FFCP PHASE1:Mm9::chr12:80273596..80273659,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=53612 | |EntrezGene=53612 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=60 | |MCL_coexpression_id=60 | ||
|TSSclassifier=NA | |||
|UniProt=Q91XH6 | |UniProt=Q91XH6 | ||
|association_with_transcript=0bp_to_ENSMUST00000055262_5end | |association_with_transcript=0bp_to_ENSMUST00000055262_5end | ||
|cluster_id=chr12:80273596..80273659,- | |||
|description=CAGE_peak_2_at_Vti1b_5end | |description=CAGE_peak_2_at_Vti1b_5end | ||
|id=chr12:80273596..80273659,- | |id=chr12:80273596..80273659,- | ||
|ontology_enrichment_celltype=CL:0000117!1.39e-10!23;CL:0000337!1.39e-10!23;CL:0000540!1.37e-07!33;CL:0000047!1.37e-07!33;CL:0000031!1.37e-07!33;CL:0000404!1.37e-07!33 | |ontology_enrichment_celltype=CL:0000117!1.39e-10!23;CL:0000337!1.39e-10!23;CL:0000540!1.37e-07!33;CL:0000047!1.37e-07!33;CL:0000031!1.37e-07!33;CL:0000404!1.37e-07!33 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.22e-10,23;CL:0000337,1.22e-10,23;CL:0000540,1.20e-07,33;CL:0000047,1.20e-07,33;CL:0000031,1.20e-07,33;CL:0000404,1.20e-07,33;CL:0000221,8.51e-07,44;CL:0000133,8.51e-07,44 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!5.24e-19!52;UBERON:0005068!5.24e-19!52;UBERON:0006241!5.24e-19!52;UBERON:0007135!5.24e-19!52;UBERON:0001017!6.49e-19!73;UBERON:0005743!6.49e-19!73;UBERON:0000033!2.37e-18!63;UBERON:0000955!5.30e-18!50;UBERON:0006238!5.30e-18!50;UBERON:0000073!5.76e-18!75;UBERON:0001016!5.76e-18!75;UBERON:0002346!1.33e-17!71;UBERON:0003075!1.33e-17!71;UBERON:0007284!1.33e-17!71;UBERON:0002616!1.97e-17!49;UBERON:0004121!2.58e-17!102;UBERON:0000924!2.58e-17!102;UBERON:0006601!2.58e-17!102;UBERON:0002020!3.16e-15!34;UBERON:0003056!4.54e-14!49;UBERON:0003080!3.44e-13!40;UBERON:0002791!1.14e-12!29;UBERON:0003528!1.14e-12!29;UBERON:0001893!1.14e-12!29;UBERON:0002780!1.32e-12!39;UBERON:0001890!1.32e-12!39;UBERON:0006240!1.32e-12!39;UBERON:0000956!1.69e-08!21;UBERON:0001869!1.69e-08!21;UBERON:0000203!1.69e-08!21;UBERON:0007811!1.35e-07!86;UBERON:0002619!1.56e-07!17;UBERON:0002021!3.54e-07!10;UBERON:0000411!3.54e-07!10;UBERON:0001950!3.54e-07!10;UBERON:0000153!5.63e-07!94;UBERON:0003076!9.64e-07!12;UBERON:0003057!9.64e-07!12 | |ontology_enrichment_uberon=UBERON:0001049!5.24e-19!52;UBERON:0005068!5.24e-19!52;UBERON:0006241!5.24e-19!52;UBERON:0007135!5.24e-19!52;UBERON:0001017!6.49e-19!73;UBERON:0005743!6.49e-19!73;UBERON:0000033!2.37e-18!63;UBERON:0000955!5.30e-18!50;UBERON:0006238!5.30e-18!50;UBERON:0000073!5.76e-18!75;UBERON:0001016!5.76e-18!75;UBERON:0002346!1.33e-17!71;UBERON:0003075!1.33e-17!71;UBERON:0007284!1.33e-17!71;UBERON:0002616!1.97e-17!49;UBERON:0004121!2.58e-17!102;UBERON:0000924!2.58e-17!102;UBERON:0006601!2.58e-17!102;UBERON:0002020!3.16e-15!34;UBERON:0003056!4.54e-14!49;UBERON:0003080!3.44e-13!40;UBERON:0002791!1.14e-12!29;UBERON:0003528!1.14e-12!29;UBERON:0001893!1.14e-12!29;UBERON:0002780!1.32e-12!39;UBERON:0001890!1.32e-12!39;UBERON:0006240!1.32e-12!39;UBERON:0000956!1.69e-08!21;UBERON:0001869!1.69e-08!21;UBERON:0000203!1.69e-08!21;UBERON:0007811!1.35e-07!86;UBERON:0002619!1.56e-07!17;UBERON:0002021!3.54e-07!10;UBERON:0000411!3.54e-07!10;UBERON:0001950!3.54e-07!10;UBERON:0000153!5.63e-07!94;UBERON:0003076!9.64e-07!12;UBERON:0003057!9.64e-07!12 