FFCP PHASE1:Mm9::chr4:150503457..150503498,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=100072 | |EntrezGene=100072 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1720 | |MCL_coexpression_id=1720 | ||
|TSSclassifier=NA | |||
|UniProt=A2A891 | |UniProt=A2A891 | ||
|association_with_transcript=105bp_to_ENSMUST00000105668,uc008vym.2_5end | |association_with_transcript=105bp_to_ENSMUST00000105668,uc008vym.2_5end | ||
|cluster_id=chr4:150503457..150503498,- | |||
|description=CAGE_peak_3_at_Camta1_5end | |description=CAGE_peak_3_at_Camta1_5end | ||
|id=chr4:150503457..150503498,- | |id=chr4:150503457..150503498,- | ||
|ontology_enrichment_celltype=CL:0000540!3.26e-18!33;CL:0000047!3.26e-18!33;CL:0000031!3.26e-18!33;CL:0000404!3.26e-18!33;CL:0000393!9.72e-13!39;CL:0000211!9.72e-13!39;CL:0000117!1.08e-12!23;CL:0000337!1.08e-12!23;CL:0000221!1.17e-12!44;CL:0000133!1.17e-12!44;CL:0002319!1.19e-12!43;CL:0000055!1.34e-08!50 | |ontology_enrichment_celltype=CL:0000540!3.26e-18!33;CL:0000047!3.26e-18!33;CL:0000031!3.26e-18!33;CL:0000404!3.26e-18!33;CL:0000393!9.72e-13!39;CL:0000211!9.72e-13!39;CL:0000117!1.08e-12!23;CL:0000337!1.08e-12!23;CL:0000221!1.17e-12!44;CL:0000133!1.17e-12!44;CL:0002319!1.19e-12!43;CL:0000055!1.34e-08!50 | ||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.07e-20,33;CL:0000047,1.07e-20,33;CL:0000031,1.07e-20,33;CL:0000404,1.07e-20,33;CL:0000393,1.67e-15,39;CL:0000211,1.67e-15,39;CL:0002319,1.95e-14,43;CL:0000117,6.29e-14,23;CL:0000337,6.29e-14,23;CL:0000221,8.13e-14,44;CL:0000133,8.13e-14,44;CL:0000107,1.31e-07,9 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!2.53e-21!102;UBERON:0000924!2.53e-21!102;UBERON:0006601!2.53e-21!102;UBERON:0001017!1.75e-19!73;UBERON:0005743!1.75e-19!73;UBERON:0002346!1.73e-18!71;UBERON:0003075!1.73e-18!71;UBERON:0007284!1.73e-18!71;UBERON:0000073!3.47e-18!75;UBERON:0001016!3.47e-18!75;UBERON:0003056!1.05e-14!49;UBERON:0000033!8.07e-14!63;UBERON:0001049!1.69e-11!52;UBERON:0005068!1.69e-11!52;UBERON:0006241!1.69e-11!52;UBERON:0007135!1.69e-11!52;UBERON:0000955!3.48e-10!50;UBERON:0006238!3.48e-10!50;UBERON:0003080!4.57e-10!40;UBERON:0002780!7.71e-10!39;UBERON:0001890!7.71e-10!39;UBERON:0006240!7.71e-10!39;UBERON:0002616!1.06e-09!49;UBERON:0002020!2.19e-09!34;UBERON:0000153!1.61e-07!94;UBERON:0002791!5.06e-07!29;UBERON:0003528!5.06e-07!29;UBERON:0001893!5.06e-07!29;UBERON:0000468!5.08e-07!333 | |ontology_enrichment_uberon=UBERON:0004121!2.53e-21!102;UBERON:0000924!2.53e-21!102;UBERON:0006601!2.53e-21!102;UBERON:0001017!1.75e-19!73;UBERON:0005743!1.75e-19!73;UBERON:0002346!1.73e-18!71;UBERON:0003075!1.73e-18!71;UBERON:0007284!1.73e-18!71;UBERON:0000073!3.47e-18!75;UBERON:0001016!3.47e-18!75;UBERON:0003056!1.05e-14!49;UBERON:0000033!8.07e-14!63;UBERON:0001049!1.69e-11!52;UBERON:0005068!1.69e-11!52;UBERON:0006241!1.69e-11!52;UBERON:0007135!1.69e-11!52;UBERON:0000955!3.48e-10!50;UBERON:0006238!3.48e-10!50;UBERON:0003080!4.57e-10!40;UBERON:0002780!7.71e-10!39;UBERON:0001890!7.71e-10!39;UBERON:0006240!7.71e-10!39;UBERON:0002616!1.06e-09!49;UBERON:0002020!2.19e-09!34;UBERON:0000153!1.61e-07!94;UBERON:0002791!5.06e-07!29;UBERON:0003528!5.06e-07!29;UBERON:0001893!5.06e-07!29;UBERON:0000468!5.08e-07!333 