FFCP PHASE1:Mm9::chr9:22215959..22216020,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=68283 | |EntrezGene=68283 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=788 | |MCL_coexpression_id=788 | ||
|TSSclassifier=NA | |||
|UniProt=Q7TQE7,Q8BT40 | |UniProt=Q7TQE7,Q8BT40 | ||
|association_with_transcript=0bp_to_ENSMUST00000058868,NM_026739,uc009ool.1,uc009oom.1,uc009oon.1_5end | |association_with_transcript=0bp_to_ENSMUST00000058868,NM_026739,uc009ool.1,uc009oom.1,uc009oon.1_5end | ||
|cluster_id=chr9:22215959..22216020,+ | |||
|description=CAGE_peak_1_at_9530077C05Rik_5end | |description=CAGE_peak_1_at_9530077C05Rik_5end | ||
|id=chr9:22215959..22216020,+ | |id=chr9:22215959..22216020,+ | ||
|ontology_enrichment_celltype=CL:0000117!9.54e-09!23;CL:0000337!9.54e-09!23;CL:0000221!3.26e-08!44;CL:0000133!3.26e-08!44;CL:0002319!3.80e-08!43;CL:0000540!2.50e-07!33;CL:0000047!2.50e-07!33;CL:0000031!2.50e-07!33;CL:0000404!2.50e-07!33 | |ontology_enrichment_celltype=CL:0000117!9.54e-09!23;CL:0000337!9.54e-09!23;CL:0000221!3.26e-08!44;CL:0000133!3.26e-08!44;CL:0002319!3.80e-08!43;CL:0000540!2.50e-07!33;CL:0000047!2.50e-07!33;CL:0000031!2.50e-07!33;CL:0000404!2.50e-07!33 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,6.05e-09,23;CL:0000337,6.05e-09,23;CL:0000221,3.48e-08,44;CL:0000133,3.48e-08,44;CL:0002319,4.08e-08,43;CL:0000540,2.72e-07,33;CL:0000047,2.72e-07,33;CL:0000031,2.72e-07,33;CL:0000404,2.72e-07,33 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!1.19e-26!71;UBERON:0003075!1.19e-26!71;UBERON:0007284!1.19e-26!71;UBERON:0001017!1.29e-24!73;UBERON:0005743!1.29e-24!73;UBERON:0000073!1.32e-23!75;UBERON:0001016!1.32e-23!75;UBERON:0001049!3.00e-22!52;UBERON:0005068!3.00e-22!52;UBERON:0006241!3.00e-22!52;UBERON:0007135!3.00e-22!52;UBERON:0000033!3.65e-22!63;UBERON:0000955!3.90e-21!50;UBERON:0006238!3.90e-21!50;UBERON:0004121!9.61e-21!102;UBERON:0000924!9.61e-21!102;UBERON:0006601!9.61e-21!102;UBERON:0002616!1.86e-20!49;UBERON:0003056!4.11e-20!49;UBERON:0007811!6.41e-18!86;UBERON:0003080!3.04e-17!40;UBERON:0000153!3.60e-17!94;UBERON:0002780!1.21e-16!39;UBERON:0001890!1.21e-16!39;UBERON:0006240!1.21e-16!39;UBERON:0002020!3.04e-15!34;UBERON:0002791!2.65e-13!29;UBERON:0003528!2.65e-13!29;UBERON:0001893!2.65e-13!29;UBERON:0000956!2.49e-09!21;UBERON:0001869!2.49e-09!21;UBERON:0000203!2.49e-09!21;UBERON:0002619!7.07e-09!17;UBERON:0000475!1.09e-07!200 | |ontology_enrichment_uberon=UBERON:0002346!1.19e-26!71;UBERON:0003075!1.19e-26!71;UBERON:0007284!1.19e-26!71;UBERON:0001017!1.29e-24!73;UBERON:0005743!1.29e-24!73;UBERON:0000073!1.32e-23!75;UBERON:0001016!1.32e-23!75;UBERON:0001049!3.00e-22!52;UBERON:0005068!3.00e-22!52;UBERON:0006241!3.00e-22!52;UBERON:0007135!3.00e-22!52;UBERON:0000033!3.65e-22!63;UBERON:0000955!3.90e-21!50;UBERON:0006238!3.90e-21!50;UBERON:0004121!9.61e-21!102;UBERON:0000924!9.61e-21!102;UBERON:0006601!9.61e-21!102;UBERON:0002616!1.86e-20!49;UBERON:0003056!4.11e-20!49;UBERON:0007811!6.41e-18!86;UBERON:0003080!3.04e-17!40;UBERON:0000153!3.60e-17!94;UBERON:0002780!1.21e-16!39;UBERON:0001890!1.21e-16!39;UBERON:0006240!1.21e-16!39;UBERON:0002020!3.04e-15!34;UBERON:0002791!2.65e-13!29;UBERON:0003528!2.65e-13!29;UBERON:0001893!2.65e-13!29;UBERON:0000956!2.49e-09!21;UBERON:0001869!2.49e-09!21;UBERON:0000203!2.49e-09!21;UBERON:0002619!7.07e-09!17;UBERON:0000475!1.09e-07!200 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,3.41e-26,64;UBERON:0003075,3.41e-26,64;UBERON:0007284,3.41e-26,64;UBERON:0001017,5.62e-25,73;UBERON:0001016,6.60e-24,75;UBERON:0000073,3.40e-23,54;UBERON:0001049,8.05e-23,52;UBERON:0005068,8.05e-23,52;UBERON:0006241,8.05e-23,52;UBERON:0007135,8.05e-23,52;UBERON:0000955,1.20e-20,47;UBERON:0006238,1.20e-20,47;UBERON:0003056,1.27e-20,49;UBERON:0010371,5.02e-20,73;UBERON:0002616,5.90e-20,46;UBERON:0004121,1.59e-19,95;UBERON:0000924,1.59e-19,95;UBERON:0006601,1.59e-19,95;UBERON:0003080,1.13e-17,40;UBERON:0002780,4.64e-17,39;UBERON:0001890,4.64e-17,39;UBERON:0006240,4.64e-17,39;UBERON:0002020,1.28e-15,34;UBERON:0010314,1.23e-14,92;UBERON:0003528,1.26e-13,29;UBERON:0002791,1.26e-13,29;UBERON:0001893,1.26e-13,29;UBERON:0000956,1.52e-09,21;UBERON:0001869,1.52e-09,21;UBERON:0000203,1.52e-09,21;UBERON:0002619,4.45e-09,17;UBERON:0002021,7.84e-07,10;UBERON:0000411,7.84e-07,10;UBERON:0001950,7.84e-07,10 | |||