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.99e-20,54;UBERON:0002346,1.47e-19,64;UBERON:0003075,1.47e-19,64;UBERON:0007284,1.47e-19,64;UBERON:0001017,3.94e-19,73;UBERON:0001049,4.04e-19,52;UBERON:0005068,4.04e-19,52;UBERON:0006241,4.04e-19,52;UBERON:0007135,4.04e-19,52;UBERON:0010371,4.75e-19,73;UBERON:0004121,1.12e-18,95;UBERON:0000924,1.12e-18,95;UBERON:0006601,1.12e-18,95;UBERON:0001016,3.58e-18,75;UBERON:0000955,2.55e-16,47;UBERON:0006238,2.55e-16,47;UBERON:0002616,9.28e-16,46;UBERON:0002020,2.58e-15,34;UBERON:0003056,3.77e-14,49;UBERON:0010314,4.70e-14,92;UBERON:0003080,2.89e-13,40;UBERON:0003528,9.69e-13,29;UBERON:0002791,9.69e-13,29;UBERON:0001893,9.69e-13,29;UBERON:0002780,1.12e-12,39;UBERON:0001890,1.12e-12,39;UBERON:0006240,1.12e-12,39;UBERON:0000956,1.53e-08,21;UBERON:0001869,1.53e-08,21;UBERON:0000203,1.53e-08,21;UBERON:0002619,1.42e-07,17;UBERON:0002021,3.25e-07,10;UBERON:0000411,3.25e-07,10;UBERON:0001950,3.25e-07,10;UBERON:0003076,8.91e-07,12;UBERON:0003057,8.91e-07,12 | |||
|phase1_expression=2.24208385946712,5.23463111459042,5.0049916332849,3.0246421130683,3.00537437967808,2.85394762250213,2.33612640595526,1.03298658753261,2.67498572088167,1.87251621057595,0.856089841127525,0.558405112967355,0.342401459862411,0.786783621770977,0.666219523631325,1.01237633694913,0.699561878128147,0.473193248037357,0.274228867211478,0,5.01755411891312,1.68794617041505,0.783599367416806,1.43993180514066,1.60586496747019,2.8711598205751,4.73838195774982,2.58565479223067,1.71021077510736,1.76421090831952,1.99557459589774,0,1.23012957516914,0,3.75507105676657,4.3221007793208,2.45003227514843,0.418531630736908,1.5626706890476,1.0470474879476,0,0,0.971020706062307,1.38486499773135,1.52065396829272,1.10128051297009,5.47673941043627,1.96222640742402,2.41654801007919,3.11087838518853,2.79972843250725,4.31257693094915,0.503347818173209,0,0.672187598284928,1.54355661621568,2.29226751951005,3.09403255366465,5.26022798234954,10.0508286061686,5.07065122804943,3.38844532069132,1.77858959222228,1.3498495759221,0,0,0.599200221036809,0.384218305321555,3.00699875694585,3.51015439662396,2.52389953621658,5.42736870367227,6.40518768759679,1.71487118900936,2.87536413054709,2.75765635983006,5.50579404996943,6.89511625660014,7.52672012955593,6.4624280987795,6.03818447775904,4.68822033501084,9.21303896704557,7.87867654044352,9.62628960993904,3.83017161115768,5.26775218956681,6.52398060388552,1.28734528666413,1.5870027622425,3.76823835312181,1.72084775396277,2.03991400112325,2.15881276655127,0.649776417447669,0.448026887097336,1.96622188184453,2.04516387093669,4.93593408745451,3.5333957451034,2.39433813620357,2.56652954828636,0,0,2.16491041011214,1.77351905832569,2.02209778005913,2.39786147410026,0.258937883647172,0