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,2.31e-19,95;UBERON:0000924,2.31e-19,95;UBERON:0006601,2.31e-19,95;UBERON:0001017,6.35e-19,73;UBERON:0001016,6.83e-18,75;UBERON:0002346,3.91e-17,64;UBERON:0003075,3.91e-17,64;UBERON:0007284,3.91e-17,64;UBERON:0010371,5.82e-15,73;UBERON:0003056,1.20e-14,49;UBERON:0010314,8.13e-12,92;UBERON:0000073,3.26e-11,54;UBERON:0001049,1.61e-10,52;UBERON:0005068,1.61e-10,52;UBERON:0006241,1.61e-10,52;UBERON:0007135,1.61e-10,52;UBERON:0003080,8.88e-10,40;UBERON:0002780,1.66e-09,39;UBERON:0001890,1.66e-09,39;UBERON:0006240,1.66e-09,39;UBERON:0002020,3.09e-09,34;UBERON:0000955,7.51e-09,47;UBERON:0006238,7.51e-09,47;UBERON:0002616,2.54e-08,46;UBERON:0002410,1.31e-07,9 | |||
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| ||
|short_description=p3@Camta1 | |short_description=p3@Camta1 | ||
}} | }} |
Latest revision as of 18:36, 26 September 2015
Short description: | p3@Camta1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Camta1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1720 |
Association with transcript: | 105bp_to_ENSMUST00000105668, uc008vym.2_5end |
EntrezGene: | Camta1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 1.07e-20 | 33 |
neuronal stem cell | 1.07e-20 | 33 |
neuroblast | 1.07e-20 | 33 |
electrically signaling cell | 1.07e-20 | 33 |
electrically responsive cell | 1.67e-15 | 39 |
electrically active cell | 1.67e-15 | 39 |
neural cell | 1.95e-14 | 43 |
CNS neuron (sensu Vertebrata) | 6.29e-14 | 23 |
neuroblast (sensu Vertebrata) | 6.29e-14 | 23 |
ectodermal cell | 8.13e-14 | 44 |
neurectodermal cell | 8.13e-14 | 44 |
autonomic neuron | 1.31e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 2.31e-19 | 95 |
ectoderm | 2.31e-19 | 95 |
presumptive ectoderm | 2.31e-19 | 95 |
central nervous system | 6.35e-19 | 73 |
nervous system | 6.83e-18 | 75 |
neurectoderm | 3.91e-17 | 64 |
neural plate | 3.91e-17 | 64 |
presumptive neural plate | 3.91e-17 | 64 |
ecto-epithelium | 5.82e-15 | 73 |
pre-chordal neural plate | 1.20e-14 | 49 |
structure with developmental contribution from neural crest | 8.13e-12 | 92 |
regional part of nervous system | 3.26e-11 | 54 |
neural tube | 1.61e-10 | 52 |
neural rod | 1.61e-10 | 52 |
future spinal cord | 1.61e-10 | 52 |
neural keel | 1.61e-10 | 52 |
anterior neural tube | 8.88e-10 | 40 |
regional part of forebrain | 1.66e-09 | 39 |
forebrain | 1.66e-09 | 39 |
future forebrain | 1.66e-09 | 39 |
gray matter | 3.09e-09 | 34 |
brain | 7.51e-09 | 47 |
future brain | 7.51e-09 | 47 |
regional part of brain | 2.54e-08 | 46 |
autonomic nervous system | 1.31e-07 | 9 |