebrata) | 1.48e-12 | 23 |
neuroblast (sensu Vertebrata) | 1.48e-12 | 23 |
electrically responsive cell | 1.48e-09 | 39 |
electrically active cell | 1.48e-09 | 39 |
neural cell | 4.07e-07 | 43 |
ectodermal cell | 4.50e-07 | 44 |
neurectodermal cell | 4.50e-07 | 44 |
Ontology term | p-value | n |
---|---|---|
neurectoderm | 4.02e-22 | 64 |
neural plate | 4.02e-22 | 64 |
presumptive neural plate | 4.02e-22 | 64 |
central nervous system | 6.37e-22 | 73 |
nervous system | 2.15e-21 | 75 |
regional part of nervous system | 1.30e-20 | 54 |
neural tube | 2.10e-19 | 52 |
neural rod | 2.10e-19 | 52 |
future spinal cord | 2.10e-19 | 52 |
neural keel | 2.10e-19 | 52 |
structure with developmental contribution from neural crest | 1.96e-18 | 92 |
pre-chordal neural plate | 3.57e-18 | 49 |
ectoderm-derived structure | 8.80e-18 | 95 |
ectoderm | 8.80e-18 | 95 |
presumptive ectoderm | 8.80e-18 | 95 |
ecto-epithelium | 3.39e-17 | 73 |
brain | 1.14e-16 | 47 |
future brain | 1.14e-16 | 47 |
gray matter | 2.56e-16 | 34 |
anterior neural tube | 3.20e-16 | 40 |
regional part of brain | 3.91e-16 | 46 |
regional part of forebrain | 1.01e-15 | 39 |
forebrain | 1.01e-15 | 39 |
future forebrain | 1.01e-15 | 39 |
brain grey matter | 1.21e-13 | 29 |
regional part of telencephalon | 1.21e-13 | 29 |
telencephalon | 1.21e-13 | 29 |
cerebral cortex | 1.62e-09 | 21 |
cerebral hemisphere | 1.62e-09 | 21 |
pallium | 1.62e-09 | 21 |
occipital lobe | 8.10e-08 | 10 |
visual cortex | 8.10e-08 | 10 |
neocortex | 8.10e-08 | 10 |
regional part of cerebral cortex | 1.28e-07 | 17 |
embryo | 1.91e-07 | 320 |