.742210695324124,2.60227990149204,1.82679286987285,2.30615497256059,2.11011696773672,1.88141931417128,1.25666591329675,1.48316980640624,1.44599356919912,0,1.29413479957927,1.32504911076236,0.969750506270444,1.86391761218122,4.68449275218475,4.60782754989601,1.02182822083437,4.19352935770721,2.39961092397363,3.68503658511888,7.48953197024113,6.40500843946077,3.26701315493447,5.04090528557602,11.2514801225345,5.61027720310812,6.65189178577806,2.44414473240759,0.622034853050465,1.51633655060205,3.36706969418358,3.25301107406759,3.90833577536904,3.42118046630164,3.46621081022145,2.78949646520444,1.92170580427275,2.34254311399322,1.29351685369508,3.44908788692548,1.70195472151037,2.46331573829528,1.97276159184817,1.11218899690239,2.089512999133,1.85203922767149,1.79130840136644,4.21327912387941,3.08817488537658,3.12579849335152,2.48550927042602,3.51789089971644,2.34080679899319,2.13070262026689,1.18058539048442,2.46827380619805,2.09280550275367,0.536546802799238,1.63471479314037,1.31647879930784,1.64167464079095,0.729619285912702,1.02339991197733,1.53685080703735,1.20785776884335,3.99550902271842,3.60166143327496,1.98251269790279,3.70230793328962,1.2797295032114,2.32236671860439,2.06187938115349,1.61346819698674,1.77902435075896,0.760902504450237,1.89811624617805,1.15289268306808,1.75934646160189,0.795825888164603,0.779856348476481,1.79763881730844,1.94524244887225,1.7922714592893,3.03468641524931,2.62771579002376,2.25415471346161,3.25842124552503,1.55161989734101,1.68325967736765,1.45444035385792,1.03327103585722,1.255989822731,1.48076596706161,2.96452627087149,0.83422552858047,0.786235980452812,0.224862112384854,1.01430060694251,0.72353147925725,1.2731292589071,1.43848068725405,1.13494658742525,0.823684239564244,1.43768206527355,0.744281895337007,1.24815069245824,0.757736633841335,1.79397413521912,2.41221760681684,0.184753190166605,2.27389694124582,1.46668478797823,2.37643120085263,2.11221223459652,1.50755631697634,1.42826184531608,1.75620283072019,1.10344600874334,0.664394068946325,1.11618338060241,0,0.690739927463582,0.578596234326046,0,0.54390568381871,2.95058563811422,1.10374698521893,10.1146871692309,9.14251155419185,4.26230857979356,3.02965112645248,1.57754109708128,2.73307121007647,1.93881057959519,2.15071918157297,2.89638276307112,1.41538265394416,1.21443210502468,0.584511715822624,1.97643888973262,6.10510501201433,0.851640511249612,2.31485284767432,2.60619134965722,1.81467135269789,6.63725691699814,1.69946445308487,1.51161778482376,1.88605079755898,2.36241514304618,1.53717573971964,1.29214146584111,3.99887102425256,0.712994756769443,0.316036757935816,4.21674434299995,4.12542172992747,1.70219802876894,3.6012218806262,1.81102157295856,2.35770738534752,1.59606210278046,2.49716344642899,3.78462747384878,1.522324745573,0.938686832254841,1.27099242518292,2.8668691747145,4.78170133530292,2.26050197374268,1.80938774784468,2.14870219205646,1.80554989719567,2.33184669303881,11.1255181206306,1.02522528478712,1.857481811669,1.29636169158798,0.753473828018764,1.36694227