|phase1_expression=4.80446541314382,0.348975407639361,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0.0874204024189974,4.66353666541928,3.84703008040669,5.59649502502517,0,0.822686601634433,1.27316895539409,7.22867966284093,3.17731043842833,2.35079810225042,0,0,0,0,0,0,0,0,1.90509202037889,2.46025915033828,0,0.577703239502549,0,0.408338712524738,11.3003540298965,13.2827008569046,13.6116173433188,16.4704816648684,20.4913645487534,17.4783727091215,2.26614272356039,2.43304634926835,0.917733760808408,1.56478268869608,6.75877984779384,5.4921545683618,5.24960727500565,3.3596741190087,8.62515386189829,0.167782606057736,0,0,0.771778308107841,1.71920063963254,1.03134418455488,6.27181028664753,6.87688273053643,9.50747105259269,0.677689064138264,0,0.449949858640699,0,0,2.99600110518405,3.45796474789399,3.11068836925433,3.51015439662396,2.52389953621658,5.99867067247988,4.8591079009355,4.77714116938321,4.12135525378416,3.67687514644008,4.40463523997555,5.2351808614927,5.52983519722476,5.80299666012853,8.32537556781928,7.29278718779464,8.65467296904281,10.1297269805702,10.0846843532695,7.36571463684169,6.12198227436143,6.15118171223492,0.37863096666592,2.11600368298999,5.2175607966302,0,0,0,0,0,2.24711072210803,2.55645483867087,1.55871602761721,2.47337702157238,2.95771181531029,3.84979432242953,2.54805239706646,0,0,0,0,0.91347103775248,0.776813650941515,7.57054909230606,2.60227990149204,3.04465478312141,2.07553947530453,3.16517545160507,5.05631440683531,4.27266410520897,0,1.3013942122792,0,2.42650274921114,3.5334642953663,2.42437626567611,0,11.7112318804619,7.54008144528438,0.766371165625774,0.718890747035522,0,0.381210681219194,10.1857634795279,7.32000964509802,10.5549655774806,9.90798625095976,8.18289463457058,7.89594569326328,9.73447578406546,2.95334155165917,2.36373244159177,1.51633655060205,1.89397670297827,3.3831315170303,6.43725892413724,4.32149111532838,6.48030716693575,8.50456239391598,9.60852902136373,7.68354141389776,5.17406741478031,1.72454394346274,2.26927296201383,2.11141348996739,1.7535658594206,3.61461423993277,3.48252166522167,1.85203922767149,2.7864797354589,1.40442637462647,0,0.568326998791185,1.03562886267751,0.938104239924385,0.540186184383045,0.710234206755631,1.18058539048442,0.617068451549513,0.465067889500816,0.804820204198858,0.583826711835847,1.31647879930784,0.32833492815819,0.486412857275134,0.292399974850665,0.219550115291051,0.536825675041487,11.565947171027,10.496270462687,0,1.58670339998127,2.13288250535234,2.09013004674395,2.19074684247559,1.4117846723634,0.889512175379481,0.951128130562796,1.89811624617805,0.988193728344065,1.25667604400135,0.994782360205754,0.974820435595601,0.898819408654221,1.72910439899755,0.995706366271836,1.89667900953082,1.82797620175566,1.1270773567308,1.83286195060783,1.74557238450863,1.54298803758701,1.51767689098217,1.47610147979602,1.41298855057237,1.72756029490521,0,0.83422552858047,0.589676985339609,1.57403478669398,1.21716072833102,0.482354319504834,0.763877555344259,1.43848068725405,0.324270453550071,1.92192989231657,0,1.11642284300551,0,0.505157755894224,0.179397413521912,0.482443521363367,1.84753190166605,0.757965647081939,1.46668478797823,2.03694102930226,1.64283173801951,1.84256883185997,1.90434912708811,0.975668239288994,1.89162172927429,1.32878813789265,0.956728611944923,1.63863314715738,2.07221978239075