721025,2.0590035588587,3.56954702987096,3.49878630809145,3.59319931891502,0.954670618015114,1.89801596148681,2.03319467126849,2.16010681643603,2.50905955217362,2.18362563746178,1.61837215661785,1.65306911450672,1.57053565190418,0.777689839750757,1.2426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|phase1_expression=2.24208385946712,5.23463111459042,5.0049916332849,3.0246421130683,3.00537437967808,2.85394762250213,2.33612640595526,1.03298658753261,2.67498572088167,1.87251621057595,0.856089841127525,0.558405112967355,0.342401459862411,0.786783621770977,0.666219523631325,1.01237633694913,0.699561878128147,0.473193248037357,0.274228867211478,0,5.01755411891312,1.68794617041505,0.783599367416806,1.43993180514066,1.60586496747019,2.8711598205751,4.73838195774982,2.58565479223067,1.71021077510736,1.76421090831952,1.99557459589774,0,1.23012957516914,0,3.75507105676657,4.3221007793208,2.45003227514843,0.418531630736908,1.5626706890476,1.0470474879476,0,0,0.971020706062307,1.38486499773135,1.52065396829272,1.10128051297009,5.47673941043627,1.96222640742402,2.41654801007919,3.11087838518853,2.79972843250725,4.31257693094915,0.503347818173209,0,0.672187598284928,1.54355661621568,2.29226751951005,3.09403255366465,5.26022798234954,10.0508286061686,5.07065122804943,3.38844532069132,1.77858959222228,1.3498495759221,0,0,0.599200221036809,0.384218305321555,3.00699875694585,3.51015439662396,2.52389953621658,5.42736870367227,6.40518768759679,1.71487118900936,2.87536413054709,2.75765635983006,5.50579404996943,6.89511625660014,7.52672012955593,6.4624280987795,6.03818447775904,4.68822033501084,9.21303896704557,7.87867654044352,9.62628960993904,3.83017161115768,5.26775218956681,6.52398060388552,1.28734528666413,1.5870027622425,3.76823835312181,1.72084775396277,2.03991400112325,2.15881276655127,0.649776417447669,0.448026887097336,1.96622188184453,2.04516387093669,4.93593408745451,3.5333957451034,2.39433813620357,2.56652954828636,0,0,2.16491041011214,1.77351905832569,2.02209778005913,2.39786147410026,0.258937883647172,0.742210695324124,2.60227990149204,1.82679286987285,2.30615497256059,2.11011696773672,1.88141931417128,1.25666591329675,1.48316980640624,1.44599356919912,0,1.29413479957927,1.32504911076236,0.969750506270444,1.86391761218122,4.68449275218475,4.60782754989601,1.02182822083437,4.19352935770721,2.39961092397363,3.68503658511888,7.48953197024113,6.40500843946077,3.26701315493447,5.04090528557602,11.2514801225345,5.61027720310812,6.65189178577806,2.44414473240759,0.622034853050465,1.51633655060205,3.36706969418358,3.25301107406759,3.90833577536904,3.42118046630164,3.46621081022145,2.78949646520444,1.92170580427275,2.34254311399322,1.29351685369508,3.44908788692548,1.70195472151037,2.46331573829528,1.97276159184817,1.11218899690239,2.089512999133,1.85203922767149,1.79130840136644,4.21327912387941,3.08817488537658,3.12579849335152,2.48550927042602,3.51789089971644,2.34080679899319,2.13070262026689,1.18058539048442,2.46827380619805,2.09280550275367,0.536546802799238,1.63471479314037,1.31647879930784,1.64167464079095,0.729619285912702,1.02339991197733,1.53685080703735,1.20785776884335,3.99550902271842,3.60166143327496,1.98251269790279,3.70230793328962,1.2797295032114,2.32236671860439,2.06187938115349,1.61346819698674,1.77902435075896,0.760902504450237,1.89811624617805,1.15289268306808,1.75934646160189,0.795825888164603,0.779856348476481,1.79763881730844,1.94524244887225,1.7922714592893,3.03468641524931,2.62771579002376,2.25415471346161,3.25842124552503,1.55161989734101,1.68325967736765,1.45444035385792,1.03327103585722,1.255989822731,1.48076596706161,2.96452627087149,0.83422552858047,0.786235980452812,0.224862112384854,1.01430060694251,0.72353147925725,1.2731292589071,1.43848068725405,1.13494658742525,0.823684239564244,1.43768206527355,0.744281895337007,1.24815069245824,0.757736633841335,1.79397413521912,2.41221760681684,0.184753190166605,2.27389694124582,1.46668478797823,2.37643120085263,2.11221223459652,1.50755631697634,1.42826184531608,1.75620283072019,1.10344600874334,0.664394068946325,1.11618338060241,0,0.690739927463582,0.578596234326046,0,0.54390568381871,2.95058563811422,1.10374698521893,10.1146871692309,9.14251155419185,4.26230857979356,3.02965112645248,1.57754109708128,2.73307121007647,1.93881057959519,2.15071918157297,2.89638276307112,1.41538265394416,1.21443210502468,0.584511715822624,1.97643888973262,6.10510501201433,0.851640511249612,2.31485284767432,2.60619134965722,1.81467135269789,6.63725691699814,1.69946445308487,1.51161778482376,1.88605079755898,2.36241514304618,1.53717573971964,1.29214146584111,3.99887102425256,0.712994756769443,0.316036757935816,4.21674434299995,4.12542172992747,1.70219802876894,3.6012218806262,1.81102157295856,2.35770738534752,1.59606210278046,2.49716344642899,3.78462747384878,1.522324745573,0.938686832254841,1.27099242518292,2.8668691747145,4.78170133530292,2.26050197374268,1.80938774784468,2.14870219205646,1.80554989719567,2.33184669303881,11.1255181206306,1.02522528478712,1.857481811669,1.29636169158798,0.753473828018764,1.36694227721025,2.0590035588587,3.56954702987096,3.49878630809145,3.59319931891502,0.954670618015114,1.89801596148681,2.03319467126849,2.16010681643603,2.50905955217362,2.18362563746178,1.61837215661785,1.65306911450672,1.57053565190418,0.777689839750757,1.2426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| ||
|short_description=p2@Vti1b | |short_description=p2@Vti1b | ||
}} | }} |
Latest revision as of 20:38, 26 September 2015
Short description: | p2@Vti1b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Vti1b_5end |
Coexpression cluster: | MCL_coexpression_mm9:60 |
Association with transcript: | 0bp_to_ENSMUST00000055262_5end |
EntrezGene: | Vti1b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.22e-10 | 23 |
neuroblast (sensu Vertebrata) | 1.22e-10 | 23 |
neuron | 1.20e-07 | 33 |
neuronal stem cell | 1.20e-07 | 33 |
neuroblast | 1.20e-07 | 33 |
electrically signaling cell | 1.20e-07 | 33 |
ectodermal cell | 8.51e-07 | 44 |
neurectodermal cell | 8.51e-07 | 44 |