,2.74833211304872,0,0,0.983528546038072,0.275936746304732,8.99083303931635,8.67366480782304,1.80328439914343,0.757412781613119,3.15508219416257,2.73307121007647,3.44677436372478,0.955875191810208,1.55959071857676,1.98153571552183,1.21443210502468,3.21481443702443,1.58115111178609,12.2102100240287,4.40014264145633,1.6025904330053,3.09485222771795,4.45419332025846,0,2.42780636154981,2.72091201268276,1.50884063804718,2.06711325016541,2.45948118355142,2.06742634534577,2.54473610634254,5.34746067577082,1.58018378967908,3.16255825724996,2.06271086496374,21.7881347682424,2.88097750450096,3.10460841078611,3.85806663056866,5.14286677562593,6.0645397984704,4.60737257685939,7.61162372786498,0.704015124191131,0,0.882113592219848,0.49465875882444,0.161464426695906,0.663442174209714,0.238744688006273,0.328281799490123,0.291480836629851,11.4963687246516,2.05045056957423,2.88941615148511,1.85194527369712,5.65105371014073,6.42462870288818,3.66045077130436,0.169978429993855,0.839708713941948,0.552799895217695,0.954670618015114,3.16335993581135,1.62655573701479,2.05210147561422,1.46361807210128,1.9652630737156,3.2367443132357,2.14898984885873,1.57053565190418,1.94422459937689,0,24.2387963634202,1.49516546043979,1.15820943319968,6.02798683866548,4.26227417476513,4.22390313726945,5.04636126176742,3.77592716047455,5.13810787685983,12.5623742829523,20.4501304443084,3.47612232690996,0.810900861160657,1.84879722896689,4.80707045017842,4.65469408735452,5.36439657909415,3.96644983415897,4.87375439676105,6.15895344683701,4.80102881926499,3.52891647978942,3.50848370663109,1.82802499116626,3.85693777199178,0,0.221985953374065,0.0897138566094757,0.503653849092235,3.09103350451505,1.3137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| ||
|short_description=p1@9530077C05Rik | |short_description=p1@9530077C05Rik | ||
}} | }} |
Latest revision as of 12:01, 26 September 2015
Short description: | p1@9530077C05Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_9530077C05Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:788 |
Association with transcript: | 0bp_to_ENSMUST00000058868, NM_026739, uc009ool.1, uc009oom.1, uc009oon.1_5end |
EntrezGene: | 9530077C05Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 6.05e-09 | 23 |
neuroblast (sensu Vertebrata) | 6.05e-09 | 23 |
ectodermal cell | 3.48e-08 | 44 |
neurectodermal cell | 3.48e-08 | 44 |
neural cell | 4.08e-08 | 43 |
neuron | 2.72e-07 | 33 |
neuronal stem cell | 2.72e-07 | 33 |
neuroblast | 2.72e-07 | 33 |
electrically signaling cell | 2.72e-07 | 33 |
Ontology term | p-value | n |
---|---|---|
neurectoderm | 3.41e-26 | 64 |
neural plate | 3.41e-26 | 64 |
presumptive neural plate | 3.41e-26 | 64 |
central nervous system | 5.62e-25 | 73 |
nervous system | 6.60e-24 | 75 |
regional part of nervous system | 3.40e-23 | 54 |
neural tube | 8.05e-23 | 52 |
neural rod | 8.05e-23 | 52 |
future spinal cord | 8.05e-23 | 52 |
neural keel | 8.05e-23 | 52 |
brain | 1.20e-20 | 47 |
future brain | 1.20e-20 | 47 |
pre-chordal neural plate | 1.27e-20 | 49 |
ecto-epithelium | 5.02e-20 | 73 |
regional part of brain | 5.90e-20 | 46 |
ectoderm-derived structure | 1.59e-19 | 95 |
ectoderm | 1.59e-19 | 95 |
presumptive ectoderm | 1.59e-19 | 95 |
anterior neural tube | 1.13e-17 | 40 |
regional part of forebrain | 4.64e-17 | 39 |
forebrain | 4.64e-17 | 39 |
future forebrain | 4.64e-17 | 39 |
gray matter | 1.28e-15 | 34 |
structure with developmental contribution from neural crest | 1.23e-14 | 92 |
brain grey matter | 1.26e-13 | 29 |
regional part of telencephalon | 1.26e-13 | 29 |
telencephalon | 1.26e-13 | 29 |
cerebral cortex | 1.52e-09 | 21 |
cerebral hemisphere | 1.52e-09 | 21 |
pallium | 1.52e-09 | 21 |
regional part of cerebral cortex | 4.45e-09 | 17 |
occipital lobe | 7.84e-07 | 10 |
visual cortex | 7.84e-07 | 10 |
neocortex | 7.84e-07 | 10 |